Names & Information
Knowledge of BnaA09G0455400QU:
| Gene Name | BnaA09G0455400QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 isoform X1 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3387 nt ATGAAAGAATGCATGGACAAAGGTCAACTCCTCATCATTCCCATCTTTTACAAGGTTCAAGCATACGAAGTTCGGTTTCA GAGGGGACGGTTCGGTTATTTGTTTAACAAGTTGCGCCATGTTGACGTTGACAAGAAGAAGCAGTGGTCTGAAGCTTTGA ACTCTGTCGCTGACCGAATAGGCTTCTGCTTCGACGGAAAGAGCGACGAAAACAAGTTCATCCACAGTATCGTCGAAAAG GTTAAGCAAGCGCTGAGAAAAATTCAGTTGGATGAAAGCAAAGGCAACTCTGTTTTTCTTTCAAAAAACACTTCGTTGCG CTTAGGAAGAGAAAACAATGAGATTTATGGACTCAAGCAACGCTTGGACGAATTGGAGGAGAAGTTTGATCTTGACTGTC AGGAGACTCGATATTTGGGAGTTGTTGGGATGCCAGGCATTGGTAAAACCACTCTTGCAAGGGAGTTATATGAAACTTGG CAGTGCAAATTCGTAAGTCACGTGTTAATCCAAGATATTCGTAGAACTTCCAAGGAGCTTGGGTTGGATTGCTTGCCTGC ATTACTCTTGGAAGAATTACTCGGTGTAAGAAATTCAGACGTAAAATCTTCTCAAGGCGCCTACGAATCCTACAAGAGTG AACTACTCAAACATAAAGTTCTCGTTGTTCTCGACGATGTGAGTGACAGAAAGCAGATAGAGGTTCTTCTGGGGAGTTGC GACTGGATTAGGCAGGGAAGTAGAATTGTCATTTCAACAAGCGACAAGTCACTAATCCAAGATGTTGTCGACTATACTTA TGTTGTCCCACAGTTAAACCACAAAGACGGACTAGGTCACTTTGGGCGTTATGCCTTTGACCATCATTCCAGCAAACACA ACAATGAAGTCATCATGAAGCTATCAAAAGAGTTTGTGCATTATGTTAGAGGTCATCCGCTAGCTCTTAAGTTGTTGGGC GCAGATCTTAATGGGAAAGACGAGGGCTATTGGAAAACAATACTGGCAACACTCTCCCAAAGTTCCTGCCCGTGTATTCG AGATGTGTTGGAAGAAAGCTATAATGAGTTGAGTCAAGAGCACAAAGAGATATTTCTCGACATGGCTTGTTTTAGAAGGG AAGATGAGAGTTACGTTGCAAGTTTACTGGATACATCTGAAGCCGCAAGAGAAATAAAAACTCTCATAAACAAATTCATG ATAGATGTTTCTGATGGGCGAGTAGAGATGCATGATTTACTATATACCTTCGCCAAGGAGATTTGCCGAAGAGCACATGC TCAAGATGGAAAGGGGGGACATAGGTTGTGGCATCACCAAGATATCATTGATGTACTAAAGAACATAGAGGAAGGCGAGA AAGTTAGAGGGATTTTCCTAAACATGAATGAAATGAAGAGGGAGATGAGCTTAGACAGTTGCACCTTTGAACCAATGCTC GGTCTCAGATACCTCAAGATCTATAGCTCAGGCTGTCCTGAGCAATGCAGACCTAACAATAAGATAAACCTCCCTGATGG ACTAAACTTTCCTGTGGAAGAGGTTCGGTATCTCCACTGGCTGGAGTTCCCATTGAAAGAACTTCCACCAGATTTCAACC CTCGCAATCTTGTGGACCTTAAGCTTCCTTACAGCAAGATTGAACGAATCTGGAGTGATGATAAGGATACATCAAAATTG AAGTGGGTCAATCTCAACCATTCCAGTAACTTGCGCGTCTTGTCAGGATTATCAAAGGCTCAAAATCTGCAAAGATTGAA CCTTGAAGGCTGCACAAAAATGGAAACTTTACCCCATGATATGCAACATATGAGAAGTCTTCTTGTCCTGAACCTGAACG GGTGCACAAGTCTCAACTCTCTTCCGGAAATAAGTTTGGTGTCACTAGAAACTCTCATCCTCAGCAACTGCTCAAACCTG AAGGAATTCCGGGTGATCTCACAAAATCTAGAAGCTCTATACTTGGATGGCACTTCAGTGAAAAAACTCCCTCTGGATAT CAAAATACTGAAGAGACTTGCCTTGTTGAATATGAAAGGATGCACGAAGCTGAAGGAATTTCCTGATTGTCTTGATGACT TGAAAGCTCTCAAGGAATTGATACTCTCAGATTGCTCGAAGCTCCAACAATTTCCTGCAAACGGCGAAAGCATCAAGGTT