Names & Information
Knowledge of BnaC01G0196400GG:
| Gene Name | BnaC01G0196400GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC01g19360D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein At4g27190 OS=Arabidopsis thaliana GN=At4g27190 PE=2 SV=1 |
| NT seq | Len:2535 nt ATGGAGTGTTTGTCCCCGTTCTTGGGGGAGATTTTGCGTCCCATGTGTGACTCAATGTGCTCCCGGGTCGTTAATGCCAT AAGGTTCAAATCCAACGTCCAAGCTCTTAACAGTGTGATGGAGAGATTAGTTGAGCTTAAGGGCAACATAAATGAAGACC ACAAAGATAAACCATTTAGACTCAAGATAATGGGGTGGCAAAGAAATGCTGAGGAGGTTATCACTAAAGCAAGGTCGAAA CTTGAGGAACGGGTTTCGTGTGGTAAGTCCTTGAAATCCAGGCTGAGCAGGAAACTCGTTACGATTCTCAACGAAGCTAG AATGCTCGAAAAGGAAGGTTTAGATCTTTTAGACATGATAGCTGCGGCTACTGCACATGAAAGAGTTGAACATGTTCCGG GAGTTTCAGTACTTCATCAAACAACGGCTTCAAATATGTTGGGTAAAATTATAGATGGTTTGAGGAGCAGTGAGGTTCAG AAGATTGGTATTTGGGGTATGGGTGGAGTAGGGAAAACGACATTGGTGAGGACGTTGAACAATAAGCTTCATGAAGAGAC TGCAACTCAACCATTTGGCTTGGTGATCTTTGCTACACCATCCAAAGACTTTGATCCAAGAACGGTCCAAAAGCAGATTG CTGAGAGACTGGATATCGACACCAGGTTGGGAGAAACTGTAGAGAGGCTGGCAAGAAGGATCTATGTGAGGCTTGAGAAA GAGAACAACTTCCTTCTTATTCTTGATGACGTGTGGAAAGATATTGATTTAGATCTTCTGGGCATTCCACGAACAGAAGA GAAGAAGGGTTCAAAGATCATTCTCACTTCCAGGTTTCTTGAAGTCTGTCGTAGTATGAGGACAGATCTTGATGTTAGGG TGGATTGCTTGTGCGAAGAAGAAGCTTGGGAACTGTTTTGCCAGAATGCAGGAGAGGTAGCGAGATCAGATCTTATTGAG CCCATTGCAAAAGCCTTTTCACTTGAATGTGGCGGGTTGCCCCTGGCTATCATAACAGTCGGGACAGCTATGAGAGGAAA GCCAAATGTCATGTTGTGGGAACACGCCTTGAATCAGCTAAGTAGATCGGTACCTTGGATCAAAAGCATTGAAGAGAAGA TCTACCAGCCTTTGAAACTGAGCTACGACTTCTTGGAAGGACAAGCAAAATCTTGTTTTCTTCTTTGTGCTTTATTTCCT GAAGACTACTCCATTGAGGTTACGGAGCTTGTGATGTATTGGATAGCTGAAGGATTCATGGAGGAACAAGGTTTGCAAGA GATTAGACAAGACAAATTTTCTCCTTCTCTTCGATGGGTTTCTTTGATGAACAATAAGCCCGAGAGGCTCCCTCGTCTAC CAGAAGAGTACTGCATGGAAGCCTCAACCTTACTGCTACAGGAGAACTATCTTCTACAAGAAGCATCAGATGGGTTCTTG CAAGCATTCCCAGCTCTTAGGATTTTGAATCTAAAAACTCTTTCTAAACTTGAGCTACTGGATCTACATGGCTCCCGTAT CAAAGAATTCCCAAAAGGGCTAGAAAAGCTGGAGAGCTTTAAACACCTTGATCTTTCAGGAACAGTTCACCTCAAAACTA TTCCAGCTAGAATTGTTTCGCGGTTATCAAGTTTGGAGACACTAAACATGAAATTAAGTAACTACCATTGGAGTGTAAAA