Names & Information
Knowledge of BnaC01G0152600GG:
| Gene Name | BnaC01G0152600GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103861120 [Brassica rapa] |
| Best Hit (SwissProt) | Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14 PE=2 SV=1 |
| NT seq | Len:1677 nt ATGACGAACTTCTCTCGTTCGTGGAAACATGATCAAGTGTTCATCAGTTTCAGAGGTAAACCTCTAAGAAAAAAATTTGT GAGCCATCTAAAAGAAGAATTAAAGAGGAGAAAAATCAACTTTTTCATTGACGAGGATGAGACGAGAGGGAGACGGATAA CAACACTCTTTGAAACAATCAGAGAGTCAGAGAAGTCTCTGATGCATCCCCAGGAGGCATTAACGTCCTTATTACAAGCT CTAAACATTAAGAAGTCAGATCTTGAAGATCTTATTACAAGGCCGTTTATTCAGACCAGAGGCACTGATCATCTGGTTTT TCTTGACCTGATCTCTCTTAAAAATCCTATCCTCGGTCAGCGGCTAATCAAGCGTGTTCAGGATGGAATGATTTTCTTGG TGTTGCTAGGTTCTGTTGACGGCTCCGTTGAGGATGTTGATTTCAAGCCTCGCTTGTTGTCCAGGAAACCTCGACTATTT CCTGGTAACAAGCTTATTGTCTCCCCTCAAGAAATTCAAGAGCAAAGCTACTTTTCACCAGTTCAAGTCAGCACGGAATA TGCAGATGTGTTAGCAATGGCAGAGAGTAATGAAAATACTCGGAATCGTCTTGGTGTAGATAAAAACTCCGATTGTTCTT TGACCTGCTTTTCATTGTTATGCAACATTATGAAACGTTTTGAAATGATGATAAATCCTCCTCCGCCTAGAGTGTTCATC AGTTTCGGCGAGAAGCAGCTCGAAATGAACCTAGTAAGTTCTCTGAAAACAGAATTTGAATCAAACGAAATCTCGGTATA TATAGAAGATGAGACAAAGGAGAGGATCAAAGAGTCAAAGGTTGCAATAGTTGTCTTCTCAGACAAGTACCCTGAGTCAC CAGAGTGTCTTGATGAGCTCGTTGAGATCAAGAAGCTTATGGACGTAGGAGAGATCACTCCCTTCCCTATTTTCTACAAG CTAAAGGATGTTCCTAGGCTAGCTCAATCAGTTAAACAACTGAAGGGTTGTTTCCGTAATAGGCTTCTCAAGATAGAACA AGAAGTGCGCAAAACCGTCAATAGGGACAATGTGAACTCTATACTAGATACCGAAGCTAGAATCTGGGAATGGAGACAAG CTATCTCGTCCATTTCCTCAAGACCAGGCTTGAGCAATGAAAATAGCTCTGATCCAGTGTTCTTCACTGATGTCGTGACC AAGGTCAAAAAACTGTTTGAATTTAAGGCTATACCGAAGAAGTCAAGTTCCTATATAATTACTAATCAAGTGATTGAAGA AAAGCCTATAATGCATCGACAGAAGACAGCACCAGCAATACCAACAGTCAAATCCGTAGATGATGACTTATTCTACTCCC TACCTTCGTTCTTACAAGCTCTAGACCTTGAAATTACTGACTTTGAGGGCTTCACCGAGATGCACAGTGGTCTCATATCT CTGAGCCTAAAAAGACACAGTAATCTAGTATGTCTGAACTTGGGTTCTCTTGAAAAGCTCGTCCATTTTCGGTGTTCTGA CTCATTCGAATTCCTTAGTCAGGGTTTTGGTCTGAATCATCCCGGTATCAGCAGATTTGAAGAGCCTTCCCGGGTCCTTG AAATAGAATCATCTCAACCCCAACAACGGTTTGATAACGTCTTATCGTCTCATCTCAAAATCACCAATATCACATAA |
| AA seq | Len:559 aa MTNFSRSWKHDQVFISFRGKPLRKKFVSHLKEELKRRKINFFIDEDETRGRRITTLFETIRESEKSLMHPQEALTSLLQA LNIKKSDLEDLITRPFIQTRGTDHLVFLDLISLKNPILGQRLIKRVQDGMIFLVLLGSVDGSVEDVDFKPRLLSRKPRLF PGNKLIVSPQEIQEQSYFSPVQVSTEYADVLAMAESNENTRNRLGVDKNSDCSLTCFSLLCNIMKRFEMMINPPPPRVFI SFGEKQLEMNLVSSLKTEFESNEISVYIEDETKERIKESKVAIVVFSDKYPESPECLDELVEIKKLMDVGEITPFPIFYK LKDVPRLAQSVKQLKGCFRNRLLKIEQEVRKTVNRDNVNSILDTEARIWEWRQAISSISSRPGLSNENSSDPVFFTDVVT KVKKLFEFKAIPKKSSSYIITNQVIEEKPIMHRQKTAPAIPTVKSVDDDLFYSLPSFLQALDLEITDFEGFTEMHSGLIS LSLKRHSNLVCLNLGSLEKLVHFRCSDSFEFLSQGFGLNHPGISRFEEPSRVLEIESSQPQQRFDNVLSSHLKITNIT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | hypothetical protein; K04646 clathrin heavy chain (A) |