Names & Information
Knowledge of BnaA09G0606600GG:
| Gene Name | BnaA09G0606600GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: LOW QUALITY PROTEIN: probable disease resistance protein At1g12290 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2 |
| NT seq | Len:2325 nt ATGCTGAGAGAGGTTGAGGATCTTCTCAAACCTAATGGAGATTTTAAAGCTGTTGCGGCTGAAGTTGTTGTGACTGGATG TGTGGTGGAGGAAAGGCCTCTACAGCCAGTAATTTTTGGTCAAGAAACGATGCTGGAAAGGGCGTGGAAGCACCTTATGG ATGATGAGACTGCAATTATGGGCCTCTACGGTATGGGTGGAGTAGGAAAAACAACTCTTCTCACACAGATAAACAATAAG TTTCGTGAGGCAGTTGATGGTTTCCAGATTGTCATTTGGGTTGTGGTGTCTAGTGATCTACGCGTTGAGAAGATTCAAGA TGATATCGCTAAGAAGTTAGGCCTTCGCGGAGAGGAGTGGGACATGAAAGAGGAAATAGATAAGGTCACTGATATACATG CTAAGTTGAAGAATAAAAAATTTGTCTTGTTATTGGATGACATTTGGACGAAAATAGATTTAACAGAAATTGGAGTCCCA TTTCCGACAAAGGAAAATGGATGCAAAGTAGTATTCACCACTCGTTCCAAGGAAGTATGTGGCCGCATGGGGGTTGATGA TCCAATGGAAGTCCAATGTCTAACAGACAATGAAGCGTGGGATTTGTTCAAGAGAAAAGTCGGACCACTCACGTTAAAAA GCTACCCAAGCATTCCTGAACAAGCAAGGAAAGTTACCAGAAAATGTTGTGGGCTACCGTTAGCTCTCAACGTCATTGGC GAGACCATGTCATGCAAGAGAACTATACAAGAATGGGATCTTGCTGTTCAGGTTTTGAATTCGTATGCTGCAGACTTTTC TGGCATGGAAGACCGAATCCTTCCTATTCTAAAGTATAGCTATGACAACTTGAAGAGTGAACACATCAAGTCATGCTTCC AGTATTGCTCTCTTTTTCCTGAAGATTATTTGATAGAAAAAGAGAAGTTGATAGACTACTGGATTTGCGAGGGATTCATA AGTGAAAAAGAAGATAGAGAAAGAAGAGTAAACCAAGGTTATGATATAATTGGTACCCTTGTCCGTTCATGTTTGCTGCT GGAGGAAGAAGACAACAAATCAAAGGTGAAATTGCATGATGTGGTGCGTGAGATGTCTCTATGGATATCATCTGATTTTG GAGAAAACAGAGAAAAGTGTATCGTGCGAGCCGGTGTTGGGTTATGTGAGGTACCGAAAGTCGAAAAGTGGAGTGCTGTC GAAAAGATGTCACTGATGATTAATAAGATTGAAGAGGTATCTGGTAGTCCCAATTTCTCCAAACTAACAACTCTATTCCT CCAAGAAAACATGCCATTGGCAAGTATCTCAGGTGAATTCTTTAAGTGTATGCCAAAACTAGTTGTTTTGGATCTATCTG AGAACTTGGGTCTTAATAGATTGCCGGAGGAAATATCAGAGTTAAACTCCTTAAAATATCTTGATTTGTCAAGAACAATG ATCTTGCGACTACCTGTTGGTCTCTGGAAGTTGAAAAAGCTAGTACATTTGTACCTAGAGGGTATGAGGGATCTTCTGAG TATGGATGGAATATCTAAGTTGTCAAGTTTAAGAACATTAAAGTTACTAGGTTGCAAACAACTTAGGTTTGACAAAAGCT GCAAGGAGTTGGTTCTCTTGAAACATTTAGAAGTTCTAACCATTGAAATCAAGTCAAAATTGGTTTTGGAGAAACTGTTT TTCTCACACATGGGGAGGAGATGCGTTGAAAAGGTTGTTATCAAAGGAACATGGCAAGAATCTTTCGGATTCTTGAACTT TCCGACTATTCTTCGTAGCCTCAAAGGTTCTTGCTTCTTAAGTCTCTCTTCTGTGGCTATAAAAGATTGTGGTGTAAAGG ATTTGAAGTGGTTGTTGTTCGCTCCAAACCTTATACATCTAACTCTGGTGAATTTATTGCAACTAGAAGAAGTAGTGAGC ATAGAGGAAGCTGATGAGATGCAGGTACAAGGTGTTGTTCTTTTCGGAAAACTAGAAACTCTACTGATGAGTGACTTGCC TGAGGTGAAGAGCATCTACGGGACTCCCCTGCCATTTCCATGTCTGAGGGAAATGGACATAGAACAATGTCCGAAACTTG GGAAGCTTCCGCTCAGTTCCAAAAGCGTCGCTGAAGTTGAAAGGTTTGTTATAATATACAGATCGGCAGATTGGATAGAA AGGGTTAATTGGGAGGACGAAGCCACGAGACTCCGTTTCCTGCCTTCACGCAGAATGGTACTTCAATCTCTCAAAGACTC ACCTGCCATTCCAGATGATGAAAAATACTCCGTTCGGAAACTTTCTCCTGATACTGCAGCACACTACAACTTCACCAACA AATAG |
| AA seq | Len:775 aa MLREVEDLLKPNGDFKAVAAEVVVTGCVVEERPLQPVIFGQETMLERAWKHLMDDETAIMGLYGMGGVGKTTLLTQINNK FREAVDGFQIVIWVVVSSDLRVEKIQDDIAKKLGLRGEEWDMKEEIDKVTDIHAKLKNKKFVLLLDDIWTKIDLTEIGVP FPTKENGCKVVFTTRSKEVCGRMGVDDPMEVQCLTDNEAWDLFKRKVGPLTLKSYPSIPEQARKVTRKCCGLPLALNVIG ETMSCKRTIQEWDLAVQVLNSYAADFSGMEDRILPILKYSYDNLKSEHIKSCFQYCSLFPEDYLIEKEKLIDYWICEGFI SEKEDRERRVNQGYDIIGTLVRSCLLLEEEDNKSKVKLHDVVREMSLWISSDFGENREKCIVRAGVGLCEVPKVEKWSAV EKMSLMINKIEEVSGSPNFSKLTTLFLQENMPLASISGEFFKCMPKLVVLDLSENLGLNRLPEEISELNSLKYLDLSRTM ILRLPVGLWKLKKLVHLYLEGMRDLLSMDGISKLSSLRTLKLLGCKQLRFDKSCKELVLLKHLEVLTIEIKSKLVLEKLF FSHMGRRCVEKVVIKGTWQESFGFLNFPTILRSLKGSCFLSLSSVAIKDCGVKDLKWLLFAPNLIHLTLVNLLQLEEVVS IEEADEMQVQGVVLFGKLETLLMSDLPEVKSIYGTPLPFPCLREMDIEQCPKLGKLPLSSKSVAEVERFVIIYRSADWIE RVNWEDEATRLRFLPSRRMVLQSLKDSPAIPDDEKYSVRKLSPDTAAHYNFTNK* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | probable disease resistance protein At1g12290; K13459 disease resistance protein RPS2 (A) |