Names & Information
Knowledge of BnaC01G0153300GG:
| Gene Name | BnaC01G0153300GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC01g15240D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:2175 nt ATGACGAAATTCTCTCGGTCGTGGAAACATGATCAAGTGTTCATCAGTTTCAGAGGCGAAAGTCTAAGAAAGAATTTAGT GAGCAATCTAATAGAAGAATTTAAGAGGAAAAAAATCAATTATTTCATTGACGAGGATGAGACGAGAGGGCGTCCGATCA CAACACTCTTCAAACGAATCAGAGAGTCAGGTGTTGCACTCATCCTCTTCTCAAACACGTACCCCGAGTCATACTGGTGC TTAGACGAGCTTGCTGAGATCAAGAAGCAAGTAGAGATAGGTAATCTTAACGCTTTTCCAGTATTCTACGAAGTGGCACC TGACTCTGTCAAGAGACAGACTGGTTCCTTCGGCAGCAACCTACTCAAAACGGCGGATTTGGTTCGCTACCAAGTTGATC GGGGAAGCTACGAGTCGATACTTGAAACAGAGGCTTGGATTTGGGGATGGAGGGAAGCTTTAGTCTATATTGGAGGTATA CTAGGCTCTCCTCATAAGAAAGGAGGCCCTGAGGGGCCTCTAGTTACTGATATTGTGAAGGCAGTAACGTCTTTATTACA AGCTCTAAACCTTAAGAAATCAGTTCTTAAAGATCTTATTACCAAACCGTCCATTCATTCCGTTTCCATGATACTTGATG ATCTGGTGTTTCTTGACCTGATCTCTCTCAAGAATCCTGAACTCGGTCAGGGATTAACCAAGCATGGTCAAGCTGGAAGT ATAATCTTGTTGTTGCTAGGTTCTCTTGACGAATTTGAGTTCCAGCCTCTTTTGTTGTCCAAGAAACCTCAACGGTTTCC TGGTAACAAACCTGTTGTCTCTCAAGAAATTCAAGATCAAAGCTACCCGTCACCAGTTCAAGTCACTAACGTGTTAGCAA CGGTAGAGAGTAATGACAATACTCGGAACCGTCTTGGTGATGATAAAAACTCGGATGATGATACTTTGGCCTGCTTTACA TTCTTATGCAACATTATGAAACATTGTGCAATGATGATGAGACCTCCCCCGGATAGAGCGGTCATCAGTTTCGGTGAGGA GCAGCTTGAAGAAACCCTAGTGAGCTCTCTGATAAGCCCTCCCCCGGATAGAGCGTTCATCAGTTTCGGAGATAAGCAGC TTGAAAAAACCCTAGTGAGCTCTCTTAAAATAGAACTTGAAGCGAAAGGAATCTCGGTATATGTAGAAAATGAGACGAAG GAGAGGATCAAAGAGTCAAAGGTTGCAATAGTTGTCTTCTCAGCCAAGTACCCTGAGTCACCACAGTGTCTTGATGAGCT CTTTGAGATCAAGAAGCTTATGGACGCAAGAGAGATCGATCCCTTCCCCATTTTCTACAAGATGGAAAATGTTTCTAACC TAGCTCAATCAGTTAAGCTAATACAAGGCTGGTTCCTTTATAGGCTTCTCAAGATAGAGCAAGAAGTGCGGAAAGACGTC AATAGAAAAAGTGTGAAGTCTATACTTGATACCGAAGCTAGAATCTGGGGATGGAGACAAGCTATCCGCTCTGATCCTTT GTTCTTGACTGCTGTTATGACCAAGGTCAAGGAAATGTTTGAATTTAAGGACAGACCGAAGAAGTCTAGTCAAATGATTG AAGAAACGCCTCTAATGCATCAGCATGATGACTTGTTCTACTCCCTAGCTTCGTTCTTACAAGCACTAAACCTTGAAAAT ACAGATCTTGAAGGCTTCAGGGAGCACAATGGTCTCATATCGCTGAGCCTAAAAAGATACCCTAATCTAGGTCTTGGTAT GAATCATCACAGTATCAGCAGATTTGAAGAGCCTTCTTGGGTCCTTGTCTCATCTCAGAATCACCAATATCACATTAACC AGGTTCAAAACCCTAGTAGTAGACATGTTGCTAGTCCCACTACGCCGCAAAGATCTTTACTGGCTTTTGCTCCTCCTGAT ACTCCTCTAGGAGTAGCTGATGACACCTCTAGCACTGTTGTTCAACTCCTCCTGTCACTACGAGTGAACTCACTACTACT AATTTGCGGATCTCCAGGGCTGATGCTTTTTCCTAAAGAAGGTGGTTGTGTGCTGTACAACCCAAAGAAGGCACGTTCCA AAGGAAACTGGGAGACTTTTCAGGGTGTCGATTCCTGGCAAACTCGGGTAACTGGCTCTTGTTGTTGGATTCAGGATCCA ATTTGTACATCGTAG |
| AA seq | Len:725 aa MTKFSRSWKHDQVFISFRGESLRKNLVSNLIEEFKRKKINYFIDEDETRGRPITTLFKRIRESGVALILFSNTYPESYWC LDELAEIKKQVEIGNLNAFPVFYEVAPDSVKRQTGSFGSNLLKTADLVRYQVDRGSYESILETEAWIWGWREALVYIGGI LGSPHKKGGPEGPLVTDIVKAVTSLLQALNLKKSVLKDLITKPSIHSVSMILDDLVFLDLISLKNPELGQGLTKHGQAGS IILLLLGSLDEFEFQPLLLSKKPQRFPGNKPVVSQEIQDQSYPSPVQVTNVLATVESNDNTRNRLGDDKNSDDDTLACFT FLCNIMKHCAMMMRPPPDRAVISFGEEQLEETLVSSLISPPPDRAFISFGDKQLEKTLVSSLKIELEAKGISVYVENETK ERIKESKVAIVVFSAKYPESPQCLDELFEIKKLMDAREIDPFPIFYKMENVSNLAQSVKLIQGWFLYRLLKIEQEVRKDV NRKSVKSILDTEARIWGWRQAIRSDPLFLTAVMTKVKEMFEFKDRPKKSSQMIEETPLMHQHDDLFYSLASFLQALNLEN TDLEGFREHNGLISLSLKRYPNLGLGMNHHSISRFEEPSWVLVSSQNHQYHINQVQNPSSRHVASPTTPQRSLLAFAPPD TPLGVADDTSSTVVQLLLSLRVNSLLLICGSPGLMLFPKEGGCVLYNPKKARSKGNWETFQGVDSWQTRVTGSCCWIQDP ICTS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | hypothetical protein; K04646 clathrin heavy chain (A) |