Names & Information
Knowledge of BnaC01G0052400ZS:
| Gene Name | BnaC01G0052400ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein At4g33300 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana GN=At4g33300 PE=2 SV=3 |
| NT seq | Len:2463 nt ATGGCCGTCACCGATTTTTTCGCCGGCGAAATAGCGACGGAGCTTCTGAAACAGCTCTTCTCCATATCCACCAAAGCATG GAAATACAAAAACATCGCCGACAGACTCATCGCCTTGATCGAGACAATCCAGCCCACGATCAAGGAGATTCTATACAGCG GCGTGGAGCTTCCTCCTCACCGCCAAGCTCAGATCGGTATGCTCTTTAGCACCCTCGAGAAAGGCCATAAACTCACTGAG AGAGTCTTGAGCTCCCGTCGATGGAACATGTATCGACAGTTCACACTAGCGAAGAAGATGGAGAAGCTTGAGAAGACGAT CTCTGATTTTATGAAGAATCAGGTATTGACTCATATCTTAGCTGATGTTCATCAGCTCCGGGCCAACGCCGACGTGAGGT TTGATAGAGTTGAGAGGAGCCTCACTGGCCTCGAGGAGCAGTTAGGTTCTATGAAGATCGGAGGAGGAGGGATGATAAGG GATGCGATGAAGATAGCCGAGGCTACGATGGAGATTGAGACGAGCAGTGAGGATGAGAAGTTTGGGGTTGGGTTGGAGAT GGGAAAGAGGAAGGTGAAGAAGATGATGTTCAACGCTGAAGGAGGTCTTTTCGGGATTAGTGGTATGGGTGGTGTCGGTA AAACCACTCTTGCTAGAGACCTTGAACGTGACAATGATGTCCGATGTTACTTTGAGAAGATTTTGTTTCTGACTGTATCA CAATCCCCGCTAGTTGAGGAGCTGAGAGCACATATATGGGGTTTTTTGACCGGTTGTGAAGGTGTAGATCATGTTCAAGA CTGGAATTTACAGTATAACGGTGGGGTTAAAACAAAGAAGCTGGTGATTCTTGATGATGTTTGGACAAGAAAAGCTTTGG ACAGCTTGACTTCTAACCTTCCTAGTTGCACAATTCTTGTGGTTTCGCGGTCCAAACTCGCAGATCCTAATGCTACTTAT GATGTTGAAGTGCTAAGGGAAGATGAAGCTATCTCTCTCTTTTGTCTCTGTGCGTTTGGTCAGAAATCTCTTCCTCCTGG TTTCGACAAAGACCTTGTTAAGAAGGTTGCTGGTGAGTGTAAAGGTCTACCTTTGGCTCTCAAAGTTACGGGCGCTTCAC TAAAAGACCGCCCTGAAATGTATTGGCAGGGCGCATTGCAGAGGTTATCAAAAGGTGAACCTGCTGATGAAACTCACGAG ACTAGATTGCTTCATCACATGGAAGCTAGTCTAGCAGATCTGGACGAGACAGCCAGAGAGTGTTTCTTGGATCTTGGCGC ATTCCCTGAAGACAGGAAGATTCCTGTTGATATTCTCATCAACATGTGGATTGAAGTACATGATCTAGACGAGGCAGTTG CTTTTGCCACTCTTGTTGATTTGTCACACAAGAATCTCCTTACTCTTGGGAAAGATCCACGGCTTGGCTCTACGTATGCA AGCTACTATGATGTATTTGTGACACAGCATGATGTTCTGCGTGACTTGGCACTTCATTTATCCAACAAAGGGAAAGTAAA CAGAAGAAGGCGATTGCTGATGCCAAAAAGAGAGGAAGAGCTTCCGAAAACATGGGGAAAGAACTGTGATGAGGAATACA ATGCAGAGATAGTCTCTATTCATACATGGGAAATGGATGACATGGATTGGTCTGACTTTGACATGGACTTCCCTAAGGCA GAGATTCTAATATTGAATTTTTCCTCGGACAAGTATGTTTTGCCTCCTTTCCTCAGCAAGATGACCCGGCTTAAGGTCCT CGTGATCATCAACAACGGCATGTCCCCTGCGATTCTCCGTGACTTTTCAATGTTTGCCAACTTGTCGAAACTAAGGAGTC TCTGGCTCGAGAGAGTTCACGTCCCTGAGCTCTACAACACAACAATCCCCCTGAAACATCTCCACAAGATGTCTCTGATT CTGTGCAAGATCAATAACAGTTTCGATCAGACCGGAGTCGACGTCTCCTGTATCTTCCCAAAGTTGGGAGACCTGACGAT AGATCACTGTGATGATCTCGTGACACTGCCTTCAAGCATCTGCAAAATGACCTCTCTTAACTCATTAAGCATAACAAACT GTCCACGCCTCGGTGAATTGCCTAAGAACCTAAGCAAGCTACAAGCTCTTGAGCTTCTGAGGCTATATGCTTGCCCCGAG CTAAAGGCATTACCTGATGAAATCTGCGAGCTTCCTCAGCTTAAGTACCTCGACATCTCGCAGTGTGTTAGCCTGAGTTG TCTTCCGGAGGATATAGGAAAGCTAAAGACACTTGAAAAGATTGACATGAGAGAATGCTACATCGCTGGTAGAGTGAGCT CCGCTGTTTCGTTGGAGTCCCTACGCCATGTGATTTGCGATGAGGACGTTGCGTTTATATGGGAAGAAGTTGAGAGGGCC GTTCCAGGGTTAAAGATTGAAGCTGCTGAGAAATGTTTCAGTTTAGATTGGCTCGACGAGTAA |
| AA seq | Len:821 aa MAVTDFFAGEIATELLKQLFSISTKAWKYKNIADRLIALIETIQPTIKEILYSGVELPPHRQAQIGMLFSTLEKGHKLTE RVLSSRRWNMYRQFTLAKKMEKLEKTISDFMKNQVLTHILADVHQLRANADVRFDRVERSLTGLEEQLGSMKIGGGGMIR DAMKIAEATMEIETSSEDEKFGVGLEMGKRKVKKMMFNAEGGLFGISGMGGVGKTTLARDLERDNDVRCYFEKILFLTVS QSPLVEELRAHIWGFLTGCEGVDHVQDWNLQYNGGVKTKKLVILDDVWTRKALDSLTSNLPSCTILVVSRSKLADPNATY DVEVLREDEAISLFCLCAFGQKSLPPGFDKDLVKKVAGECKGLPLALKVTGASLKDRPEMYWQGALQRLSKGEPADETHE TRLLHHMEASLADLDETARECFLDLGAFPEDRKIPVDILINMWIEVHDLDEAVAFATLVDLSHKNLLTLGKDPRLGSTYA SYYDVFVTQHDVLRDLALHLSNKGKVNRRRRLLMPKREEELPKTWGKNCDEEYNAEIVSIHTWEMDDMDWSDFDMDFPKA EILILNFSSDKYVLPPFLSKMTRLKVLVIINNGMSPAILRDFSMFANLSKLRSLWLERVHVPELYNTTIPLKHLHKMSLI LCKINNSFDQTGVDVSCIFPKLGDLTIDHCDDLVTLPSSICKMTSLNSLSITNCPRLGELPKNLSKLQALELLRLYACPE LKALPDEICELPQLKYLDISQCVSLSCLPEDIGKLKTLEKIDMRECYIAGRVSSAVSLESLRHVICDEDVAFIWEEVERA VPGLKIEAAEKCFSLDWLDE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Arabidopsis broad-spectrum mildew resistance protein RPW8 |
| KEGG | SORBIDRAFT_05g008280, Sb05g008280; hypothetical protein; K13457 disease resistance protein RPM1 (A) |