Names & Information
Knowledge of BnaA09G0592100ZY:
| Gene Name | BnaA09G0592100ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: LOW QUALITY PROTEIN: probable disease resistance protein At1g12290 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g10780 OS=Arabidopsis thaliana GN=At4g10780 PE=3 SV=1 |
| NT seq | Len:2616 nt ATGGGTGGTTGCATCTCTTTCCAAGTATCATGCGATCAAGTGCTGAACCGTGTTGGTAGCTGCTTCTGCGGAAAAGGCAA TCATATTGGTAACCTTGAGAAGAATTTGGTGGATCTGGAGAAATCCATGGGAGTACTTAAGGCAAGGCGAGATGATGTGT TAACAAGGGTGCAAGGGGAAGAAGCAAAAGGTCACCGAAGGCTAAAGGAAGTCCAGGTATGGCTTACTAGTGTTCAGACC ATCGAAAACCATTTTGATGATCTAAATATTACTAGAACCAGGGAACTCCAAAGGTTGTGTCTTTTTGGTGTTTGTTCGAA AAACTTTATATCCAGCTTCCATTACGGGAGAATGGTTTCTCTTATGTTGAAAGAGGTTGAGAATCTAAAATCTAGTGGAG TTTTTGGAGCTGTTGCGCTTAAAAAGCCAGCTGTGAGATGTGTGGTGGAGGAAAGGCCTCTACAACCAGTAATTTTTGGT CAAGGAAAAATGCTAGAAACGGCGTGGAACCGCCTCATGGATGATGAGACTGGAACTATGATGGGCCTCTACGGAATGGG CGGAGTAGGAAAAACAACTCTTCTCACACAGATCAGCAAAAGGTTTCGTGAGACAGCTGATGGTGTTCAGATTATCATTT GGATTGTGGTGTCCAGTGATCTACGGGTAGAGAAGATTCGAGATGATATCGCTGAGAAGTTAGGCCTCCGCGGAGAGGCG TGGAACCAGAAAGAGGAAAGACATAAGGTCAATGATATACACACTCATATGGAGGATAAGAAATTTGTCTTGTTGTTGGA TGACATCTGGAAGAAAGTTGATTTAACAGAAATTGGAGTCCCTTTTCCTACAAGCGAAAACGGATGCAAAGTAGTATTCA CTACTCGTTCTAGAGAAGTATGTGGTCACATGGGGGTTGATGATCCAATGGAAGTCCAATGTCTAACAGACAATGAAGCG TGGGACTTGTTCGAGAAAAAAGTCGGACCACTCACGTTAAAAAGCCACCCAAGTATTCCTGCACAAGCAAGAAAAGTTGC TGAAAAATGTTGTGGGCTACCGTTAGCTCTCAACGTCATTGGCGAGACCATGTCATGCAAGAGAACTATACAAGAATGGG ATCTTGCTGTTCAGGTTTTGAATTCGTATGCTGCAGACTTTTCTGGCATGGAAGACCGAATCCTTCCTATTCTAAAGTAT AGCTATGACAACTTGAAGAGTGAACACATCAAGTCATGCTTCCAGTATTGCTCTCTTTTTCCTGAAGATTATTTGATAGA AAAAGAGAAGTTGATAGACTACTGGATTTGCGAGGGATTCATAAGTGAAAAAGAAGATAGAGAAAGAAGAGTAAACCAAG GTTATGATATAATTGGTACCCTTGTCCGTTCATGTTTGCTGCTGGAGGAAGAAGACAACAAATCAAAGGTGAAATTGCAT GATGTGGTGCGTGAGATGTCTCTATGGATATCATCTGATTTTGGAGAAAACAGAGAAAAGTGTATCGTGCGAGCCGGTGT TGGGTTATGTGAGGTACCGAAAGTCGAAAAGTGGAGTGCTGTCGAAAAGATGTCACTGATGATTAATTTGATTGAAGAGG TATCTGGTAGTCCCAATTTCTCCAAACTAACAACTCTATTCCTCCAAGAAAACATGCCATTGGCAAGTATCTCAGGTGAA TTCTTTAAGTGTATGCCAAAACTAGTTGTTTTGGATCTATCTGAGAACTTGGGTCTTAATAGATTGCCGGAGGAAATATC AGAGTTAAACTCCTTAAAATATCTTGATTTGTCAAGAACAATGATCTTGCGACTACCTGCTGGTCTCTGGAAGTTGAAAA AGCTAGTACATTTGTACCTAGAGGGTATGAGGGATCTTCTGAGTATGGATGGAATATCTAAGTTGTCAAGTTTAAGAACA TTAAAGTTACTAGGTTGCAAACAACTTAGGTTTGACAAAAGCTGCAAGGAGTTGGTTCTCTTGAAACATTTAGAAGTTCT AACCATTGAAATCAAGTCAAAATTGGTTTTGGAGAAACTGTTTTTCTCACACATGGGGAGGAGATGCGTTGAAAAGGTTG TTATCAAAGGAACATGGCAAGAATCTTTCGGATTCTTGAACTTTCCGACTATTCTTCGTAGCCTCAAAGGTTCTTGCTTC TTAAGTCTCTCTTCTGTGGCTATAAAAGATTGTGGTGTAAAGGATTTGAAGTGGTTGTTGTTCGCTCCAAACCTTATACA TCTAACTCTGGTGAATTTATTGCAACTAGAAGAAGTAGTGAGCATAGAGGAAGCTGATGAGATGCAGGTACAAGGTGTTG TTCTTTTCGGAAAACTAGAAACTCTACTGATGAGTGACTTGCCTGAGGTGAAGAGCATCTACGGGACTCCCCTGCCATTT CCATGTCTGAGGGAAATGGACATAGAACAATGTCCGAAACTTGGGAAGCTTCCGCTCAGTTCCAAAAGCGTCGCTGAAGT TGAAAGGTTTGTTATAATATACAGATCGGCAGATTGGATAGAAAGGGTTAATTGGGAGGACGAAGCCACGAAACTCCGTT TCCTGCCTTCACGCAGAATGGAAGACAACCCAGAGAGGCATGTTGATTTGCTATAA |
| AA seq | Len:872 aa MGGCISFQVSCDQVLNRVGSCFCGKGNHIGNLEKNLVDLEKSMGVLKARRDDVLTRVQGEEAKGHRRLKEVQVWLTSVQT IENHFDDLNITRTRELQRLCLFGVCSKNFISSFHYGRMVSLMLKEVENLKSSGVFGAVALKKPAVRCVVEERPLQPVIFG QGKMLETAWNRLMDDETGTMMGLYGMGGVGKTTLLTQISKRFRETADGVQIIIWIVVSSDLRVEKIRDDIAEKLGLRGEA WNQKEERHKVNDIHTHMEDKKFVLLLDDIWKKVDLTEIGVPFPTSENGCKVVFTTRSREVCGHMGVDDPMEVQCLTDNEA WDLFEKKVGPLTLKSHPSIPAQARKVAEKCCGLPLALNVIGETMSCKRTIQEWDLAVQVLNSYAADFSGMEDRILPILKY SYDNLKSEHIKSCFQYCSLFPEDYLIEKEKLIDYWICEGFISEKEDRERRVNQGYDIIGTLVRSCLLLEEEDNKSKVKLH DVVREMSLWISSDFGENREKCIVRAGVGLCEVPKVEKWSAVEKMSLMINLIEEVSGSPNFSKLTTLFLQENMPLASISGE FFKCMPKLVVLDLSENLGLNRLPEEISELNSLKYLDLSRTMILRLPAGLWKLKKLVHLYLEGMRDLLSMDGISKLSSLRT LKLLGCKQLRFDKSCKELVLLKHLEVLTIEIKSKLVLEKLFFSHMGRRCVEKVVIKGTWQESFGFLNFPTILRSLKGSCF LSLSSVAIKDCGVKDLKWLLFAPNLIHLTLVNLLQLEEVVSIEEADEMQVQGVVLFGKLETLLMSDLPEVKSIYGTPLPF PCLREMDIEQCPKLGKLPLSSKSVAEVERFVIIYRSADWIERVNWEDEATKLRFLPSRRMEDNPERHVDLL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | RGA9; probable disease resistance protein At1g12290; K13459 disease resistance protein RPS2 (A) |