GGAGAAGAACAAGAAGGCCAAGCAACAGTTGAAGAGATTGCATACCTTGACTGTTTACAGAGGACACTAGCAATAAGTGG TCTCAACTTATCACAAGTATCCATGGAGTGGCTCTTGGCTTGTACAACCTCTGTAATACTGAACAGTTGTCAAGGGCTCC AAGGAATGATGAAGAAATTGGTCACTGGCAGCAAGACATTCGTGAATCTGAAATCTCTAACGATTGTGAAAACTAGTATC AACTCTAGTGGTGGTGGGATTGAGAAGGCAACCAGCAAAGGATCCTCCACAAGTCCAGACACACTTCCATTTCTGGAGGA ACTTGGTCTGCACGAAGTTAACTTTGTATCCCTTTCGGAATTACAAGCACAGCTATGGTTGAGATTGGTAGCTCTTAAAC TACTTCTGGTCAGCAAGTGCAATAACCTTAAAACACTCGTTGAGATAGACATGTTCACTATGCCAAACCTGGAGGAGATA GAAATTAGCGACTGTAACTCCTTGCATAATCTACGCCAAACTATTGATGGTCCACAAGAACCTCTCCTACCAAAGTTACG TGTCATGAAACTGAGAAATCTTCCAGAGCTGGAGAGTGTTTGCTACGAAAAAGAGACTTGGGAGTGTCTCGAACAGGTGA AAGTCATGAACTGTGGTCGGCTATATACTTTGCCCATAAGCTCCAAAACTTGTGGAAGAATCAAGGAAATAAAAGGAACT ATAAGTTGGTGGAAACATTTGAGATGGGATGATCCTTCTACTTTAGAAACTCTTGATCCTTGTTTCAAGCCATTAAGATT ACTTGGTGAAGAAATGGCACCCATATTTGGGGAGCACTACTTGTGGGACAGTTGA |
| AA seq | Len:845 aa MECLSPFLGEILRPMCDSMCSRVVNAIRFKSNVQALNSVMERLVELKGNINEDHKDKPFRLKIMGWQRNAEEVITKARSK LEERVSCGKSLKSRLSRKLVTILNEARMLEKEGLDLLDMIAAATAHERVEHVPGVSVLHQTTASNMLGKIIDGLRSSEVQ KIGIWGMGGVGKTTLVRTLNNKLHEETATQPFGLVIFATPSKDFDPRTVQKQIAERLDIDTRLGETVERLARRIYVRLEK ENNFLLILDDVWKDIDLDLLGIPRTEEKKGSKIILTSRFLEVCRSMRTDLDVRVDCLCEEEAWELFCQNAGEVARSDLIE PIAKAFSLECGGLPLAIITVGTAMRGKPNVMLWEHALNQLSRSVPWIKSIEEKIYQPLKLSYDFLEGQAKSCFLLCALFP EDYSIEVTELVMYWIAEGFMEEQGLQEIRQDKFSPSLRWVSLMNNKPERLPRLPEEYCMEASTLLLQENYLLQEASDGFL QAFPALRILNLKTLSKLELLDLHGSRIKEFPKGLEKLESFKHLDLSGTVHLKTIPARIVSRLSSLETLNMKLSNYHWSVK GEEQEGQATVEEIAYLDCLQRTLAISGLNLSQVSMEWLLACTTSVILNSCQGLQGMMKKLVTGSKTFVNLKSLTIVKTSI NSSGGGIEKATSKGSSTSPDTLPFLEELGLHEVNFVSLSELQAQLWLRLVALKLLLVSKCNNLKTLVEIDMFTMPNLEEI EISDCNSLHNLRQTIDGPQEPLLPKLRVMKLRNLPELESVCYEKETWECLEQVKVMNCGRLYTLPISSKTCGRIKEIKGT ISWWKHLRWDDPSTLETLDPCFKPLRLLGEEMAPIFGEHYLWDS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | NB-ARC domain |
| KEGG | disease resistance protein At4g27190-like; K13459 disease resistance protein RPS2 (A) |