TTAGAGACATTGCGATTGGATGCGACAGGCTTAACTGAGATTCCGAAGATATCCTCCTTACAGTGTTTATGCTTAAGCAA GAATGATCAGATCATCTCCCTTCCAGATAACATCAGTCAACTCTATCAACTAAAATGGTTGGACTTGAAGTATTGCAAGA GTCTTACATCTATTCCAAAGCTTCCACCAAATCTTCAGCACTTTGATGCACATGGCTGTTGCTCACTTAAAACAGTCTCG AATCCACTGGCATGTCTTACGACAACTCAACAGATCTGTTCCACGTTCATATTCACGAGCTGCAACAAACTTGAGATGAG TGCGAAGAAAGATATATCTTCCTTTGCTCAAAGGAAATGCCAGCTGCTTTCAGATGCACAAAACTGCTGCAATGTTTCGG ATTTGGAGCCTTTGTTCAGTACTTGCTTTCCTGGAAGTGAACTACCTTCATGGTTAGGTCATGAAGCCGTTGGATGTATG TTAGAGCTCAGAATGCCCCCACATTGGCGCGAAAATAAGCTTGCCGGTCTAGCTTTATGTGCTGTTGTCTCATTTCCAAA CTCCCAGGTACAAATGAAGTGTTTTTCGGTGAAATGCACACTGAAGATAGAAGTAAAAGAAGGGTCGTGGATCGACTTTT CTTTCCCAGTTGGAAGTTTGAGAAATCAGGACAATGTTGTAGAGAATACTGCGTCACCAGAGCATATCTTTATTGGTTAT ATCAGCTGTTCAAAGATCTTTAAACGTCTTGAAAGCCAGCATTTTATCAGCCCTGATCCTACGAAGTCCACTCTATCTAG TAAATGTAGTCCTACCAAGGCCTCCTTTAAATTCACGGTCACAGATGGTACGAGCGAGATACCGGGGCTCGAAGTGCTCA AGTGTGGCTTAAGGTTTTTTATAGGTGGTGAGAGCAGTGGAGATTGTTTAAAGAAGTTGGAAGTGAAAGATGCTGAACAG AATCCAAGTGCACAAAAGTTATCAGATAATTGGACGAGTGAATCAGATACCACTACTGAGGTTGCTGTTTCGCCTGAAAA TGCAAACAGTGCAGAACAGAGCCCAGAGACGGTTACAACAGCGGTTACGGCTTCACCAGAAAAAGCTAACAGTGCAGAAT TTCAAATGGAAATCTCCACAACCCCACGTGAAGGTCAACCACGCCCATATATAAAAACTTCGAAATGGGTATGCTTTGCT TGTTTTGACTCCAGAAAACATCCATGA |
| AA seq | Len:1129 aa MKECMDKGQLLIIPIFYKVQAYEVRFQRGRFGYLFNKLRHVDVDKKKQWSEALNSVADRIGFCFDGKSDENKFIHSIVEK VKQALRKIQLDESKGNSVFLSKNTSLRLGRENNEIYGLKQRLDELEEKFDLDCQETRYLGVVGMPGIGKTTLARELYETW QCKFVSHVLIQDIRRTSKELGLDCLPALLLEELLGVRNSDVKSSQGAYESYKSELLKHKVLVVLDDVSDRKQIEVLLGSC DWIRQGSRIVISTSDKSLIQDVVDYTYVVPQLNHKDGLGHFGRYAFDHHSSKHNNEVIMKLSKEFVHYVRGHPLALKLLG ADLNGKDEGYWKTILATLSQSSCPCIRDVLEESYNELSQEHKEIFLDMACFRREDESYVASLLDTSEAAREIKTLINKFM IDVSDGRVEMHDLLYTFAKEICRRAHAQDGKGGHRLWHHQDIIDVLKNIEEGEKVRGIFLNMNEMKREMSLDSCTFEPML GLRYLKIYSSGCPEQCRPNNKINLPDGLNFPVEEVRYLHWLEFPLKELPPDFNPRNLVDLKLPYSKIERIWSDDKDTSKL KWVNLNHSSNLRVLSGLSKAQNLQRLNLEGCTKMETLPHDMQHMRSLLVLNLNGCTSLNSLPEISLVSLETLILSNCSNL KEFRVISQNLEALYLDGTSVKKLPLDIKILKRLALLNMKGCTKLKEFPDCLDDLKALKELILSDCSKLQQFPANGESIKV LETLRLDATGLTEIPKISSLQCLCLSKNDQIISLPDNISQLYQLKWLDLKYCKSLTSIPKLPPNLQHFDAHGCCSLKTVS NPLACLTTTQQICSTFIFTSCNKLEMSAKKDISSFAQRKCQLLSDAQNCCNVSDLEPLFSTCFPGSELPSWLGHEAVGCM LELRMPPHWRENKLAGLALCAVVSFPNSQVQMKCFSVKCTLKIEVKEGSWIDFSFPVGSLRNQDNVVENTASPEHIFIGY ISCSKIFKRLESQHFISPDPTKSTLSSKCSPTKASFKFTVTDGTSEIPGLEVLKCGLRFFIGGESSGDCLKKLEVKDAEQ NPSAQKLSDNWTSESDTTTEVAVSPENANSAEQSPETVTTAVTASPEKANSAEFQMEISTTPREGQPRPYIKTSKWVCFA CFDSRKHP* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |