Names & Information
Knowledge of BnaC01G0115000GG:
| Gene Name | BnaC01G0115000GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC01g11830D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RRS1 OS=Arabidopsis thaliana GN=RRS1 PE=1 SV=1 |
| NT seq | Len:4710 nt ATGGACAGACTCCGCGCTCTCCGCCGTCAGGGATTGCGCGATTTTGAGCCGTCACTCCCGCCGCGATTTATGGATAGAAT CCTCGACCGTATGAAGAAATCTTTGAATCGGAGTGGGATAAGCCGCCGCCGGCTAGAACGGTGTTCTAGTTCCTTCGCTG AAGATCTCTCAGTCTCGACTTCTTCTTTCGCGACGTTACCTGATAGGACTAGTTTCCGCCTCCTCGCAGCAGGAGGCGAT GGCGAATTGGATCGGATTTACAAGTCCCTTGGGGTTTCTGGTCCCGACGATTTGGCGATTTCTTTTGACGCGTGGGAGGC TAGCAAGATGCGTTCCTCCTCTGGTATTGTTAATAGGTTTCAGCCTCAGGCCGATGTTTTGAGTAGTGGTGTTGATTCAC TGGATCGGGACAATACTGGTGGTGTGGGCAGGTTCTTCAAGGAGCATGCGAGTGAAAAAGCTAGTGAGAAGGAACATGGC GAGATGAATCTCAATCCCAATTACCACGATGACGTAAGGGAGGATCTCTTTGAGATTTGTTTGACAACGATTGATGTGAG TAACGTAGACCGTCTAGCCGTTAAGGCGAACAAGGACGCTGGTGAATACTTTCTCTTAGCCACCGTCGTTGCAGGCACCG ACAGCCTCCTTCGATTTGAGGACGAGGAAGGCAAGACATGGTTGTTTGGGTTCTCATATCTTAACGTCAGTCAATGCTGC GAATTTACCCAAGGCTGGAGCAGCTACGTTGAGGAGAAGCAGCTTAAAGCTGGAGACTTTGTTTCCTTTCAAAGAGATCG TAAGGACAGCAGCAAGCTCTTCATTGGCTGCAGAAAGAGTGACGAGTCTTTTCCAAATCCAACATCACCGGGTGCATCCA TCAAGACGGTAGAAATGAGAGAGAGACTCAAGGGAGTTGAAACTCCTTTCCAGCCAAAATTGTCTGAGCATAGCGTTACG GGGTCTGACCCTGTATTAGTCATTTATTGTGGTGACAACCAGGTCTCCGAGGAGATATACCTCATCAGCTACATCTTCAA CGAGTTGTGTCGCCGTGGCTTTTCCCCTTTGAGATATGATATGAAAAAGGGCACTGTGACTGAAAATCAGAAACTGCTAC ACATATCCCGGGTTGGTATTATCATTTTCTCGATGAACTTTGCTCATTTCAGAGAGTGCCTGGATGGATTCGTGGCAGTC ATGGATCATTTGAAAGCTAACGAGCTTGTCCTTGTTCCTGTGTTTTTTAAAGTACGTGTTTCAGACGTCAGGGGCCAAAG TGGCTCTTTTGGAAGAGCATTCATACGACTTAGGAATTCAGTCAAGGCTTCCGAAGTTCTGAAATGGAGGGCGGCTATGA TCGAATTAACTTCCATCAGTGGATATGCGTATAAGAAGGGGGATGAGGTTATTCTGGCCAAGAATATTGTCAGAGATGTC TGTTTGCCACTCAGTTCCGAAACCAACATGAAGCTAAGAGGAACGAGGCTTTCATTAGAAAGTATATTGTCTCTGCTGAA TCGTTCTCAACCCTCATCCCCACAGATTGTTGGACTTTGGGGTATGGCTGGCATAGGGAAGACTACCATCACGAGAGAAT TTTTCAGAACACAAGCTGAGCGATATGACGTGTGCTACTTTCTGCCTGACTTTCATCTAATGTGTCAAACAAAAGGGTTG AGTTATTTGCGTGATGATTTCTTCTCGAAAATATTTGGGGCAGAAAAAGTTTTCGTAGACGCATGTGATACAAAACTAAG ATTCACAAGGGATAGGTTCCTGGGTAAAAAGGTTTTGATTGTTCTTGATGGTGTGAGTAGTGCCAAAGATGCAGAAATTT TGGTTGGAGGGTTTGGCTGGTTTTCTGGTGGACATACAATCATCTTAACATCTAGGAATAGGCAAGTTCTTGTACAGTGT AACGCCAAAGTGATTTACGAGATCGAGAAGCTATCCAAGCTCGAGTCTCTTCACCTTTGTTGCAAGTTTGCCAGTAAAGA