Names & Information
Knowledge of BnaC01G0023600NO:
| Gene Name | BnaC01G0023600NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC01g11870D [Brassica napus] |
| Best Hit (SwissProt) | Inactive disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=3 SV=1 |
| NT seq | Len:7155 nt ATGTCAGCACCTGGGAAGTCTGATTATTCTTCTGGTGGACCAGATAGGCCTTTATACAGGTCTAACTTAGCTTCACAGAT GGCAAGATCTAGTAGCTTTCGCGAGACTATGGAGCAACCTGTCTCATCTTCTCACGCGAGCATGTTGAGGACCACTTCAC CATTAGCACAAACCGATGTTACAAATTTCTTCCAGTGTTTGCGTTTTGATCCTAAGGTGGTTGCCGCAGATCACAAGTCT GTTCGTCAAGGTGACTTTAAGCGTCATGTGAATATTGGCCTTGGAATTCAAGGGGATGAATCTCCAAGCACAACTCCGAG AGGGAAGTTAACTCCATCCCCTATACCAGAAGAGATCAAAAGACTAAAGGCTGGTCTACGGGAAAACATCGTGAAGGCCA GGGAGCGTGTGATAATTTTCAACGAAGCTTCGTCTGTATTTAACAAGGTTTTTCCTACTGTACCCACAAAGAAAAGGTCT CGGCCAGAAGGGTTTTCCGTCGCCAGAGAAGGTTCCCCGCACCTGGTTTATCCTTTTCTTAAGATCGTCCCCAAATCTGC TCCTCCAGAATACGCCACTCTCGCAACGACCTCCTCCTCCCCGGCGGCGGCTACTTCCGGAGTTATAACGAAGCGGTCGA GGAAAGACGACGGAAAAGGACGGCGACTCAGGATACCTGCTCTTTGCGCCGCTAGGCTTTTTCAGTTAACCGGAGAGCTC GGTCATAAATCCGACGGCGAAACCATCGAGTGGCTTCTCCAGCAAGCTGCGCCGTCGCTTGTCGCCGCTACTGGCACCGG CACCATCCCGGCGAACTACTCCTCTCTAAATGTCTCCCTCCGGAGCAGCGGATCGACCCTCTCCGCGCCGCCGTCGTCGA AATCGGTGCCTCTCTACGGCGCTCCCGCAGCGTCCGGTGATCACACACCGCCTCTTTCAGGGTTTCAGAGACCGAGTAGT CTCATCAGCGAAGTGACTAAGGAGCCTGGTCCCGAGAAGAGTAGCAAGAACAAGCTAGTTTTGGAACTGGACATAAGCGG TGATAAGTCCATGCAGAAGAAGGTCATGAAGAAACTTGCTGCACTCAGTGGAATCAATTATATATCCCTAGATCCGGAGA CAGGCACCTTAACCATTAAAGGAGACATTGAATTAAATACGGTACTAGAAAAGGTGGAAAGGTATTGCAGTTGCAAAAGA GTAAAAGTTTCAGGTGAGCCCGCCATGATGGCCGAGCCAAAGAAAATGTATAAAAGGGGAGTTTCGCAAGGGAGGGTTTC TATGGGAAAGGCACTCACTAGTGAGCAAAGTCTGCGATCAACCGCAGGTTCAGGCGACTCATGCTCAGGGATCAACATTC CAGGAAAATCAATCATCACACCTCCTAACGTGAGGAACCTAGATGCTGATTGGTACTCCTTCTGTGATTTCCTTGACCAA CGCATGCGTCCATTGACTCTCTCTGGGTGCACAGCCAAAGACGCCATTGATTTTCTCCGCATGCGGCAGACTTCAGGCAA CGCAGAGGCCCTTGTTGGCCGCCTCAGTGCTGCATGTGAGGCATACGGCATAACACCCAAGGAAAATCCTTTCCGCAGCT TAGCTGTAATATCATACGTGAAGGAGACGAGGGAGATTACTCGAGAAGCAGACTACGTATTAGTTTTTTCGTGCAATGAC