Names & Information
Knowledge of BnaC01G0166600ZS:
| Gene Name | BnaC01G0166600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA01g13140D [Brassica napus] |
| Best Hit (SwissProt) | F-box protein At2g14500 OS=Arabidopsis thaliana GN=At2g14500 PE=2 SV=1 |
| NT seq | Len:2025 nt ATGAAGATATCTTCTTCCCTCAAACGAAGCTGGAGCTCGCCGGATCTACGTCCGAGGAGTCTAAGGCGGACAATCCCCCA GTTTAGCCGATCTCCAGGGCTGATGCTTTTTCCGAAGGACGGTGGGTTTGTGCTGTACGACCCTAAAGAAGGCAATATCC AGAGGAACGTGGGAGACTTTTCAGGGTGTCGATTCCTGGCAAACTCGGGTAACTGGCTCTTGGTGTTAGATTCTAGATCC GATTTGTACATGGTGGATGCGTTTAGCGAGAAAAAGAAGATCCCTCTTCCGTCTCTAGATTCGATTAAGTCAGCTGATTG TATTGTCAAGCGCGTGGGAGATAGAGAATTTATAAGGGATGAGTCTGGCGCTATTTACAAGGATCTGAGTGCTGATGTGA GCCAGACTGGTTGCTTCGGTAACACTCTCCTTAAAACTGAGAATAAAGTTCGCAGAAAAGTTGATCGTGGAAGCTACAAG TCCATACTTGAAACAGAGGCTAGGATTTGGGGATGGAGGCAAGCTTTAGTCTATATTGAGAAGTCTCTGATGCATCCCCA GGAGGCATTAACGTCCTTATTACAAGCTCTAAACATTAAGAAGTCAGATCTTGAAGATCTTATTACAAGGCCGTTTATTC AGACCAGAGGCACTGATCATCTGGTTTTTCTTGACCTGATCTCTCTTAAAAATCCTATCCTCGGTCAGCGGCTAATCAAG CGTGTTCAGGATGGAATGATTTTCTTGGTGTTGCTAGGTTCTGTTGACGGCTCCGTTGAGGATGTTGATTTCAAGCCTCG CTTGTTGTCCAGGAAACCTCGACTATTTCCTGGTAACAAGCTTATTGTCTCCCCTCAAGAAATTCAAGAGCAAAGCTACT TTTCACCAGTTCAAGTCAGCACGGAATATGCAGATGTGTTAGCAATGGCAGAGAGTAATGAAAATACTCGGAATCGTCTT GGTGTAGATAAAAACTCCGATTGTTCTTTGACCTGCTTTTCATTGTTATGCAACATTATGAAACGTTTTGAAATGATGAT AAATCCTCCTCCGCCTAGAGTGTTCATCAGTTTCGGCGAGAAGCAGCTCGAAATGAACCTAGTAAGTTCTCTGAAAACAG AATTTGAATCAAACGAAATCTCGGTATATATAGAAGATGAGACAAAGGAGAGGATCAAAGAGTCAAAGGTTGCAATAGTT GTCTTCTCAGACAAGTACCCTGAGTCACCAGAGTGTCTTGATGAGCTCGTTGAGATCAAGAAGCTTATGGACGTAGGAGA GATCACTCCCTTCCCTATTTTCTACAAGCTAAAGGATGTTCCTAGGCTAGCTCAATCAGTTAAACAACTGAAGGGTTGTT TCCGTAATAGGCTTCTCAAGATAGAACAAGAAGTGCGCAAAACCGTCAATAGGGACAATGTGAACTCTATACTAGATACC GAAGCTAGAATCTGGGAATGGAGACAAGCTATCTCGTCCATTTCCTCAAGACCAGGCTTGAGCAATGAAAATAGCTCTGA TCCAGTGTTCTTCACTGATGTCGTGACCAAGGTCAAAAAACTGTTTGAATTTAAGGCTATACCGAAGAAGTCAAGTTCCT ATATAATTACTAATCAAGTGATTGAAGAAAAGCCTATAATGCATCGACAGAAGACAGCACCAGCAATACCAACAGTCAAA TCCGTAGATGATGACTTATTCTACTCCCTACCTTCGTTCTTACAAGCTCTAGACCTTGAAATTACTGACTTTGAGGGCTT CACCGAGATGCACAGTGGTCTCATATCTCTGAGCCTAAAAAGACACAGTAATCTAGTATGTCTGAACTTGGGTTCTCTTG AAAAGCTCGTCCATTTTCGGTGTTCTGACTCATTCGAATTCCTTAGTCAGGGTTTTGGTCTGAATCATCCCGGTATCAGC AGATTTGAAGAGCCTTCCCGGGTCCTTGAAATAGAATCATCTCAACCCCAACAACGGTTTGATAACGTCTTATCGTCTCA TCTCAAAATCACCAATATCACATAA |
| AA seq | Len:675 aa MKISSSLKRSWSSPDLRPRSLRRTIPQFSRSPGLMLFPKDGGFVLYDPKEGNIQRNVGDFSGCRFLANSGNWLLVLDSRS DLYMVDAFSEKKKIPLPSLDSIKSADCIVKRVGDREFIRDESGAIYKDLSADVSQTGCFGNTLLKTENKVRRKVDRGSYK SILETEARIWGWRQALVYIEKSLMHPQEALTSLLQALNIKKSDLEDLITRPFIQTRGTDHLVFLDLISLKNPILGQRLIK RVQDGMIFLVLLGSVDGSVEDVDFKPRLLSRKPRLFPGNKLIVSPQEIQEQSYFSPVQVSTEYADVLAMAESNENTRNRL GVDKNSDCSLTCFSLLCNIMKRFEMMINPPPPRVFISFGEKQLEMNLVSSLKTEFESNEISVYIEDETKERIKESKVAIV VFSDKYPESPECLDELVEIKKLMDVGEITPFPIFYKLKDVPRLAQSVKQLKGCFRNRLLKIEQEVRKTVNRDNVNSILDT EARIWEWRQAISSISSRPGLSNENSSDPVFFTDVVTKVKKLFEFKAIPKKSSSYIITNQVIEEKPIMHRQKTAPAIPTVK SVDDDLFYSLPSFLQALDLEITDFEGFTEMHSGLISLSLKRHSNLVCLNLGSLEKLVHFRCSDSFEFLSQGFGLNHPGIS RFEEPSRVLEIESSQPQQRFDNVLSSHLKITNIT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | hypothetical protein; K04646 clathrin heavy chain (A) |