AAATTGTAAAGGAAGAATGTCGTTGACATCGGAGCTTGTGGACTACGCTAGTGGCAATCCTTTGGCTCTGCGAGTCTTAG GTTTGTCTATTCAAAATCAATCTATGAAAGATCAGAAACAACATCTGAGAAGACTGCGTCAACATCCTCCAGTCAAAATT CTGGATGCATTTAAAATAAGTTTTAATGGACGAGATGGTGACGAGAAGAGCATATTTTTGGACCTGGCTTGTTTTTTCAG AGGGGAGGATAGAGATCGTGTGGTGAAAATCCTTGATGATTGCGGTTTTTCTACAGATTTAGGAATCTATGGTCTCATTG ATGAGTCTCTCATCAGCCTTTTAGGTAACAAGATAGAAATGCCCAACATTTTCCAAGACGCGGGTCGATTTGTTGTTTGT CAAGAACACGAAGAGCCAGGCAACCGTAGCAGATTGTGGGATTCTAGTGATATTGCTGGTGTCCTGAAAAATAATACAGG AACAGAAGCAGTTGAGGGAATATTTCTGGATGCATCTGGCTTGACATTTGATTTGAGTTCTACTGCATTTGCGAGGATGT ATAGACTTAGATTGCTCAAGATCCACTGTCCAACTTCTGTAAATCATTGCAAGGTTTGTCTACCTGAAGGCCTCCATTCT TTGCCTGATGAGCTACGCCTACTCCACTGGGAAAAATATCCTCTTGGATCGTTACCTCGGAACTTCAACCCTAAAAATCT TGTAGAACTGAACATGCCATATAGCAACTTGACAAAAGTATGGAAAGGAACAAAGAATCTTGAGAAGCTAAAGAGGATCA TTCTGAGTCACTCTCAACACTTGACTAAATTCCCAAGGCTTTCAAAGGCCAGGAACCTTGAGCATATTGATCTCGAAGGA TGTACGAGTCTGGTTAAGGTTAACTCATCTATTCTTCATCATCACAAGCTTACTTTCTTGAGTCTGAGAAACTGTTCTCG TTTGCGAGTTATGCCTACCACTGTTCATCTAAAATCTCTTGAGGTTCTTAATCTATCTGGCTGCTCAGAGCTCGAGAACC TTCAGGATTTCTCATTAAACCTGAAAGAATTATATCTAGCTGGGGCTGCTATTAGAGAACTGCCGTCGTCGATTGGGGAT CTCACTAGACTTGTTACATTAGATCTGGAGAATTGTGAAAGTCTTCAGCACCTGCCACCGGGGATAAGTAACTTGAAAGC CATGATGACACTTAAGCTGTCTGGCTGTTCAAATCTGAAGAGCCTTCCAGTTCTTGATGCATTATTTCTCCAAGATTCAC AACGTTCTAACACAAGGATAACCATGGAAGAATCTGTGTCCATAAACCTTCACTCTGCTATTCAAGAATCAAGAGAAGCT TTAGAAGAATTCTTACCGGCATTTGAATGTCTGTCGAACAACGGAATACCACAAGAAAGCTGGACATGGGTCACTGTTAT TCCGTTCCCCTCACCCATTTTACACTCATTGGCGTCTAGGCTATATGCGCTAGTATCGTTGTTCCTTTGTAATGCTTACC TGGTGGATATACCTGAAGATATATGTTGGCTTGCTTCGGTGATGAGACTAGATCTTGGTGGAAACTCTTTCAGCCAGATT CCTAAAAGCATCAAGGAGTTTCGTAACCTACATAGCCTTAATTTGCGCCATTGCAAAAACCTCAAATCGCTACCTGAGCT TCCTAGAAGTCTAGTAACCTTGAACGCCCATGGCTGTGTGTCTCTCAAATCATTTCCAACGAGTTTCGAGCAGTTCCCAA GGCACTTCACATTCAGTAATTGCTTTAATCTGTCCCCAAAAGTGGTCAGAAAATATATAGGAAAAGCTCTTGATAGCGTT AAAGGCATGGCCAAGAGGATTCTGCAGGCTTCACTAGAACAGGAACACATCAACGCTCCTGCATTCAGCATCTGTATACC TGCCTCTGCAGGCCACCAATCCTCATTTAATTTTCAAGCTGGTTCTTTTGTAAGGAGACAGCTTACTCCCGGCATGTTAA AGACTCTTTCAGGCTTTGCTTTATCAGTAGTGGTTGAATTTTGGGATAATTATAGCAACAATGCTGGTTTTGGCATCAAG TGTATATGCAGGAAGACCAGAACAGACCTCTCACCTAGATTAGAGAGAATTTTCCGTTGTTGGGCTCCAAAGGAACCTAT CACCGTTCAAAGGGATCATATGTTTGTTTTTGGGAGTGTGAAAATGCATCATGCAGAAGCTGTTAACCATGATTTCCTGT CTGATTCAGTGACCTTTGAATTCCATCCTGTCAATTCGGAGAACCAGCTTCTAGGTGATAGCTGCACAGTGAAGAGATGT GGAGTCTACTTAATCACCGATGCGACAGGTAATACAACTCTTAGCGCAAAACGTCCTTCTTCTTCCATGGATTCAGGGGG GCTTTCTAGCATGGAGCATGTGGCACCACCATATAAGAGATGTCGATTGAAGGGAGTTATTGAAATTGTTATTTTAAGCT TAAGAAAAAGGAAGCGAGAAATGAGCGTCCCTACAGTCAAAAGCTTTTCTAAGGTAAAAAGTCTGTGCAGATCGTATGTT CGCACTGGAAACTGTGCAGTGGGTCCTAGTTGTTCTTTTGATCATCCTACATGGGTGTTTACTGAGAAACCCAAAAGACT CTCTGCGTCTAAGTCAAACCAAGCAACCTCTGGTAAAGACGCCATTGATACAGAGCAGGAAGAGGAGTAA |
| AA seq | Len:1570 aa MDRLRALRRQGLRDFEPSLPPRFMDRILDRMKKSLNRSGISRRRLERCSSSFAEDLSVSTSSFATLPDRTSFRLLAAGGD GELDRIYKSLGVSGPDDLAISFDAWEASKMRSSSGIVNRFQPQADVLSSGVDSLDRDNTGGVGRFFKEHASEKASEKEHG EMNLNPNYHDDVREDLFEICLTTIDVSNVDRLAVKANKDAGEYFLLATVVAGTDSLLRFEDEEGKTWLFGFSYLNVSQCC EFTQGWSSYVEEKQLKAGDFVSFQRDRKDSSKLFIGCRKSDESFPNPTSPGASIKTVEMRERLKGVETPFQPKLSEHSVT GSDPVLVIYCGDNQVSEEIYLISYIFNELCRRGFSPLRYDMKKGTVTENQKLLHISRVGIIIFSMNFAHFRECLDGFVAV MDHLKANELVLVPVFFKVRVSDVRGQSGSFGRAFIRLRNSVKASEVLKWRAAMIELTSISGYAYKKGDEVILAKNIVRDV CLPLSSETNMKLRGTRLSLESILSLLNRSQPSSPQIVGLWGMAGIGKTTITREFFRTQAERYDVCYFLPDFHLMCQTKGL SYLRDDFFSKIFGAEKVFVDACDTKLRFTRDRFLGKKVLIVLDGVSSAKDAEILVGGFGWFSGGHTIILTSRNRQVLVQC NAKVIYEIEKLSKLESLHLCCKFASKENCKGRMSLTSELVDYASGNPLALRVLGLSIQNQSMKDQKQHLRRLRQHPPVKI LDAFKISFNGRDGDEKSIFLDLACFFRGEDRDRVVKILDDCGFSTDLGIYGLIDESLISLLGNKIEMPNIFQDAGRFVVC QEHEEPGNRSRLWDSSDIAGVLKNNTGTEAVEGIFLDASGLTFDLSSTAFARMYRLRLLKIHCPTSVNHCKVCLPEGLHS LPDELRLLHWEKYPLGSLPRNFNPKNLVELNMPYSNLTKVWKGTKNLEKLKRIILSHSQHLTKFPRLSKARNLEHIDLEG CTSLVKVNSSILHHHKLTFLSLRNCSRLRVMPTTVHLKSLEVLNLSGCSELENLQDFSLNLKELYLAGAAIRELPSSIGD LTRLVTLDLENCESLQHLPPGISNLKAMMTLKLSGCSNLKSLPVLDALFLQDSQRSNTRITMEESVSINLHSAIQESREA LEEFLPAFECLSNNGIPQESWTWVTVIPFPSPILHSLASRLYALVSLFLCNAYLVDIPEDICWLASVMRLDLGGNSFSQI PKSIKEFRNLHSLNLRHCKNLKSLPELPRSLVTLNAHGCVSLKSFPTSFEQFPRHFTFSNCFNLSPKVVRKYIGKALDSV KGMAKRILQASLEQEHINAPAFSICIPASAGHQSSFNFQAGSFVRRQLTPGMLKTLSGFALSVVVEFWDNYSNNAGFGIK CICRKTRTDLSPRLERIFRCWAPKEPITVQRDHMFVFGSVKMHHAEAVNHDFLSDSVTFEFHPVNSENQLLGDSCTVKRC GVYLITDATGNTTLSAKRPSSSMDSGGLSSMEHVAPPYKRCRLKGVIEIVILSLRKRKREMSVPTVKSFSKVKSLCRSYV RTGNCAVGPSCSFDHPTWVFTEKPKRLSASKSNQATSGKDAIDTEQEEE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0003677 |
| Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |