Names & Information
Knowledge of BnaA09G0378800NO:
| Gene Name | BnaA09G0378800NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Brassica rapa] |
| Best Hit (SwissProt) | Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3 |
| NT seq | Len:3423 nt ATGGAGGCTGCCGTTCTATCGAAGCGGCATAGGCTCAAGTATGACGTCTTCCTCAGTTTCAGAGGCAAAGACACGCGTGC TGACTTCGCAGAGCGTCTCTACACGGAGATAAAGAGAGAGGTCAAGATCTTCCGCGACAACGAAGGTATGGAACGAGGGG AAGAGATCAATGCAAGCCTCATCGCAGGCATGGAGGACTCGGCGGCCTCCCTCGTCCTCTTCTCCCCTCACTACGCTGAC TCCCGCTGGTGCCTAGATGAGTTAGCTACGCTCTGTGATCTGAGTTCATCTCTCGATCGTCCCATGATACCCATCTTTTA CAAGGTAGATCCCTCCCATGTACGCAAGCAGAGCGGTGATTTCGTGAAGCATTTTGAAGCACACGCCGAAAGATTTAGCA AGGAAAGGATACAGCCATGGAGAGAAGCTATGAAACTAGTTGGACATCTCCCTGGCTTTATTTACAGAGAAGGAGAAAAT GAGGATGCGCTGATAAGGCTTGTGGTGAAGAGGGTTTTAGCTGAGAAGAACAATACACCAGAGAAAGTTGGAGAGTACAC CGTTGGCTTGGAGTCACGTGTTGATGATTTGATGAATCTGGTCAACGTTAAATCTAGTTGTGACGTTCAAATCCTGGGGC TTTACGGTATGGGCGGTATTGGGAAGACGACCCTTGCAAAAGCCTTGTACAAAAAGATGGTAGAATACTTCAAGGAGCAA CGAGTTTTCATCTCAAACGTTAGAGAAAGATCATCAGGAAAAGATGGCTTACTCAATCTAGAAAAGACTTTGATAACTGA ACTGTTTGATTCGCCACCTGAAATAGAAGATGTTGACCAAGGCCGAGACAAGATAAGAGAAAGTGTTCATGAGAAGAAGA TTCTTGTGGTTTTAGATGATGTTGATAACGTAGACCAGGTTAATGCGTTGGTTGGTGAGAGAAGTTGGTATGGTGAAGGA AGTCTTATAGTCATCACTACCAGAGACGAAGATATTCTGAATAGTCTCTCTGTGAGCCTAAAGTATGAGGTCAACTGCTT GAGTGAAGAGCAAGCAGTGAAGCTGTTTAGTTATCATTCACTACGAAAGGAAAAACCAACAGGGAGTCTATTGAAGTTAT CTGAGAATATCGTCAAGATAACTGGATTGTTGCCACTAGCTGTTGAAGTGTTTGGTTCTCTTTTTTATGACAAAAAGGAA AAGGAATGGCAAGTTCAGGTAAAGAAGCTGGAAAATACTAAACCCAACGGTCTTCGGGACGTTCTGAAGGTGAGTTTTGA CTCTTTAGACGATGAAGAGAAGAAAGTCTTCCTGGACATTGCGTGTCTCTTTCTTAAAATGGACATGACTAAAGAGGAAA TTGTCGACGTACTGAAAGGTTGTGGGTTCAACGCTGAGGCTGTTCTCAAAGCTCTTAGACAGAAGTCTCTTGTCAAGTTC TTGGCCGACAATACTCTTTGGATGCATGATCAGATTAAAGACATGGGAATGCAGATGGTCGTTAAAGAAAGCCCTGAGGA TCCGGGAAAGCGAAGTAGACTCTGGGATCGTGGTGAAATCATGAACAATATGAAGGGAACACCATCCATCAGAGGAATTG TATTAAACTTCAAGAAGAAGTCTATGAGACTAGATGACGATCCAGGCACCAGCTCTATATTAAAGCCTACAAGTACTGAA AACACCATTCCCGTGGAGCATTTTGTACCAATGAAGAAGCTGAGACTTCTTCAGATCAATCATGTGGAACTGCAAGGAAA TCTTGAACTCCTTCCATCTGACCTCAAGTGGATACAGTGGAGAGGCTGTCCATTAAAAGATGTTCCAGCGAGTTTTCTTT CTAGGCAACTCGCTGTTCTTGATCTTTCAGAGAGTGGTATAAGACGATTCCAGAGTTTCCAGCCAAAAATAGTGGGTTTG CAGGTGGAGGGGAACTTGAAGGTTGTAAATTTGCGTGGTTGTGATAGCTTAGAAGCCATTCCTGATTTATCAAACCATAA GTCCTTAGAGAAGCTTGTTTTCGAGGGATGCAAGCTTCTGGTGGAGGTTCCTAGCTCAGTTGGTAATTTGAGATCATTAC TTCACCTGGATTTAAGAAACTGTCCAAACCTCACTGAGTTTCTTGTGGATGTTTCTGGACTGAAGAGTCTTGAAAAGCTT TACCTCTCTGGCTGTTCAAGTCTGAGTGTGTTACCAGAAAACATCGGTTACATGCTGTGTTTGAAAGAGCTTCTTCTTGA