Names & Information
Knowledge of BnaC01G0115400GG:
| Gene Name | BnaC01G0115400GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC01g11870D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:3930 nt ATGTCAGCACCTGGGAAGTCTGATTATTCTTCTGGTGGACCAGATAGGCCTTTATACAGGTCTAACTTAGCTTCACAGAT GGCAAGATCTAGTAGCTTTCGCGAGACTATGGAGCAACCTGTCTCATCTTCTCACGCGAGCATGTTGAGGACCACTTCAC CATTAGCACAAACCGATGTTACAAATTTCTTCCAGTGTTTGCGTTTTGATCCTAAGGTGGTTGCCGCAGATCACAAGTCT GTTCGTCAAGGTGACTTTAAGCGTCATGTGAATATTGGCCTTGGAATTCAAGGGGATGAATCTCCAAGCACAACTCCGAG AGGGAAGTTAACTCCATCCCCTATACCAGAAGAGATCAAAAGACTAAAGGCTGGTCTACGGGAAAACATCGTGAAGGCCA GGGAGCGTGTGATAATTTTCAACGAAGCTTCGTCTGTATTTAACAAGGTTTTTCCTACTGTACCCACAAAGAAAAGGTCT CGGCCAGAAGGGTTTTCCGTCGCCAGAGAAGGTTCCCCGCACCTGGTTTATCCTTTTCTTAAGATCGTCCCCAAATCTGC TCCTCCAGAATACGCCACTCTCGCAACGACCTCCTCCTCCCCGGCGGCGGCTACTTCCGGAGTTATAACGAAGCGGTCGA GGAAAGACGACGGAAAAGGACGGCGACTCAGGATACCTGCTCTTTGCGCCGCTAGGCTTTTTCAGTTAACCGGAGAGCTC GGTCATAAATCCGACGGCGAAACCATCGAGTGGCTTCTCCAGCAAGCTGCGCCGTCGCTTGTCGCCGCTACTGGCACCGG CACCATCCCGGCGAACTACTCCTCTCTAAATGTCTCCCTCCGGAGCAGCGGATCGACCCTCTCCGCGCCGCCGTCGTCGA AATCGGTGCCTCTCTACGGCGCTCCCGCAGCGTCCGGTGATCACACACCGCCTCTTTCAGGGTTTCAGAGACCGAGTAGT CTCATCAGCGAAGTGACTAAGGAGCCTGGTCCCGAGAAGAGTAGCAAGAACAAGCTAGTTTTGGAACTGGACATAAGCGG TGATAAGTCCATGCAGAAGAAGGTCATGAAGAAACTTGCTGCACTCAGTGGAATCAATTATATATCCCTAGATCCGGAGA CAGGCACCTTAACCATTAAAGGAGACATTGAATTAAATACGGTACTAGAAAAGGTGGAAAGGTATTGCAGTTGCAAAAGA GTAAAAGTTTCAGGTGAGCCCGCCATGATGGCCGAGCCAAAGAAAATGTATAAAAGGGGAGTTTCGCAAGGGAGGGTTTC TATGGGAAAGGCACTCACTAGTGAGCAAAGTCTGCGATCAACCGCAGGTTCAGGCGACTCATGCTCAGGGATCAACATTC CAGGAAAATCAATCATCACACCTCCTAACGTGAGGAACCTAGATGCTGATTGGTACTCCTTCTGTGATTTCCTTGACCAA CGCATGCGTCCATTGACTCTCTCTGGGTGCACAGCCAAAGACGCCATTGATTTTCTCCGCATGCGGCAGACTTCAGGCAA CGCAGAGGCCCTTGTTGGCCGCCTCAGTGCTGCATGTGAGGCATACGGCATAACACCCAAGGAAAATCCTTTCCGCAGCT TAGCTGTAATATCATACGTGAAGGAGACGAGGGAGATTACTCGAGAAGCAGACTACGTATTAGTTTTTTCGTGCAATGAC AACCTTGATGAGGACGAGACACATTTAATTGAAGCCATCTCGAAAGAGTTACACGAGCGAGAGGTTGCTCCTTTGACATA TAATCTATCTCAGAGAGAGAACCTAGATGGGGACATGCTTTACAGATCCAGTGTTGGTCTAATGGTAGTTTCAAGTAGTT TGGCCTATAGTAGTCAGTCTCTAGATCATTTGGCGGCGATCATGGAATTTTGTAAAGCAAAACACCTTGTTATTATTCCT GTATATCTCAAGGTAACACCTTCTGACATTTGTGGTTGGGAAGACCGTTTTGAACAAGTACTTCCGTCGTATTTAAATTC TATCCAGCCAGACAGAATCCAGAAATGGAAGGCGGCTCTGACTGATGTGGCATCCATTGATGGACATCAATGGTCAGAAG GGAGTCAATTTATGCTTGCCAAGAAAGTTGTAAGGAACGCATGCTTCAGGCTACATTTGAAAAGCAGCAAGAACCTGGTC AGAATCTTAGCATTGTTAAATCACCCCCAGCCTTTAGAGGCGGAAATTGAGGGAATCTGGGGCATGGCAGGAATAGGGAA GACATCCATTGCTAGAGAAATTTTTGAATTACTAGCTCCACAATATGATTTGTGCTACTTTCTGCAAGACTTTCATCGTA TGTGTAAGAGCAAAGGGTTGAGGCAAATACGTGATGATTTCCTCTCTAAAGTATTTAGAGAAGAAGAACTATGTCTAGGC GCTTGTGATACAAAACCGAGTTTCATGAGGGACTGGTTCCAGAATAGAGAGATTCTCGTTGTTCTCGATGACGTGAGTAA TGCAAGAGATGCAGAATATGTATTTGGAGGGTTTAGCTGGTTTTCTCGTGGGCACCGAATCATTTTAACCTCTAGGAGTA AACAAGTTCTTGTGCAGTGTAAGGTTAAAGAGCCATACGAGATTCAAAAGTTATCCGATTTTGAATCTTTACGTCTCTGC AAACAGTATTTAAAAGAAGAAAGTGCCATCATGTCCGAGCTAATGAGCTGCAGTAGCGGTATACCACTGGCTCTCAAGAG TTTTGTTTCCTCTGTATCGAAGCAGCATATGAACGATATGAAGAAACATCTTCAAAGCTTGCGGATAAACCCTCCAACCA AGATTCAGGAGGCATTTCGGAGAAGCTTTGATGGACTAGACGAAAACGGAAAGAACATATTTTTGGACCTTGCATGTTTT TTCAGAGGGGAGAACAAAGAGCATGTGGTGCAATTACTTGATGCGTGCGGTTTTTTTACATATCTTGGAATTTGTGATCT CATTGACGAGTCTCTCATTAGCCTTCTGGACAATAAAATAGAGATCCCTATTCCTTTTCAAGATATTGGTCGATTTATTG TTCGTGAAGAAGACATGGATCCATGTGAACGTAGCAGATTGTGGGACTCTAACGACATCATTGATGTATTGACAAACAAT TCAGGAACAGAAGCGATTGAGGGAATCTTCCTGGATGCGTCTGACTTGACCTGTGAATTAAGTCCTACTGTGTTTAGTAA CATGTACAGACTTAGATTGTTGAAGTTTTATTGTTCCAACACCTCTGGGAACCAGTGCAAGCTAAGTCTACCACAAGGCC TCGACACTTTGCCTGATGAGCTACGGCTACTTCACTGGGAGCATTACCCTTTAGGATACTTGCCTCAGAAATTTAGTCCG GAGAACCTTGTAGAGATAAACATGCCGTATAGCAACATTGAGAAGTTATGGGAAGGGAAGAAAAATCTCGAGAAGCTAAA GAAAATCAAACTGAGTCACTCCAGAAAATTAACTGATGTCCTGACGTTATCAGAAGCCATGAACCTTGAACATATTGATT TCGAAGGGTGTACGAGTATGATTGACGTTAGCACATCTATTACTCATCTTGGGAAGCTTGTTTCGTTGAATATGAAAGAC TGTTGTCATTTGCGAAGTCTGCCTTCCATGGTCGATCTAACTTCTCTCAAGCTTCTTAATTTGTCTGGCTGCTCAGAGCT TGAGGATATTCAGGATTTTTCACCAAACCTGGAAGGGCTATATCTGGCTGGGACTGCCATAAGGGAACTTCCATTTTCAG TCGAGAATCTTACTGAACTTAGTACGCTGGATCTGGAGAACTGCGTAAGGCTTCAGAAACTGCCATCCGGAGTAAGGAAC TCGAGATCTATTGTCAACCTTAAGCTGTCTGGCTGCACAATTCTTGAGCTTGGGAAGCGGAAAAGGAACGTTGCTCCCAA ACGAGTGTGA |
| AA seq | Len:1310 aa MSAPGKSDYSSGGPDRPLYRSNLASQMARSSSFRETMEQPVSSSHASMLRTTSPLAQTDVTNFFQCLRFDPKVVAADHKS VRQGDFKRHVNIGLGIQGDESPSTTPRGKLTPSPIPEEIKRLKAGLRENIVKARERVIIFNEASSVFNKVFPTVPTKKRS RPEGFSVAREGSPHLVYPFLKIVPKSAPPEYATLATTSSSPAAATSGVITKRSRKDDGKGRRLRIPALCAARLFQLTGEL GHKSDGETIEWLLQQAAPSLVAATGTGTIPANYSSLNVSLRSSGSTLSAPPSSKSVPLYGAPAASGDHTPPLSGFQRPSS LISEVTKEPGPEKSSKNKLVLELDISGDKSMQKKVMKKLAALSGINYISLDPETGTLTIKGDIELNTVLEKVERYCSCKR VKVSGEPAMMAEPKKMYKRGVSQGRVSMGKALTSEQSLRSTAGSGDSCSGINIPGKSIITPPNVRNLDADWYSFCDFLDQ RMRPLTLSGCTAKDAIDFLRMRQTSGNAEALVGRLSAACEAYGITPKENPFRSLAVISYVKETREITREADYVLVFSCND NLDEDETHLIEAISKELHEREVAPLTYNLSQRENLDGDMLYRSSVGLMVVSSSLAYSSQSLDHLAAIMEFCKAKHLVIIP VYLKVTPSDICGWEDRFEQVLPSYLNSIQPDRIQKWKAALTDVASIDGHQWSEGSQFMLAKKVVRNACFRLHLKSSKNLV RILALLNHPQPLEAEIEGIWGMAGIGKTSIAREIFELLAPQYDLCYFLQDFHRMCKSKGLRQIRDDFLSKVFREEELCLG ACDTKPSFMRDWFQNREILVVLDDVSNARDAEYVFGGFSWFSRGHRIILTSRSKQVLVQCKVKEPYEIQKLSDFESLRLC KQYLKEESAIMSELMSCSSGIPLALKSFVSSVSKQHMNDMKKHLQSLRINPPTKIQEAFRRSFDGLDENGKNIFLDLACF FRGENKEHVVQLLDACGFFTYLGICDLIDESLISLLDNKIEIPIPFQDIGRFIVREEDMDPCERSRLWDSNDIIDVLTNN SGTEAIEGIFLDASDLTCELSPTVFSNMYRLRLLKFYCSNTSGNQCKLSLPQGLDTLPDELRLLHWEHYPLGYLPQKFSP ENLVEINMPYSNIEKLWEGKKNLEKLKKIKLSHSRKLTDVLTLSEAMNLEHIDFEGCTSMIDVSTSITHLGKLVSLNMKD CCHLRSLPSMVDLTSLKLLNLSGCSELEDIQDFSPNLEGLYLAGTAIRELPFSVENLTELSTLDLENCVRLQKLPSGVRN SRSIVNLKLSGCTILELGKRKRNVAPKRV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Heavy-metal-associated domain |
| KEGG | RRS1; disease resistance protein RRS1; K16225 probable WRKY transcription factor 52 (A) |