AACCTTGATGAGGACGAGACACATTTAATTGAAGCCATCTCGAAAGAGTTACACGAGCGAGAGGTTGCTCCTTTGACATA TAATCTATCTCAGAGAGAGAACCTAGATGGGGACATGCTTTACAGATCCAGTGTTGGTCTAATGGTAGTTTCAAGTAGTT TGGCCTATAGTAGTCAGTCTCTAGATCATTTGGCGGCGATCATGGAATTTTGTAAAGCAAAACACCTTGTTATTATTCCT GTATATCTCAAGGTAACACCTTCTGACATTTGTGGTTGGGAAGACCGTTTTGAACAAGTACTTCCGTCGTATTTAAATTC TATCCAGCCAGACAGAATCCAGAAATGGAAGGCGGCTCTGACTGATGTGGCATCCATTGATGGACATCAATGGTCAGAAG GGAGTCAATTTATGCTTGCCAAGAAAGTTGTAAGGAACGCATGCTTCAGGCTACATTTGAAAAGCAGCAAGAACCTGGTC AGAATCTTAGCATTGTTAAATCACCCCCAGCCTTTAGAGGCGGAAATTGAGGGAATCTGGGGCATGGCAGGAATAGGGAA GACATCCATTGCTAGAGAAATTTTTGAATTACTAGCTCCACAATATGATTTGTGCTACTTTCTGCAAGACTTTCATCGTA TGTGTAAGAGCAAAGGGTTGAGGCAAATACGTGATGATTTCCTCTCTAAAGTATTTAGAGAAGAAGAACTATGTCTAGGC GCTTGTGATACAAAACCGAGTTTCATGAGGGACTGGTTCCAGAATAGAGAGATTCTCGTTGTTCTCGATGACGTGAGTAA TGCAAGAGATGCAGAATATGTATTTGGAGGGTTTAGCTGGTTTTCTCGTGGGCACCGAATCATTTTAACCTCTAGGAGTA AACAAGTTCTTGTGCAGTGTAAGGTTAAAGAGCCATACGAGATTCAAAAGTTATCCGATTTTGAATCTTTACGTCTCTGC AAACAGTATTTAAAAGAAGAAAGTGCCATCATGTCCGAGCTAATGAGCTGCAGTAGCGGTATACCACTGGCTCTCAAGAG TTTTGTTTCCTCTGTATCGAAGCAGCATATGAACGATATGAAGAAACATCTTCAAAGCTTGCGGATAAACCCTCCAACCA AGATTCAGGAGGCATTTCGGAGAAGCTTTGATGGACTAGACGAAAACGGAAAGAACATATTTTTGGACCTTGCATGTTTT TTCAGAGGGGAGAACAAAGAGCATGTGGTGCAATTACTTGATGCGTGCGGTTTTTTTACATATCTTGGAATTTGTGATCT CATTGACGAGTCTCTCATTAGCCTTCTGGACAATAAAATAGAGATCCCTATTCCTTTTCAAGATATTGGTCGATTTATTG TTCGTGAAGAAGACATGGATCCATGTGAACGTAGCAGATTGTGGGACTCTAACGACATCATTGATGTATTGACAAACAAT TCACTTCTTAATTTGTCTGGCTGCTCAGAGCTTGAGGATATTCAGGATTTTTCACCAAACCTGGAAGGGCTATATCTGGC TGGGACTGCCATAAGGGAACTTCCATTTTCAGTCGAGAATCTTACTGAACTTAGTACGCTGGATCTGGAGAACTGCGTAA GGCTTCAGAAACTGCCATCCGGAGTAAGGAACTCGAGATCTATTGTCAACCTTAAGCTGTCTGGCTGCACAATTCTTGAG CTTGGGAAGCGGAAAAGGCTATTGGCTCTCCAAGCTTCGTACGCCTCTATCCTTGTGGCAAGAGCTCTCTACAAAGAAAC CTTATTTTACGTGGGTTTTCTTCTGGATATGTCCTTTGTTGTGCCACAAGAAAGGATTGGGCTTGGTTTTAATTTAACAG GAACGTTGCTCCCAAACGAGTTCAACGGCTCAGAGTCTCCGTCTTTCCCAAATCGTATAATGGCTTCTGCCTCGTCTTCC TCCAAGCGCCAGTTCGACGTGTTTGTGAGCTTCAGAGGCGCTGACACGCGTACCAACTTCACTTCTTACCTCCGTCAGTC CCTACACCGGAAAGGCATCGATACTTTCTTTGATGAGAAACTCCGGCGAGGCCAGGATCTCTCGGTCCTCTTTGACAGGA TCGAGCAATCGAAGATGTCCATCGTCGTCTTCTCGGAGAACTACGCCAACTCCACCTGGTGCTTGGAGGAACTCTGGAAG ATAATGCAGTGCAGGGAGAAAAGAGGTCACGGTGTGATACCCATTTTTTACAAAGTCAAGAAGTTTGATGTGGAGAATCA GAAAGGGAGTTTTGAAGCTCCTTTCAAGAACCCTAAGGAGTGTCTCAAGGGAGATGGGCAGAAGGTTGGGGCCTGGAAGG AAGCTCTGAGGGCTGCTTCCAATATACTAGGCTTTGTGCTTCCTGAAGAAAGGCCGGAGAGTGAATTTGTTGAGAAAATA GCCAAGGAAACTTTCAGGATGCTGAATGATCTGTCTCCATGTGAGATCAGTGGTTTCCCGGGGATTGAGTCACGTTCAAA GAAACTGGAGGAGTTATTGATGTTTGATAATGCAAACTGTGTCCGTGCCATTGGGGTTCTCGGCATGACTGGAATCGGCA AGACGAAGGTTGCTGATAGCGTATATAAACGAAACCACCGTCAGTTTGATGGCTACTATTTCCTTGAAGACGTTGACAAG GAGCTGGAATGGCATACATTAAGTTATTTGCGGGAGAAACTCCTCTGTAAGTTATTGGATGAAGAAGATTTGGATGTCAG AGCGCTTGGAAGATTGGAAGACTTTCTAAGGAACAAGAAGGTGTTTATTGTGCTGGATAATGTGACCAAAGAAAACCAAA TCAAAGATCTCATTGGGCCGCTGGAGCAGTACCGGAAAGGAAGTAGGATTGTTATAACAACCAGAGACAAGAAACTGCTG CAGAACAACACTGATGCAACATATTTAGTTCCCAGGTTAAACGACTGGGAAGCTATGGAGCTTTTCAGCATTGGTGCATT TCCTGAAAACCTCTACCCACCGGAAGAATTTCTGGATCTATCAAACAAGTTTGTTTATTATGCTAAAGGGCATCCGTCAG CTTTGAAGTTATTAGGCTCAGGTCTATGCAAGAAGGAAAAAACATACTGGATGGAGAAATGGGAGAGATTAAGGGTAATG CCAGACAAGGAGATTCAGAAAGAGCTAAAAAGGAGCTATGAAGAACTGGATGATGAACAGAGGAGCATATTCCTGGACAT AGCATGTTTTTTCAGATCTGAAAAAGCAGACTTCGTTTCCAGCATTCTGGAATCAGACCGTGTCAATGCTGCAGCTGTGA TGAGAGAACTTGAAGATAAGTGCTTGGTGACCATTTCGTATAATCGGCTTGAGATGCATGATCTAATGCATGCAATGGGG AAGGAAATCGGAAGTGAATCGTCCATCAGAAGGGCAGGCAAACGTAGTAGATTGTGGAACCACAAAGATATTCGTCATGT GCTGGAGCAGAGAACGGGAACAGAATGTGTTAGAGGCATCTTCTTCAACATGTCTAATGTCGAAAAGATCAAACTAAGCC CTGACGTTTTCATAAGGATGTCGAATCTCAAATTCCTGAAATTCCACAATTCTCATTGTTCCCAGTGGTGTGACAATGAC CATAAGTTTCAGTTCTGCGAAGGGCTTGATCACTTTCCAGATGAGCTTGTGTACCTCCACTGGCAAGGGTATCCTTACAA TTGCTTGCCATCAGAATTTAATCCAGAAGAACTTGTCGATCTTAATCTGCGTTATAGCCACATCAAACAACCGTGGGAAA CTGAAAAGAACACAGAAAATCTAAGATGGGTCGACCTCAGTCATTCAAAGGGCTTGCTGAACTTATCAGGTTTGTCCAAG GCCAAAAATCTTGAACGACTGGATCTTGAAGGCTGTACGAGTTTGGCTGCGTTGGGCTCATCAATAGAACAGATGAACAA ACTTATTTACTTGAACCTCAGAGAGTGCACAAGCCTAGAGTGTCTTCCAGAGGGAATCAACTTAAAATCTCTGAAGACTC TGATCCTCAGTGGCTGCTCAAACCTTCAAAAGTTTCAAATCATATCAGAAAATATTGAATCTCTTTATTTGGAAGGCTCA GCAATCAAGCAAGTCGTTGAACACATTGAGAGTCTTTGCAATCTTATTTTACTGAATCTCAAGAATTGTCGCAGGTTGAA GTCACTTCCCAACGATCTTTACAAGCTGAAATCTCTTCAAGAACTCATCCTCTCTGGCTGTTCAGCGCTGGAGAGTCTTC CACCCATCAACGAGGAAATGGAATGCTTAGAGATTTTGCTTATGGATGGAACATCCATCAGACAGACACCTGAAATGATT TGCTTGAGTAACCTCAAGCTGTTTTCCTTCTGTGGATCTAGCATAAAAGGTTCCACATGGTTGGTATTGTTGCCTTTCTC AGGCAACTCTTGCTTATGGGACCTCTATCTCACGAATTGCAATATCTACAAACTGCCGGATAACTTTAGCTCCTTACGCT CGTTGCGATGCCTATGCTTAAGCAGAAACGATATAGAGACCTTACCTGAAAGCATCGAGAAACTTTATTCTCTGTTGTTG CTTGACTTGAAACATTGCCGCAACCTCAATTCTCTCCCGGTGCTTCCACCTAATCTACAGTATGTAGATGCTCATGGATG TGTTTCTCTGGAAAAAGTTGCCAAACCAGTGACGCTTCCCTTGGTAACTGAGAGGATGCATACTACTTTCATATTCACGG ATTGCTTCAAGCTCAACCGAGCTGAACAGGAAAGTATTGTAGATCAAGCCCAACTCAAGAGCCAGCTACTAGCAAGGACA TCTCTTCAACATAATCATAAGGGACCAGTTACGGATCCTCTGGTTGCCGTTTGCTTTCCAGGAAGTGACATACCTTCATG GTTATGTAATCAGAGAATGGGATCTTCCATAGAAACCGACCTGGTTTCACACTGGTGTAACAGTAAATTTATAGGAGTTT CCCTATGTGTTGTTGTCAGCTTCGAGGGCCATGAAAGTTGTTATGCCAACGGCTTATCTGTAAGATGCAAGTGCGAATTC AAAAATCAAAACGGTCAGTCTATCAGCTTTAGTTTCTGTCTTGGGGGATGGAACGAGTCATGTGGATCATCTTGTCATGA ACCACGGAAACTTGGATCTGACCATGTTTTCATCAGTTATAACAAGTTCAAAGTGCCAGTCTACCGATGGAGTGAAGAGA GTAACGAGGGCAATAGATGTCGTCCCACTAGTGCCTCGTTTGAATTCTACCTTACTGATGACACTGAAAGGAAACTAGAA AGCTGCAAGGTGACAAGGTGTGGGATGAGTTTGCTATATGATCCAGATGAGAACGACCGTGGATTCCAGGGAACACGGGT TACAGATATTGTTGAGCGTACATCGAGTGAAGCTTTTGTGCCCGTGAAAGGTCTGTCTCTCTCGCAAGTTGGAGCAAGAA GGAATGGTATAATAAGAGATGAAATCCCCATGTGA |
| AA seq | Len:2385 aa MSAPGKSDYSSGGPDRPLYRSNLASQMARSSSFRETMEQPVSSSHASMLRTTSPLAQTDVTNFFQCLRFDPKVVAADHKS VRQGDFKRHVNIGLGIQGDESPSTTPRGKLTPSPIPEEIKRLKAGLRENIVKARERVIIFNEASSVFNKVFPTVPTKKRS RPEGFSVAREGSPHLVYPFLKIVPKSAPPEYATLATTSSSPAAATSGVITKRSRKDDGKGRRLRIPALCAARLFQLTGEL GHKSDGETIEWLLQQAAPSLVAATGTGTIPANYSSLNVSLRSSGSTLSAPPSSKSVPLYGAPAASGDHTPPLSGFQRPSS LISEVTKEPGPEKSSKNKLVLELDISGDKSMQKKVMKKLAALSGINYISLDPETGTLTIKGDIELNTVLEKVERYCSCKR VKVSGEPAMMAEPKKMYKRGVSQGRVSMGKALTSEQSLRSTAGSGDSCSGINIPGKSIITPPNVRNLDADWYSFCDFLDQ RMRPLTLSGCTAKDAIDFLRMRQTSGNAEALVGRLSAACEAYGITPKENPFRSLAVISYVKETREITREADYVLVFSCND NLDEDETHLIEAISKELHEREVAPLTYNLSQRENLDGDMLYRSSVGLMVVSSSLAYSSQSLDHLAAIMEFCKAKHLVIIP VYLKVTPSDICGWEDRFEQVLPSYLNSIQPDRIQKWKAALTDVASIDGHQWSEGSQFMLAKKVVRNACFRLHLKSSKNLV RILALLNHPQPLEAEIEGIWGMAGIGKTSIAREIFELLAPQYDLCYFLQDFHRMCKSKGLRQIRDDFLSKVFREEELCLG ACDTKPSFMRDWFQNREILVVLDDVSNARDAEYVFGGFSWFSRGHRIILTSRSKQVLVQCKVKEPYEIQKLSDFESLRLC KQYLKEESAIMSELMSCSSGIPLALKSFVSSVSKQHMNDMKKHLQSLRINPPTKIQEAFRRSFDGLDENGKNIFLDLACF FRGENKEHVVQLLDACGFFTYLGICDLIDESLISLLDNKIEIPIPFQDIGRFIVREEDMDPCERSRLWDSNDIIDVLTNN SLLNLSGCSELEDIQDFSPNLEGLYLAGTAIRELPFSVENLTELSTLDLENCVRLQKLPSGVRNSRSIVNLKLSGCTILE LGKRKRLLALQASYASILVARALYKETLFYVGFLLDMSFVVPQERIGLGFNLTGTLLPNEFNGSESPSFPNRIMASASSS SKRQFDVFVSFRGADTRTNFTSYLRQSLHRKGIDTFFDEKLRRGQDLSVLFDRIEQSKMSIVVFSENYANSTWCLEELWK IMQCREKRGHGVIPIFYKVKKFDVENQKGSFEAPFKNPKECLKGDGQKVGAWKEALRAASNILGFVLPEERPESEFVEKI AKETFRMLNDLSPCEISGFPGIESRSKKLEELLMFDNANCVRAIGVLGMTGIGKTKVADSVYKRNHRQFDGYYFLEDVDK ELEWHTLSYLREKLLCKLLDEEDLDVRALGRLEDFLRNKKVFIVLDNVTKENQIKDLIGPLEQYRKGSRIVITTRDKKLL QNNTDATYLVPRLNDWEAMELFSIGAFPENLYPPEEFLDLSNKFVYYAKGHPSALKLLGSGLCKKEKTYWMEKWERLRVM PDKEIQKELKRSYEELDDEQRSIFLDIACFFRSEKADFVSSILESDRVNAAAVMRELEDKCLVTISYNRLEMHDLMHAMG KEIGSESSIRRAGKRSRLWNHKDIRHVLEQRTGTECVRGIFFNMSNVEKIKLSPDVFIRMSNLKFLKFHNSHCSQWCDND HKFQFCEGLDHFPDELVYLHWQGYPYNCLPSEFNPEELVDLNLRYSHIKQPWETEKNTENLRWVDLSHSKGLLNLSGLSK AKNLERLDLEGCTSLAALGSSIEQMNKLIYLNLRECTSLECLPEGINLKSLKTLILSGCSNLQKFQIISENIESLYLEGS AIKQVVEHIESLCNLILLNLKNCRRLKSLPNDLYKLKSLQELILSGCSALESLPPINEEMECLEILLMDGTSIRQTPEMI CLSNLKLFSFCGSSIKGSTWLVLLPFSGNSCLWDLYLTNCNIYKLPDNFSSLRSLRCLCLSRNDIETLPESIEKLYSLLL LDLKHCRNLNSLPVLPPNLQYVDAHGCVSLEKVAKPVTLPLVTERMHTTFIFTDCFKLNRAEQESIVDQAQLKSQLLART SLQHNHKGPVTDPLVAVCFPGSDIPSWLCNQRMGSSIETDLVSHWCNSKFIGVSLCVVVSFEGHESCYANGLSVRCKCEF KNQNGQSISFSFCLGGWNESCGSSCHEPRKLGSDHVFISYNKFKVPVYRWSEESNEGNRCRPTSASFEFYLTDDTERKLE SCKVTRCGMSLLYDPDENDRGFQGTRVTDIVERTSSEAFVPVKGLSLSQVGARRNGIIRDEIPM* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Heavy-metal-associated domain |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |