Names & Information
Knowledge of BnaA09G0479900ZS:
| Gene Name | BnaA09G0479900ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3249 nt ATGTTCTCTCTCTCTATCTTCTCTCTCGACGATGCCGGCTTCTGCGTCTCTCTCGATGAGTCCGTCGCGTGTCTGAGTCC GTCATCTCTCTCGTTCGGTCCGGCTTCTCCGTCCCTCCATCTTCTCTCTCGCTCCGTCCCTGTGTCTTCTCTGTCAATCG GTGATCGGAAACGGTTCCACTTCCTCCCGAAGCTTCTCTTCCGGCAGCTCTCCGAGACAGAGTCCTCCCCTTTTACGTAT CTTCTCGCCGACGTCTCTCATCCGAATGATGACGCGAAAATGGTCGAAGATATTACCACCGAAATTCTGAACACATTGAT TAATTCCACGCCATCAAGAGATTTCGACGGCTTAGTTGGGATGGGAGCTCATATGGAGAAGATAGAACCCTTGTTACGCC CAGATTTGGAAGAAGAAGTGAGGATGATAGGGATTTGGGGGCCGCCTGGTATTGGCAAGACCACCATTGCCAGATTTTTG TTTCACCAACTATCTTCCAATAATGACAACTTCCAACATACCGTATTTGTGGAGAACGTCAAAGCAATGTATACAACAAT ACCAGTTTCTTCAGATGACTACAATGCGAAGTTGCATCTGCAGCAAAGTTTCCTTTCTAAAATAATCAAGAAGGATATAG AAATCCCACATTTAGGAGTTGCACAAGACACGTTGAAAGACAAGAAAGTTCTAGTTGTTCTTGATGACGTTAATCGGTCA GTACAACTAGATGCCATGGCAGAAGAAACTGGGTGGTTCGGTAATGGAAGTCGGATTATCTTTACAACCCAAGATCGACA CCTTTTGAAGGCACATGGGATCAACGACCTTTATGAGGTGGGTTCTCCGTCAACAGATGAGGCTCTTCAAATATTTTGTA CGTATGCTTTTCGTCAAAAGTCTCCTAAAGCTGGTTTTGAGGACCTTTCTCGGGAAGTGACCAAACTTGCTGGTGACCTC CCTTTAGGACTTAAGGTAATGGGTTCTTGCTTGCGAGGACTGTCCAAAGAAGAATGGAAAAATAAACTACCGAGTTTAAG GAACAACCTGCACGGGGATATTGAGAGTGCTTTAAAGTTCAGCTATGATGCCTTGCGTAGAGAAGATAAAAATTTATTTC TTCATATAGCTTGTTTTTTCAACCATGAAAAAATTGAGATTGTGGAACATATTCTTGCCAGGGCGTTCTTGAACGTTAGG CAAGGGATTCATGTCTTAACTGAGAAATCTCTCATATCCACCAACTCAGAATATGTTGTAATGCATGATTTACTAGCACA ACTAGGTAGAGAAATTGTGCGAAACGTGTCTACTAGTGAACACTTGACCCGTGAGCCTGGACAACGTCAGTTTCTGGTTG ATGCAAGAGATATCTGCGAAGTACTCAGTGATGATACAGCCGGTACTAGCAGTGTTATAGGAATAAATCTCAAGTTATCT AAGGCAGAGGAAAGATTACATACAAGTGACAGCGCTTTTGAGAGAATGACTAATCTCCAATTCTTAAGAATCGATAGTGG TTACAATGGACTGTACTTTCCGCAAAGTCTAAACTCCATATCTCGAAAAATTAGACTACTAGAATGGAATGATTTTCCAA TGACATGTTTGCCTTCTAATTTTAGTCCGCAGTTCCTCGTCAAACTATGCATGCAGGGGAGCAAGCTTAAGAAGTTGTGG GATGGAATTCAACCGCTTAGAAATTTGAAGTGGATGGATTTGAGATCTTCCAAAAACCTGAAGAAGATTGCTGATCTCTC AACTGCCACTAATCTCACGTACTTATGCCTCCGTGGATGCTCAAGTCTGGAGAACCTCCCATCTTCTATTGGCAATGCAA CTAATCTCCTAAATCTTGATCTCAGTGATTGTACAAGGCTGGTGAACCTCCCTTCTTCTATTTGGAATGCAATTAATCTC CAAACTTTCGATCTCAAAGATTGCTCAAGTTTGGTTGAACTTCCCCTTTCTATTGGGAATGCGATTAATCTCAAGTCATT AAATCTCGGTGGATGCTCAAGTCTGAAGGACCTCCCATCTTCTATTGGCAATGCACCTTATCTCCAAAATCTCTATCTCG ATTATTGTTCAAGTCTGGTGAATCTTCCTTCTTCTATTGAGAATGCAATTAATCTCCAAGTTTTGGATCTCAAATATTGC TCAAGTTTGGTTGAGCTTCCTATTTTTATTGGGAATGCAACTAATCTCAGATACTTAGATCTTAGTGGTTGTTCAAGTCT TGTGGAGCTCCCTTCCTCTGTGGGAAAGCTTCATAAATTGCCCAAGTTGACCATGGTAGGGTGCTCAAAGCTTAAGGTTC TTCCCATCAACATCAACATGGTGTCACTGAGAGAGCTTGATCTCACTGGCTGCTCATCTTTAAAAAAATTTCCTGAGATT TCCACAAACATTAAACATCTCCATCTCATTGGAACGTCAATAGAAGAAGTTCCTTCGTCGATCAAGTCGTGGCCTCATCT TGAACACCTGAGAATGTCATACAGCCAAAACCTCAAGAAATCCCCTCATGCATTGGACACCATCACAGAGCTGCATATAA CAGATACAGAAATACTAGATATTGGTTCATGGGTCAAGGAACTCTCTCATCTAGGCCGACTTGTACTCTACGGATGCAAG AACCTGGTATCTCTCCCACAGCTTCCAGGTTCCCTACTAGACCTAGATGCATCAAACTGTGAGTCCCTGGAGAGACTAGA TAGCTCCCTTCACAACCTGAACTCTACTACTTTCAGATTCATTAACTGCTTCAAACTTAATCAAGAAGCCATACATCTCA TCAGCCAGACTCCATGTCGCCTAGTTGCAGTTTTACCCGGTGGAGAAGTGCCTGCCTGCTTTACTTACCGAGCTTTTGGG AATTTCGTAACAGTAGAGTTGGATGGGAGGTCTCTTCCTAGATCGAAAAAATTTAGGGCTTGCATCTTGTTGGATTATCA GGGCGACATGAAAAAACCGTGGGCGGCATGTAGCGTTACATCGGAACAGACTTACACTTCATGTAGCGCAATACTACGTC CAGTTTTATCGGAGCATCTGTATGTTTTCAATGTTGAAGCACCAGACAGGGTGACTTCCACCGAGCTTGTGTTTGAGTTC AGGGTCTTCCGCACTAACATTTTCCCCACTAACACCTTGAAGATAAAAGAATGTGGGATACTACAACTCCTGGAAGAGGC TGATGATGAACATCGTCAGAGCTTCTCTAGTGACGATGACGATTATTAA |
| AA seq | Len:1083 aa MFSLSIFSLDDAGFCVSLDESVACLSPSSLSFGPASPSLHLLSRSVPVSSLSIGDRKRFHFLPKLLFRQLSETESSPFTY LLADVSHPNDDAKMVEDITTEILNTLINSTPSRDFDGLVGMGAHMEKIEPLLRPDLEEEVRMIGIWGPPGIGKTTIARFL FHQLSSNNDNFQHTVFVENVKAMYTTIPVSSDDYNAKLHLQQSFLSKIIKKDIEIPHLGVAQDTLKDKKVLVVLDDVNRS VQLDAMAEETGWFGNGSRIIFTTQDRHLLKAHGINDLYEVGSPSTDEALQIFCTYAFRQKSPKAGFEDLSREVTKLAGDL PLGLKVMGSCLRGLSKEEWKNKLPSLRNNLHGDIESALKFSYDALRREDKNLFLHIACFFNHEKIEIVEHILARAFLNVR QGIHVLTEKSLISTNSEYVVMHDLLAQLGREIVRNVSTSEHLTREPGQRQFLVDARDICEVLSDDTAGTSSVIGINLKLS KAEERLHTSDSAFERMTNLQFLRIDSGYNGLYFPQSLNSISRKIRLLEWNDFPMTCLPSNFSPQFLVKLCMQGSKLKKLW DGIQPLRNLKWMDLRSSKNLKKIADLSTATNLTYLCLRGCSSLENLPSSIGNATNLLNLDLSDCTRLVNLPSSIWNAINL QTFDLKDCSSLVELPLSIGNAINLKSLNLGGCSSLKDLPSSIGNAPYLQNLYLDYCSSLVNLPSSIENAINLQVLDLKYC SSLVELPIFIGNATNLRYLDLSGCSSLVELPSSVGKLHKLPKLTMVGCSKLKVLPININMVSLRELDLTGCSSLKKFPEI STNIKHLHLIGTSIEEVPSSIKSWPHLEHLRMSYSQNLKKSPHALDTITELHITDTEILDIGSWVKELSHLGRLVLYGCK NLVSLPQLPGSLLDLDASNCESLERLDSSLHNLNSTTFRFINCFKLNQEAIHLISQTPCRLVAVLPGGEVPACFTYRAFG NFVTVELDGRSLPRSKKFRACILLDYQGDMKKPWAACSVTSEQTYTSCSAILRPVLSEHLYVFNVEAPDRVTSTELVFEF RVFRTNIFPTNTLKIKECGILQLLEEADDEHRQSFSSDDDDY* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |