Names & Information
Knowledge of BnaC01G0063500NO:
| Gene Name | BnaC01G0063500NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103861120 [Brassica rapa] |
| Best Hit (SwissProt) | Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14 PE=2 SV=1 |
| NT seq | Len:1410 nt ATGATCAAGTGTTCATCAGTTTCAGAGACCAGAGGCACTGATCATCTGGTTTTTCTTGACCTGATCTCTCTTAAAAATCC TATCCTCGGTCAGCGGCTAATCAAGCGTGTTCAGGATGGAATGATTTTCTTGGTGTTGCTAGGTTCTGTTGACGGCTCCG TTGAGGATGTTGATTTCAAGCCTCGCTTGTTGTCCAGGAAACCTCGACTATTTCCTGGTAACAAGCTTATTGTCTCCCCT CAAGAAATTCAAGAGCAAAGCTACTTTTCACCAGTTCAAGTCAGCACGGAATATGCAGATGTGTTAGCAATGGCAGAGAG TAATGAAAATACTCGGAATCGTCTTGGTGTAGATAAAAACTCCGATTGTTCTTTGACCTGCTTTTCATTGTTATGCAACA TTATGAAACGTTTTGAAATGATGATAAATCCTCCTCCGCCTAGAGTGTTCATCAGTTTCGGCGAGAAGCAGCTCGAAATG AACCTAGTAAGTTCTCTGAAAACAGAATTTGAATCAAACGAAATCTCGGTATATATAGAAGATGAGACAAAGGAGAGGAT CAAAGAGTCAAAGGTTGCAATAGTTGTCTTCTCAGACAAGTACCCTGAGTCACCAGAGTGTCTTGATGAGCTCGTTGAGA TCAAGAAGCTTATGGACGTAGGAGAGATCACTCCCTTCCCTATTTTCTACAAGCTAAAGGATGTTCCTAGGCTAGCTCAA TCAGTTAAACAACTGAAGGGTTGTTTCCGTAATAGGCTTCTCAAGATAGAACAAGAAGTGCGCAAAACCGTCAATAGGGA CAATGTGAACTCTATACTAGATACCGAAGCTAGAATCTGGGAATGGAGACAAGCTATCTCGTCCATTTCCTCAAGACCAG GCTTGAGCAATGAAAATAGCTCTGATCCAGTGTTCTTCACTGATGTCGTCACCAAGGTCAAAGAACTGTTTGAATTTAAG GCTATACCGAAGAAGTCTAGTTCCTATATAATTACTAATCAAGTGATTGAAGAAAAGCCTATAATGCATCAACAGAAGAC AGCACCAGAAATACCAACAGTCAAATCCCTAGATGATGACTTATTCTACTCCCTACCTTCGTTCTTACAAGCTCTAGACT TTGAAATTACTGACCTTGAGGGCTTCACCGAGATGCACAATGGTCTCATATCTCTGAGCCTAAAAAGACACAATAATCTA GTATGTCTGAACTTGGGTTCTCTTGAAAAGCTGGTCCATTTTCGGTGTTCTGACTCATTCGATTTCCTTAGTCAGGGTTT TGGTCTGAATCATCCTGGTATCAGCAGATTTGAAGAACCTTCTCGGGTCCTTGAAATAGAATCATCTCAACCCCAACAAC GGTTTGATAACGTCTTATCGTCTCATCTCAAAATCACCAATATCACATAA |
| AA seq | Len:470 aa MIKCSSVSETRGTDHLVFLDLISLKNPILGQRLIKRVQDGMIFLVLLGSVDGSVEDVDFKPRLLSRKPRLFPGNKLIVSP QEIQEQSYFSPVQVSTEYADVLAMAESNENTRNRLGVDKNSDCSLTCFSLLCNIMKRFEMMINPPPPRVFISFGEKQLEM NLVSSLKTEFESNEISVYIEDETKERIKESKVAIVVFSDKYPESPECLDELVEIKKLMDVGEITPFPIFYKLKDVPRLAQ SVKQLKGCFRNRLLKIEQEVRKTVNRDNVNSILDTEARIWEWRQAISSISSRPGLSNENSSDPVFFTDVVTKVKELFEFK AIPKKSSSYIITNQVIEEKPIMHQQKTAPEIPTVKSLDDDLFYSLPSFLQALDFEITDLEGFTEMHNGLISLSLKRHNNL VCLNLGSLEKLVHFRCSDSFDFLSQGFGLNHPGISRFEEPSRVLEIESSQPQQRFDNVLSSHLKITNIT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | hypothetical protein; K04646 clathrin heavy chain (A) |