Names & Information
Knowledge of BnaC01G0126300ZS:
| Gene Name | BnaC01G0126300ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC01g11870D [Brassica napus] |
| Best Hit (SwissProt) | Inactive disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=3 SV=1 |
| NT seq | Len:5193 nt ATGTCAGCACCTGGGAAGTCTGATTATTCTTCTGGTGGACCAGATAGGCCTTTATACAGGTCTAACTTAGCTTCACAGAT GGCAAGATCTAGTAGCTTTCGCGAGACTATGGAGCAACCTGTCTCATCTTCTCACGCGAGCATGTTGAGGACCACTTCAC CATTAGCACAAACCGATGTTACAAATTTCTTCCAGTGTTTGCGTTTTGATCCTAAGGTGGTTGCCGCAGATCACAAGTCT GTTCGTCAAGGTGACTTTAAGCGTCATGTGAATATTGGCCTTGGAATTCAAGGGGATGAATCTCCAAGCACAACTCCGAG AGGGAAGTTAACTCCATCCCCTATACCAGAAGAGATCAAAAGACTAAAGGCTGGTCTACGGGAAAACATCGTGAAGGCCA GGGAGCGTGTGATAATTTTCAACGAAGCTTCGTCTGTATTTAACAAGGTTTTTCCTACTGTACCCACAAAGAAAAGGTCT CGGCCAGAAGGGTTTTCCGTCGCCAGAGAAGGTTCCCCGCACCTGGTTTATCCTTTTCTTAAGATCGTCCCCAAATCTGC TCCTCCAGAATACGCCACTCTCGCAACGACCTCCTCCTCCCCGGCGGCGGCTACTTCCGGAGTTATAACGAAGCGGTCGA GGAAAGACGACGGAAAAGGACGGCGACTCAGGATACCTGCTCTTTGCGCCGCTAGGCTTTTTCAGTTAACCGGAGAGCTC GGTCATAAATCCGACGGCGAAACCATCGAGTGGCTTCTCCAGCAAGCTGCGCCGTCGCTTGTCGCCGCTACTGGCACCGG CACCATCCCGGCGAACTACTCCTCTCTAAATGTCTCCCTCCGGAGCAGCGGATCGACCCTCTCCGCGCCGCCGTCGTCGA AATCGGTGCCTCTCTACGGCGCTCCCGCAGCGTCCGGTGATCACACACCGCCTCTTTCAGGGTTTCAGAGACCGAGTAGT CTCATCAGCGAAGTGACTAAGGAGCCTGGTCCCGAGAAGAGTAGCAAGAACAAGCTAGTTTTGGAACTGGACATAAGCGG TGATAAGTCCATGCAGAAGAAGGTCATGAAGAAACTTGCTGCACTCAGTGGAATCAATTATATATCCCTAGATCCGGAGA CAGGCACCTTAACCATTAAAGGAGACATTGAATTAAATACGGTACTAGAAAAGGTGGAAAGGTATTGCAGTTGCAAAAGA GTAAAAGTTTCAGGAAAATCAATCATCACACCTCCTAACGTGAGGAACCTAGATGCTGATTGGTACTCCTTCTGTGATTT CCTTGACCAACGCATGCGTCCATTGACTCTCTCTGGGTGCACAGCCAAAGACGCCATTGATTTTCTCCGCATGCGGCAGA CTTCAGGCAACGCAGAGGCCCTTGTTGGCCGCCTCAGTGCTGCATGTGAGGCATACGGCATAACACCCAAGGAAAATCCT TTCCGCAGCTTAGCTGTAATATCATACGAACGTTGCTCCCAAACGAGTGTGAGTGACAAAAACTCAGGCCTTTTTGGAAA AGTCAACAAAGTTGTGCTGAATGCAAAGATAATAAAGCTTTGTGGAAAAGATGTTTTAGTCAACGGCTCAGAGTCTCCGT CTTTCCCAAATCGTATAATGGCTTCTGCCTCGTCTTCCTCCAAGCGCCAGTTCGACGTGTTTGTGAGCTTCAGAGGCGCT GACACGCGTACCAACTTCACTTCTTACCTCCGTCAGTCCCTACACCGGAAAGGCATCGATACTTTCTTTGATGAGAAACT CCGGCGAGGCCAGGATCTCTCGGTCCTCTTTGACAGGATCGAGCAATCGAAGATGTCCATCGTCGTCTTCTCGGAGAACT ACGCCAACTCCACCTGGTGCTTGGAGGAACTCTGGAAGATAATGCAGTGCAGGGAGAAAAGAGGTCACGGTGTGATACCC ATTTTTTACAAAGTCAAGAAGTTTGATGTGGAGAATCAGAAAGGGAGTTTTGAAGCTCCTTTCAAGAACCCTAAGGAGTG TCTCAAGGGAGATGGGCAGAAGGTTGGGGCCTGGAAGGAAGCTCTGAGGGCTGCTTCCAATATACTAGGCTTTGTGCTTC CTGAAGAAAGGCCGGAGAGTGAATTTGTTGAGAAAATAGCCAAGGAAACTTTCAGGATGCTGAATGATCTGTCTCCATGT GAGATCAGTGGTTTCCCGGGGATTGAGTCACGTTCAAAGAAACTGGAGGAGTTATTGATGTTTGATAATGCAAACTGTGT CCGTGCCATTGGGGTTCTCGGCATGACTGGAATCGGCAAGACGAAGGTTGCTGATAGCGTATATAAACGAAACCACCGTC AGTTTGATGGCTACTATTTCCTTGAAGACGTTGACAAGGAGCTGGAATGGCATACATTAAGTTATTTGCGGGAGAAACTC CTCTGTAAGTTATTGGATGAAGAAGATTTGGATGTCAGAGCGCTTGGAAGATTGGAAGACTTTCTAAGGAACAAGAAGGT GTTTATTGTGCTGGATAATGTGACCAAAGAAAACCAAATCAAAGATCTCATTGGGCCGCTGGAGCAGTACCGGAAAGGAA GTAGGATTGTTATAACAACCAGAGACAAGAAACTGCTGCAGAACAACACTGATGCAACATATTTAGTTCCCAGGTTAAAC GACTGGGAAGCTATGGAGCTTTTCAGCATTGGTGCATTTCCTGAAAACCTCTACCCACCGGAAGAATTTCTGGATCTATC AAACAAGTTTGTTTATTATGCTAAAGGGCATCCGTCAGCTTTGAAGTTATTAGGCTCAGGTCTATGCAAGAAGGAAAAAA CATACTGGATGGAGAAATGGGAGAGATTAAGGGTAATGCCAGACAAGGAGATTCAGAAAGAGCTAAAAAGGAGCTATGAA GAACTGGATGATGAACAGAGGAGCATATTCCTGGACATAGCATGTTTTTTCAGATCTGAAAAAGCAGACTTCGTTTCCAG CATTCTGGAATCAGACCGTGTCAATGCTGCAGCTGTGATGAGAGAACTTGAAGATAAGTGCTTGGTGACCATTTCGTATA ATCGGCTTGAGATGCATGATCTAATGCATGCAATGGGGAAGGAAATCGGAAGTGAATCGTCCATCAGAAGGGCAGGCAAA CGTAGTAGATTGTGGAACCACAAAGATATTCGTCATGTGCTGGAGCAGAGAACGGGAACAGAATGTGTTAGAGGCATCTT CTTCAACATGTCTAATGTCGAAAAGATCAAACTAAGCCCTGACGTTTTCATAAGGATGTCGAATCTCAAATTCCTGAAAT TCCACAATTCTCATTGTTCCCAGTGGTGTGACAATGACCATAAGTTTCAGTTCTGCGAAGGGCTTGATCACTTTCCAGAT GAGCTTGTGTACCTCCACTGGCAAGGGTATCCTTACAATTGCTTGCCATCAGAATTTAATCCAGAAGAACTTGTCGATCT TAATCTGCGTTATAGCCACATCAAACAACCGTGGGAAACTGAAAAGAACACAGAAAATCTAAGATGGGTCGACCTCAGTC ATTCAAAGGGCTTGCTGAACTTATCAGGTTTGTCCAAGGCCAAAAATCTTGAACGACTGGATCTTGAAGGCTGTACGAGT TTGGCTGCGTTGGGCTCATCAATAGAACAGATGAACAAACTTATTTACTTGAACCTCAGAGAGTGCACAAGCCTAGAGTG TCTTCCAGAGGGAATCAACTTAAAATCTCTGAAGACTCTGATCCTCAGTGGCTGCTCAAACCTTCAAAAGTTTCAAATCA TATCAGAAAATATTGAATCTCTTTATTTGGAAGGCTCAGCAATCAAGCAAGTCGTTGAACACATTGAGAGTCTTTGCAAT CTTATTTTACTGAATCTCAAGAATTGTCGCAGGTTGAAGTCACTTCCCAACGATCTTTACAAGCTGAAATCTCTTCAAGA ACTCATCCTCTCTGGCTGTTCAGCGCTGGAGAGTCTTCCACCCATCAACGAGGAAATGGAATGCTTAGAGATTTTGCTTA TGGATGGAACATCCATCAGACAGACACCTGAAATGATTTGCTTGAGTAACCTCAAGCTGTTTTCCTTCTGTGGATCTAGC ATAAAAGGTTCCACATGGTTGGTATTGTTGCCTTTCTCAGGCAACTCTTGCTTATGGGACCTCTATCTCACGAATTGCAA TATCTACAAACTGCCGGATAACTTTAGCTCCTTACGCTCGTTGCGATGCCTATGCTTAAGCAGAAACGATATAGAGACCT TACCTGAAAGCATCGAGAAACTTTATTCTCTGTTGTTGCTTGACTTGAAACATTGCCGCAACCTCAATTCTCTCCCGGTG CTTCCACCTAATCTACAGTATGTAGATGCTCATGGATGTGTTTCTCTGGAAAAAGTTGCCAAACCAGTGACGCTTCCCTT GGTAACTGAGAGGATGCATACTACTTTCATATTCACGGATTGCTTCAAGCTCAACCGAGCTGAACAGGAAAGTATTGTAG ATCAAGCCCAACTCAAGAGCCAGCTACTAGCAAGGACATCTCTTCAACATAATCATAAGGGACCAGTTACGGATCCTCTG GTTGCCGTTTGCTTTCCAGGAAGTGACATACCTTCATGGTTATGTAATCAGAGAATGGGATCTTCCATAGAAACCGACCT GGTTTCACACTGGTGTAACAGTAAATTTATAGGAGTTTCCCTATGTGTTGTTGTCAGCTTCGAGGGCCATGAAAGTTGTT ATGCCAACGGCTTATCTGTAAGATGCAAGTGCGAATTCAAAAATCAAAACGGTCAGTCTATCAGCTTTAGTTTCTGTCTT GGGGGATGGAACGAGTCATGTGGATCATCTTGTCATGAACCACGGAAACTTGGATCTGACCATGTTTTCATCAGTTATAA CAAGTTCAAAGTGCCAGTCTACCGATGGAGTGAAGAGAGTAACGAGGGCAATAGATGTCGTCCCACTAGTGCCTCGTTTG AATTCTACCTTACTGATGACACTGAAAGGAAACTAGAAAGCTGCAAGGTGACAAGGTGTGGGATGAGTTTGCTATATGAT CCAGATGAGAACGACCGTGGATTCCAGGGAACACGGGTTACAGATATTGTTGAGCGTACATCGAGTGAAGCTTTTGTGCC CGTGAAAGGTCTGTCTCTCTCGCAAGTTGGAGCAAGAAGGAATGGTATAATAAGAGATGAAATCCCCATGTGA |
