Gene Name | BnaA10G0150600GG |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | BnaA10g13140D [Brassica napus] |
Best Hit (SwissProt) | Probable disease resistance protein At4g14610 OS=Arabidopsis thaliana GN=At4g14610 PE=3 SV=1 |
NT seq | Len:2310 nt
ATGGGAGGTTTTTTCTCTGTTCCCTTGTCTGGTGATCAAGTACCGAAAGATGTTTCTCACCTTTCATGCTTCAAAGCGAG
TTACATTAATAGTCTTGAGGAGAATCTCGCAGCTATGCAGAGAGACATGGAAGAGCTCAAGGCAAGACAAACTGATGTGT
TAAGAAGGGTCGAGAGGGAAGAGGAAACCAAAAGTATGCAGCGGCTTGCGGAAGTCAACGTATGGCTTAAAAATGTTAAT
AACGTCAGTAGACAAGTCAGTTATCTGCTTAGCAATAGAACTACTGAACTTCAAAGGTTATATTCAAAGAAGTCAAGATC
AAACTACGGTTATGGGAAAAGGGTGTCTTTGATGTTGAAAAAGGTCAATGATCTCAACTCTAATGGAGTTTTTGAAGTTG
TGGCTGAGCCGGCTACTGAAACGTCTACAAAGGAGAAAAGGCTCTCCAGATCCAGACCGGATATTGTTGGCCGGGAAACA
ATTCTCAAGAGTGCTCTGAGCCTCCTCGTGAGTGGTGAAACCGGGAGTATAGGTCTGTACGGAGTCGGTGGCGTAGGCAA
ATCAACTATTCTCCGAGAGATCAGCAACAAGATCACTGCCAGATTTGAGTTTGTGATTTGGGTTGTTGTGTCTCAACATC
TGCCTATCAAGAAGATTCAAGAAGAGATTGGTAGGAAGCTAGGCTTTCATGGGGAGGAGTGGAACCAAAAAGAGGAAAGC
CAAAAGGCCAATGATATACACAACTTCATGAAGGACAGGAGATTTGCGTTGTTACTGGATGATGTGTGGATGAAAGTGGA
CTTAACGAAGGTAGGAGTCCCATCACCAACAAGGGAAAACAAAAGCAAAATAGCATTCACCACCCGCTCTCGAGAGGTGT
GTGTGCAGATGGGGGTTGCTGACCCGATTGAAGTCCAGTGCCTTTCTGAGAATGATGCTTGGGACTTGTTTCAGATGAAA
GTTGGAGGACACGCAAGCTGCTCGAAAATTCAGGAGACGGCAAGAGAAGTTGCTGGAAGATGTCATGGTATACCACTGGC
GCTGAATGTTCTTGGCGAGACCATGTCTTGCAAGAAGAAGAGTTTGCAGAAAAGGAAGATGAAATTCTCTCGATTCTCAA
GTATAGCTATGACAAACAGAGAAAGATGGGTTGTGGAAGCCGGTGTTGGGTTACGTGATATGGTACCTGTTCAAGACTGG
ACCGGAGTGAGAAAGATGTCGCTGATGAATAATGAGATTGAAGAGATATCTGGCGGTCACGAGTGTCATCAACTTACGAC
TCTCTTTCTTCAACAAAACAGCAACTTGGTGCGTATCTCTGGTGAGTTCTTTCAGTATATGCCAATGCTAGTTGTTTTGA
ATATGTCCTTCACTGAGCTCGAGGAATTGCCGGAGCAGATATCACGTTTGTTCGCTTTGCGTTATCTCAACTTGTCACGG
ACAAAGATAGAGCGACTGCCAGATGGTTTAGGAAAGTTAAAACGTCTAGAACATCTCAACTTGGAAACGACCAAGAGACT
CAAGAGCATTTATGGGTTATCAAATGCATCAAGTCTGGGGGTATTGGCACTCCTAGATTCAAACGTTTCGCTCGATGCTA
GCACGATAGAGGAGCTGCAACGCTTCGAACGACTAGAAAGGTTAAACATAGACATATCCTCCAGTTCAGCTTTGAAGCAA
TTGCTTAGCGCTCCTGAGTTGGCATATTGGATTGAAGAGGTGTGTATTAGAGATCTTCAGAGTGACGAAGCATGTCTGGT
TTTTCCAACAACAATGATGCAACTCCGTAAGCTCATCATAAAGAGGTGTGGTGTGTTGGAGATAGATATTGGGAGAGCAT
CAGACGACACGTTTCTGATACATCCAAAACTAGGGAGCCTCTCAAGTGTGACTATAACTGGCTGCAATGGACTTAAGGAT
CTGACGTGGTTGCTGTTTGTTTCAAAGCTTACCTACCTTAAGCTTCAGTGTTTAGATAAGGTGGAAGAAATCATAAGCGA
GACGGGTGAGCAAAACGCAGGAGGCACAAAGACTCCGTTTGAAAAGCTTAAAAGGCTTGAATTGAGTAACTTACCGATGT
TGAAGAGCATCTACAGGAATCCCCTGCTCTTTCCTTGTCTAAAGAAGATTGATGTAGAAAGGTGTCCAAAACTGAGAAAG
CTTCCACTCAGTTCTGGAAGTTGCCTTGGTGGTGATGAACTTGTCATCAGTTACAGTGACGACCAATGGATAGAAAGAGT
TCAATGGGAAGATAAAGCTACTGAAGAACGTTTCTTGCTTTGCTGTGAAAAGGTATTGAATTTCCCATAA |
AA seq | Len:770 aa
MGGFFSVPLSGDQVPKDVSHLSCFKASYINSLEENLAAMQRDMEELKARQTDVLRRVEREEETKSMQRLAEVNVWLKNVN
NVSRQVSYLLSNRTTELQRLYSKKSRSNYGYGKRVSLMLKKVNDLNSNGVFEVVAEPATETSTKEKRLSRSRPDIVGRET
ILKSALSLLVSGETGSIGLYGVGGVGKSTILREISNKITARFEFVIWVVVSQHLPIKKIQEEIGRKLGFHGEEWNQKEES
QKANDIHNFMKDRRFALLLDDVWMKVDLTKVGVPSPTRENKSKIAFTTRSREVCVQMGVADPIEVQCLSENDAWDLFQMK
VGGHASCSKIQETAREVAGRCHGIPLALNVLGETMSCKKKSLQKRKMKFSRFSSIAMTNRERWVVEAGVGLRDMVPVQDW
TGVRKMSLMNNEIEEISGGHECHQLTTLFLQQNSNLVRISGEFFQYMPMLVVLNMSFTELEELPEQISRLFALRYLNLSR
TKIERLPDGLGKLKRLEHLNLETTKRLKSIYGLSNASSLGVLALLDSNVSLDASTIEELQRFERLERLNIDISSSSALKQ
LLSAPELAYWIEEVCIRDLQSDEACLVFPTTMMQLRKLIIKRCGVLEIDIGRASDDTFLIHPKLGSLSSVTITGCNGLKD
LTWLLFVSKLTYLKLQCLDKVEEIISETGEQNAGGTKTPFEKLKRLELSNLPMLKSIYRNPLLFPCLKKIDVERCPKLRK
LPLSSGSCLGGDELVISYSDDQWIERVQWEDKATEERFLLCCEKVLNFP* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0006952 |
Pfam | Leucine rich repeat |
KEGG | disease resistance protein RPS5-like; K13459 disease resistance protein RPS2 (A) |
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