TGAAACTGCGATAAAGAACCTACCGGGATCAATTTTTCGCCTCGAAAAACTTCAAAAGCTTAGCTTAAAGAGTTGCAGAT CTATTCACGAGCTTCCTGAGTGCATAGGAACATTGACATCACTGGAAGAGCTAGATCTGAGTAGCACTTCACTGCAAAGT CTTCCGAGTTCTATTGGAAATTTAAAAAATCTCCAGAAGCTGCATGTGATGCACTGTGCATCCCTTTCTAAGATACCTGA CACTATCAATAAACTCGCATCATTACAAGAGCTGATCATCGATGGAAGTGCGGTGGAGGAGCTACCTCTAAGTCTAAAAC CTGAATCCCTTTCTAAGATACCTGACACTATCAATAAACTCGCATCATTACAAGAGCTGATCATCGATGGAAGTGCGGTG GAGGAGCTACCTCTAAGTCTAAAACCTGTATCACTGCCATGTTTGGCTAAATTTTCAGCAGGAGGATGCAAATCGCTGAA ACAGGTTCCTAGTTCAGTTGGGTGGTTAAACTCTCTTCTCCAACTTAAGTTGGATAGTACACCGATTACAACTCTACCAG AAGAGATAAGTCAGTTGCGCTTTATTCAGAAAGTTGAGTTGAGGAACTGCTTATCATTGAAATCTCTGCCTAATAAGATT GGAGATATGGACACACTCCATAGCTTATACCTTGAAGGCTCTAACATTGAAGAACTGCCTGAAAATTTTGGAAATCTGGA GAACCTAGTATTACTCCAAATGAACAAGTGTAAGAATCTCAAGAAGCTTCCTAACTCATTTGGAGGCTTGAAATCTCTTT GCCATCTGTACATGGAGGAAACTCTGGTCATGGAGTTGCCAGAAAGTTTTGGAAACCTCTCAAATTTAAGGATACTGAAC TTGGGGAATAATAAGTTTCACAGTCTTCCTTCTAGCTTCAAGGGGTTATCAAGTCTCAAAGAACTTTCATTGTGTGACTG CCAAGAGCTCACGTGTCTTCCCTCTCTTCCATGTAACTTGGAGAAGCTAAACCTGGCAAACTGCTGCTCATTGGAGAGTA TATCCGACCTTTCAGAGCTGACGATGTTGCACGAGCTCAATCTCACCAACTGTGGGATAGTGGATGATATTCCAGGCCTA GAGCACTTGACGGCGCTGAAACGGTTAGACATGAGCGGATGTAATTTCCAAGTGCACCGTTGA |
| AA seq | Len:1141 aa MEAAVLSKRHRLKYDVFLSFRGKDTRADFAERLYTEIKREVKIFRDNEGMERGEEINASLIAGMEDSAASLVLFSPHYAD SRWCLDELATLCDLSSSLDRPMIPIFYKVDPSHVRKQSGDFVKHFEAHAERFSKERIQPWREAMKLVGHLPGFIYREGEN EDALIRLVVKRVLAEKNNTPEKVGEYTVGLESRVDDLMNLVNVKSSCDVQILGLYGMGGIGKTTLAKALYKKMVEYFKEQ RVFISNVRERSSGKDGLLNLEKTLITELFDSPPEIEDVDQGRDKIRESVHEKKILVVLDDVDNVDQVNALVGERSWYGEG SLIVITTRDEDILNSLSVSLKYEVNCLSEEQAVKLFSYHSLRKEKPTGSLLKLSENIVKITGLLPLAVEVFGSLFYDKKE KEWQVQVKKLENTKPNGLRDVLKVSFDSLDDEEKKVFLDIACLFLKMDMTKEEIVDVLKGCGFNAEAVLKALRQKSLVKF LADNTLWMHDQIKDMGMQMVVKESPEDPGKRSRLWDRGEIMNNMKGTPSIRGIVLNFKKKSMRLDDDPGTSSILKPTSTE NTIPVEHFVPMKKLRLLQINHVELQGNLELLPSDLKWIQWRGCPLKDVPASFLSRQLAVLDLSESGIRRFQSFQPKIVGL QVEGNLKVVNLRGCDSLEAIPDLSNHKSLEKLVFEGCKLLVEVPSSVGNLRSLLHLDLRNCPNLTEFLVDVSGLKSLEKL YLSGCSSLSVLPENIGYMLCLKELLLDETAIKNLPGSIFRLEKLQKLSLKSCRSIHELPECIGTLTSLEELDLSSTSLQS LPSSIGNLKNLQKLHVMHCASLSKIPDTINKLASLQELIIDGSAVEELPLSLKPESLSKIPDTINKLASLQELIIDGSAV EELPLSLKPVSLPCLAKFSAGGCKSLKQVPSSVGWLNSLLQLKLDSTPITTLPEEISQLRFIQKVELRNCLSLKSLPNKI GDMDTLHSLYLEGSNIEELPENFGNLENLVLLQMNKCKNLKKLPNSFGGLKSLCHLYMEETLVMELPESFGNLSNLRILN LGNNKFHSLPSSFKGLSSLKELSLCDCQELTCLPSLPCNLEKLNLANCCSLESISDLSELTMLHELNLTNCGIVDDIPGL EHLTALKRLDMSGCNFQVHR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | - |
| KEGG | leucine-rich repeat-containing protein, putative; K19613 leucine-rich repeat protein SHOC2 (A) |