Names & Information
Knowledge of BnaA09G0432200GG:
| Gene Name | BnaA09G0432200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaCnng64090D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2 |
| NT seq | Len:2718 nt ATGGGAAGTTGTTTATCGGTCTCCATGCCATGTGATCAAGTTGTGAATCAAGTCTCTCAATGTTTATCCGACAAAGGAAG TTACATCTACGACCTTTCCATGAATCTAGCGGCTCTGGAGAAAGACATGGAAGTCCTCAAGGCAAAGCGTGATGATGTGC AAGGAAGGGTGAACAGAGAAGAGTTTACAGGATGTCGTCAAAGACTTGCTGAAGTCCAGGTATGGCTTAAGAATGTCCTC GACATAGAAGATGAATTTAAAGATCTATTTAGTACTAGTACCGTTGAACTCCAAAGGTTGTGTTGCTGTGGATTATGCTC CAAAAATGTGGAAATGAGCTACAGTTATGGCAAAAGAGTAATCCGGATGTTGAAAATAGTTAAGAGTACCAGTTCTGAAG GAAAATTTGATGTGGTGACTGAGAAAGTTCAAGTAACTGAGGTTGAAGAGATGCCTATTCAACCCACAATTGTTGGTCAT GAGGCATTGCTTGAGAGGGTATGGAACCGTCTAATGGACGATGGAGTTGGGGTTTTGGGTTTGTATGGTATGGGTGGAGT TGGCAAAACCACTATTCTTGCGCAGATCAACAATAAGTTTACTAAAGCAAGGGGCAGCTTTCATGTTGTGATATGGGTTG TGGTGTCAAAGAATTTAGACATTCATAACGTTCAAGAAGACATAGCAAAAAAACTAGGACTTTGGAATGAGGAGTGGGAT AAGAAGAACGAGAACCGTAGAGCCCTTGACATACACAACGTTCTCAAGAGACGGAAGTTTGTGTTGTTCTTGGATGATAT ATGGGCGAAAGTGAATTTGCCGACCATTGGAGTCCCTTATCCGGATGTAGTAAATGGATGCAAAGTAGCTTTCACCACTC GCTCTAGAGACGTGTGTGGACGCATGGAGGTTGATGAACTGATGGAAGTCAGTTGTCTAGGCCCCGACAAAGCATGGGAG TTGTTCCAAAAGAAAGTTGGAGAAAGCACATTGAAAATCCATGCAGACATTCCTGATCTCGCTAGACAAGTCGCTGGAAA ATGTTCTGGCTTACCACTGGCGCTCAACGTAATCGGGGAAACTATGTCATGCAAAAGTACGGTACAAGAATGGCGACGTG CAGTGGACGTTTTGACTTTATCGGCTGCAGATTTTTCAGGCATGAAAGATGAAATCCTTTCTGTTCTCAAGTATAGCTAT GACAGTTTAAATGGAGAGGTGGTGAAATCATGTTTTCTTTATTGCTCTCTATTTCCTGAAGATTATCTTATAGATAAAGA GAGACTGGTGGATTATTGGATATGTGAGGGATTCATAGATGAAAGCCAAAGTAGAGAAAGGGCTATAAACCAAGTATATG AGATACTTGGCACCCTTGTCCGCGCATGTTTATTGGTCGAAGGAGAAATGAATAATATATCATATGTGACTATGCATGAT GTGGTTCGTGACATGGCTCTATGGATCGCATCTGATCTTGGAAAGGATAAGGAGATATACATTGTGCAAGCCGGTGTTGA TTTACGCAATATGCCAGATGTCAAGAATTGGAAGGGTGTTAAAAAGATGTCACTGATGCGTAACAATATTGAAAGGATAT GTGGCAGCCATGAGTGCGCTCAACTTACAACTTTGTTCCTTCAGAACAACCAATCACTGGTACATGTTTCCAGTGACTTC TTCAAGTATGTTCCAGCGCTAGTTGTGTTGGATCTGTCAGGCAATTTAGGCCTTTCTGAGTTACCACAGCTTCAGTTGAT ATCGTTGCGGTATCTTGATTTGTCACGAACAAGCTTGGAGCAATTTCATGTTGGGTCACAAGAGTTGACAAAGCTAATCC ACTTGAATCTCGAGTCCACACGGAAGCTTAAGAGCATTTCAGGGATAGCAAATTTGTCAAGTTTGAGGTCACTTGGACTA GAAGGATCCAACAAGACGCTAGACGTGAGCTTACTGAAAGAGCTGCAACTTGTGGAGTATCTAGAAAATTTAACCATTGA GGTCAGTTCAGGGATGGTTTTGGAGCAATTGTTAAGCTGTCACGTGTTGGTAAAATGCATTCAAAAGATGGGATTAAATA ACCTTGGAGAATCAACGAGAATATTGACTTTGCCAACTATGTGTGTTCTACGTAGGCTCAACGTATCAGGATGCAGAATG GGGGAAATACAGATTGAGAGGACAACTCCAAGTTTCCAAAACCTCTCCCGAATCGATATATGTGTTTGCTATCGTCTAAA GGATTTGACGTGGCTGGTGTTTGCTCCAAACCTTGTTGATCTTAGAGTTAAATACTCAAATCAATTGGAAGAGATTATAA ACGAGGAAGTAGCTGCAAGGGTTGCAGGAGGACGTGTTCCTTTTCAAAAACTAAGAAGCCTCAACTTATCTCATTCACCT ATGTTAAAGAGCATATACTGGAGTCCTCTATCTTTTCCATGTTTAAGCAAAATCAGCATTGCAGGTTGTCCAATGCTGAG ACAGCTTCCACTGGATTCTGATAGTGTCGTCAGGTTTGAAGTATTTTCAATAGAATACAGAGAGGAAGAGTGGATCAAAG AGGTTGATTGGAAAGACGAAGCTACTCAACTGCGTTTCTTGCCTTTCTGTAAGCTTGGCCCTGACCCGACAGTAACTCCA AATAAATATAATAGCCAGACTCGTTCGATAAACAGTGTAGTTGGTGTAAGGCATCAGCCAGTTAATCATTATTCTTAA |
| AA seq | Len:906 aa MGSCLSVSMPCDQVVNQVSQCLSDKGSYIYDLSMNLAALEKDMEVLKAKRDDVQGRVNREEFTGCRQRLAEVQVWLKNVL DIEDEFKDLFSTSTVELQRLCCCGLCSKNVEMSYSYGKRVIRMLKIVKSTSSEGKFDVVTEKVQVTEVEEMPIQPTIVGH EALLERVWNRLMDDGVGVLGLYGMGGVGKTTILAQINNKFTKARGSFHVVIWVVVSKNLDIHNVQEDIAKKLGLWNEEWD KKNENRRALDIHNVLKRRKFVLFLDDIWAKVNLPTIGVPYPDVVNGCKVAFTTRSRDVCGRMEVDELMEVSCLGPDKAWE LFQKKVGESTLKIHADIPDLARQVAGKCSGLPLALNVIGETMSCKSTVQEWRRAVDVLTLSAADFSGMKDEILSVLKYSY DSLNGEVVKSCFLYCSLFPEDYLIDKERLVDYWICEGFIDESQSRERAINQVYEILGTLVRACLLVEGEMNNISYVTMHD VVRDMALWIASDLGKDKEIYIVQAGVDLRNMPDVKNWKGVKKMSLMRNNIERICGSHECAQLTTLFLQNNQSLVHVSSDF FKYVPALVVLDLSGNLGLSELPQLQLISLRYLDLSRTSLEQFHVGSQELTKLIHLNLESTRKLKSISGIANLSSLRSLGL EGSNKTLDVSLLKELQLVEYLENLTIEVSSGMVLEQLLSCHVLVKCIQKMGLNNLGESTRILTLPTMCVLRRLNVSGCRM GEIQIERTTPSFQNLSRIDICVCYRLKDLTWLVFAPNLVDLRVKYSNQLEEIINEEVAARVAGGRVPFQKLRSLNLSHSP MLKSIYWSPLSFPCLSKISIAGCPMLRQLPLDSDSVVRFEVFSIEYREEEWIKEVDWKDEATQLRFLPFCKLGPDPTVTP NKYNSQTRSINSVVGVRHQPVNHYS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | probable disease resistance protein At1g12280; K13459 disease resistance protein RPS2 (A) |