Names & Information

Knowledge of BnaA09G0468900ZS:

Gene Name
BnaA09G0468900ZS
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaCnng64090D [Brassica napus]
Best Hit (SwissProt)
Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2
NT seq
Len:2718 nt

ATGGGAAGTTGTTTATCGGTCTCCATGCCATGTGATCAAGTTGTGAATCAAGTCTCTCAATGTTTATCCGACAAAGGAAG
TTACATCTACGACCTTTCCATGAATCTAGCGGCTCTGGAGAAAGACATGGAAGTCCTCAAGGCAAAGCGTGATGATGTGC
AAGGAAGGGTGAACAGAGAAGAGTTTACAGGATGTCGTCAAAGACTTGCTGAAGTCCAGGTATGGCTTAAGAATGTCCTC
GACATAGAAGATGAATTTAAAGATCTATTTAGTACTAGTACCGTTGAACTCCAAAGGTTGTGTTGCTGTGGATTATGCTC
CAAAAATGTGGAAATGAGCTACAGTTATGGCAAAAGAGTAATCCGGATGTTGAAAATAGTTAAGAGTACCAGTTCTGAAG
GAAAATTTGATGTGGTGACTGAGAAAGTTCAAGTAACTGAGGTTGAAGAGATGCCTATTCAACCCACAATTGTTGGTCAT
GAGGCATTGCTTGAGAGGGTATGGAACCGTCTAATGGACGATGGAGTTGGGGTTTTGGGTTTGTATGGTATGGGTGGAGT
TGGCAAAACCACTATTCTTGCGCAGATCAACAATAAGTTTACTAAAGCAAGGGGCAGCTTTCATGTTGTGATATGGGTTG
TGGTGTCAAAGAATTTAGACATTCATAACGTTCAAGAAGACATAGCAAAAAAACTAGGACTTTGGAATGAGGAGTGGGAT
AAGAAGAACGAGAACCGTAGAGCCCTTGACATACACAACGTTCTCAAGAGACGGAAGTTTGTGTTGTTCTTGGATGATAT
ATGGGCGAAAGTGAATTTGCCGACCATTGGAGTCCCTTATCCGGATGTAGTAAATGGATGCAAAGTAGCTTTCACCACTC
GCTCTAGAGACGTGTGTGGACGCATGGAGGTTGATGAACTGATGGAAGTCAGTTGTCTAGGCCCCGACAAAGCATGGGAG
TTGTTCCAAAAGAAAGTTGGAGAAAGCACATTGAAAATCCATGCAGACATTCCTGATCTCGCTAGACAAGTCGCTGGAAA
ATGTTCTGGCTTACCACTGGCGCTCAACGTAATCGGGGAAACTATGTCATGCAAAAGTACGGTACAAGAATGGCGACGTG
CAGTGGACGTTTTAACTTTATCGGCTGCAGATTTTTCAGGCATGAAAGATGAAATCCTTCCTATTCTCAAGTATAGCTAT
GACAGTTTAAATGGAGAGGTGGTGAAATCATGTTTTCTTTATTGCTCTCTATTTCCTGAAGATTATCTTATAGATAAAGA
GAGACTGGTGGATTATTGGATATGTGAGGGATTCATAGATGAAAGCCAAAGTAGAGAAAGGGCTATAAACCAAGTATATG
AGATACTTGGCACCCTTGTCCGCGCATGTTTATTGGTCGAAGGAGAAATGAATAATATATCATATGTGACTATGCATGAT
GTGGTTCGTGACATGGCTCTATGGATCGCATCTGATCTTGGAAAGGATAAGGAGATATACATTGTGCAAGCCGGTGTTGA
TTTACGCAATATGCCAGATGTCAAGAATTGGAAGGGTGTTAAAAAGATGTCACTGATGCGTAACAATATTGAAAGGATAT
GTGGCAGCCCTGAATGCGCTCAACTTACAACTTTGTTCCTTCAGAAAAACCAATCACTGGTACATGTTTCCAGTGACTTC
TTCAAGTATGTTCCAACGCTAGTTGTGTTGGATCTGTCAGGCAATTTAGGCCTTTCTGAGTTACCACAGCTTCAGTTGAT
ATCGTTGCGGTATCTTGATTTGTCACGAACAAGCTTGGAGCAATTTCATGTTGGGTCACAAGAGTTGACAAAGCTAATCC
ACTTGAATCTCGAGTCCACACGGAAGCTTAAGAGCATTTCAGGGATAGCAAATTTGTCAAGTTTGAGGTCACTTGGACTA
GAAGGATCCAACAAGACGCTAGACGTGAGCTTACTGAAAGAGCTGCAACTTGTGGAGTATCTAGAAAATTTAACCATTGA
GGTCAGTTCAGGGATGGTTTTGGAGCAATTGTTAAGCTGTCACGTGTTGGTAAAATGCATTCAAAAGATGGGATTAAATA
ACCTTGGAGAATCAACGAGAATATTGACTTTGCCAACTATGTGTGTTCTACGTAGGCTCAACGTATCAGGATGCAGAATG
GGGGAAATACAGATTGAGAGGACAACTCCAAGTTTCCAAAACCTCTCCCGAATCGATATATGTGTTTGCTATCGTCTAAA
GGATTTGACGTGGCTGGTGTTTGCTCCAAACCTTGTTGATCTTAGAGTTAAATACTCAAATCAATTGGAAGAGATTATAA
ACGAGGAAGTAGCTGCAAGGGTTGCAGGAGGACGTGTTCCTTTTCAAAAACTAAGAAGCCTCAACTTATCTCATTCACCT
ATGTTAAAGAGCATATACTGGAGTCCTCTATCTTTTCCATGTTTAAGCAAAATCAGCATTGCAGGTTGTCCAATGCTGAG
ACAGCTTCCACTGGATTCTGATAGTGTCGTCAGGTTTGAAGTATTTTCAATAGAATACAGAGAGGAAGAGTGGATCAAAG
AGGTTGATTGGAAAGACGAAGCTACTCAACTGCGTTTCTTGCCTTTCTGTAAGCTTGGCCCTGACCCGACAGTAACTCCA
AATAAATATAATAGCCAGACTCGTTCGATAAACAGTGTAGTTGGTGTAAGGCATCAGCCAGTTAATCATTATTCTTAA
AA seq
Len:906 aa

MGSCLSVSMPCDQVVNQVSQCLSDKGSYIYDLSMNLAALEKDMEVLKAKRDDVQGRVNREEFTGCRQRLAEVQVWLKNVL
DIEDEFKDLFSTSTVELQRLCCCGLCSKNVEMSYSYGKRVIRMLKIVKSTSSEGKFDVVTEKVQVTEVEEMPIQPTIVGH
EALLERVWNRLMDDGVGVLGLYGMGGVGKTTILAQINNKFTKARGSFHVVIWVVVSKNLDIHNVQEDIAKKLGLWNEEWD
KKNENRRALDIHNVLKRRKFVLFLDDIWAKVNLPTIGVPYPDVVNGCKVAFTTRSRDVCGRMEVDELMEVSCLGPDKAWE
LFQKKVGESTLKIHADIPDLARQVAGKCSGLPLALNVIGETMSCKSTVQEWRRAVDVLTLSAADFSGMKDEILPILKYSY
DSLNGEVVKSCFLYCSLFPEDYLIDKERLVDYWICEGFIDESQSRERAINQVYEILGTLVRACLLVEGEMNNISYVTMHD
VVRDMALWIASDLGKDKEIYIVQAGVDLRNMPDVKNWKGVKKMSLMRNNIERICGSPECAQLTTLFLQKNQSLVHVSSDF
FKYVPTLVVLDLSGNLGLSELPQLQLISLRYLDLSRTSLEQFHVGSQELTKLIHLNLESTRKLKSISGIANLSSLRSLGL
EGSNKTLDVSLLKELQLVEYLENLTIEVSSGMVLEQLLSCHVLVKCIQKMGLNNLGESTRILTLPTMCVLRRLNVSGCRM
GEIQIERTTPSFQNLSRIDICVCYRLKDLTWLVFAPNLVDLRVKYSNQLEEIINEEVAARVAGGRVPFQKLRSLNLSHSP
MLKSIYWSPLSFPCLSKISIAGCPMLRQLPLDSDSVVRFEVFSIEYREEEWIKEVDWKDEATQLRFLPFCKLGPDPTVTP
NKYNSQTRSINSVVGVRHQPVNHYS*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0005515
Pfam
Leucine Rich Repeat
KEGG
probable disease resistance protein At1g12280; K13459 disease resistance protein RPS2 (A)