| AA seq | Len:1731 aa MSAPGKSDYSSGGPDRPLYRSNLASQMARSSSFRETMEQPVSSSHASMLRTTSPLAQTDVTNFFQCLRFDPKVVAADHKS VRQGDFKRHVNIGLGIQGDESPSTTPRGKLTPSPIPEEIKRLKAGLRENIVKARERVIIFNEASSVFNKVFPTVPTKKRS RPEGFSVAREGSPHLVYPFLKIVPKSAPPEYATLATTSSSPAAATSGVITKRSRKDDGKGRRLRIPALCAARLFQLTGEL GHKSDGETIEWLLQQAAPSLVAATGTGTIPANYSSLNVSLRSSGSTLSAPPSSKSVPLYGAPAASGDHTPPLSGFQRPSS LISEVTKEPGPEKSSKNKLVLELDISGDKSMQKKVMKKLAALSGINYISLDPETGTLTIKGDIELNTVLEKVERYCSCKR VKVSGKSIITPPNVRNLDADWYSFCDFLDQRMRPLTLSGCTAKDAIDFLRMRQTSGNAEALVGRLSAACEAYGITPKENP FRSLAVISYERCSQTSVSDKNSGLFGKVNKVVLNAKIIKLCGKDVLVNGSESPSFPNRIMASASSSSKRQFDVFVSFRGA DTRTNFTSYLRQSLHRKGIDTFFDEKLRRGQDLSVLFDRIEQSKMSIVVFSENYANSTWCLEELWKIMQCREKRGHGVIP IFYKVKKFDVENQKGSFEAPFKNPKECLKGDGQKVGAWKEALRAASNILGFVLPEERPESEFVEKIAKETFRMLNDLSPC EISGFPGIESRSKKLEELLMFDNANCVRAIGVLGMTGIGKTKVADSVYKRNHRQFDGYYFLEDVDKELEWHTLSYLREKL LCKLLDEEDLDVRALGRLEDFLRNKKVFIVLDNVTKENQIKDLIGPLEQYRKGSRIVITTRDKKLLQNNTDATYLVPRLN DWEAMELFSIGAFPENLYPPEEFLDLSNKFVYYAKGHPSALKLLGSGLCKKEKTYWMEKWERLRVMPDKEIQKELKRSYE ELDDEQRSIFLDIACFFRSEKADFVSSILESDRVNAAAVMRELEDKCLVTISYNRLEMHDLMHAMGKEIGSESSIRRAGK RSRLWNHKDIRHVLEQRTGTECVRGIFFNMSNVEKIKLSPDVFIRMSNLKFLKFHNSHCSQWCDNDHKFQFCEGLDHFPD ELVYLHWQGYPYNCLPSEFNPEELVDLNLRYSHIKQPWETEKNTENLRWVDLSHSKGLLNLSGLSKAKNLERLDLEGCTS LAALGSSIEQMNKLIYLNLRECTSLECLPEGINLKSLKTLILSGCSNLQKFQIISENIESLYLEGSAIKQVVEHIESLCN LILLNLKNCRRLKSLPNDLYKLKSLQELILSGCSALESLPPINEEMECLEILLMDGTSIRQTPEMICLSNLKLFSFCGSS IKGSTWLVLLPFSGNSCLWDLYLTNCNIYKLPDNFSSLRSLRCLCLSRNDIETLPESIEKLYSLLLLDLKHCRNLNSLPV LPPNLQYVDAHGCVSLEKVAKPVTLPLVTERMHTTFIFTDCFKLNRAEQESIVDQAQLKSQLLARTSLQHNHKGPVTDPL VAVCFPGSDIPSWLCNQRMGSSIETDLVSHWCNSKFIGVSLCVVVSFEGHESCYANGLSVRCKCEFKNQNGQSISFSFCL GGWNESCGSSCHEPRKLGSDHVFISYNKFKVPVYRWSEESNEGNRCRPTSASFEFYLTDDTERKLESCKVTRCGMSLLYD PDENDRGFQGTRVTDIVERTSSEAFVPVKGLSLSQVGARRNGIIRDEIPM* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Heavy-metal-associated domain |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |