Names & Information
Knowledge of BnaC01G0230900GG:
| Gene Name | BnaC01G0230900GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC01g31430D [Brassica napus] |
| Best Hit (SwissProt) | Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3 |
| NT seq | Len:3270 nt ATGACTGAACATATAGCTAATGATGTGTTCAATAAACTTATGAAACCATCAGATGATTTTAGTGACTTTGTGGGGATTAA AATGGTAGGGATTGTGGGGCCTTCAGGGATAGGTAAGAGTACCATAGGAAGAGCTCTTTTTAGTCAACTCTCTAGCCTAT TCCACCACCATGCTTTTGTCTCTTACAAGAGTATAAAACAGTGGGATGACTATAGCATGAAGTTGTATTTGGATGAACGA CTTCTGTCGGAAATTTCATGTCAAAAGGGCATAAAGATATCCCACTTAGGTGTAGCAAAACAAATTCTAAACCGAAAGAA AGTTCTTATCATCGTTGATGATATGGATGATCTTGAAGTAATAAATACATTGGTGGGGCAAACTAGATTGGTTGGATCGG GTAGCAGAATTATTGTTATAACTCAAGATAGGAAACTTCTTAAGTCTCAAAAGATTGAGCTTATTTATGAGGTGGATTTC CCATCGTACAATCTTGCTATGCAGATGTTCTGTCGATCTGCGTTTGGGGAAAACTATCCGCCTTACGGTTTTTCTGAACT TGCAGTTGAAGTTGCCAATCTTTCAGGTTATCTTCCTTTAGGTCTAAATGTCTTGGGTTCGTCTTTGAAAGGGATGACGA AGGAGGAGTGGGTGGATATGTTACCTAGACTCCGAAATAGTTTGGACGGGAAAATCGAGAAAACACTAAGAGTTAGCTAT GATGGGTTAGATAGCAAAGATCAAGAGTTGTTTCTTTATATTGCATGCTTATTCAGTGGTCACGAAGTCAATCACATAAA ATACTTGCTTGGAGACAGTGTCAGAATTGGGCTTAGAGTACTGGCTGACAAGTCCCTCATACATATAACACCATCAGACA AGATTGAAATGCATAGTTTGTTACAGAAGTTAGGTACAGAAATTGATCGTGCAGAGTCCATCAACAACCCTGGAAAACGT CGGTTCTTGAGGGAAGCTGAGGATATATGTGATGTACTTACCGATAATATTGGTACAGAGAGTGTTCTAGCCATGTATTT GAACATGTCAGAAATCAGCGAGCCTTTGTTTATAGATGAAAATGCATTTCGAGGAATGCGTAATCTCAAATTTCTAAATT TTTACAAAAACGGGTGGTTAAGAGGGACTGGTAAAGGTAAACTGTATTTACCTCGAGGCATTGTTCATTTTCCTCGTAAA CTCAGATTGCTACATTGGGATGAATATCCATCCAAGTGTATGCCTTTTTGTTTTAAGGCGGAGGGCCTCGTTGAACTCAG AATGATGAATAGTCAGCTTGAGAAGCTGTGGGAAGGAACTCAGCTTCTTGGAAGCCTCAAGAAGATGAATATGAGTTGTT CTGCAGATTTGAAAGAGATTCCAGATCTTTCAAAAGCCATAAATCTCGAGGAATTAAATCTTGAGGAATGCACATCTTTG GTGACACTTCCTTCCTCAATTCGGAATCTCAATAAACTGTGGGTGTTAAACATGTGGGGATGCTCAGGGCTTAAGATTCT GCCAGCTGATGTCAACTTGAAATATCTTACAATCCTCAATCTCGGAAGATGCTCACAGTTGAGTACGTTTCCTCGGATAA CAAGGAAAATTTCAGAGCTTTACCTAAATGAAACTGCACTAAAAGGAGATGAAGATAGTTCATGGATTGAGAACATCTGT CAACTTAGGATACTCAACTGGGATGGTGCTCCATTGAGTTGTATGCCTCCTCACTTCGACCCAGAATATCTCCATAGCTT TGAAATGAGAGGCGGCAGACTTCAGAAGTTATGGGAAAGAATCAAGTCGCTTCAAAGTCTCTGGATGATGGATTTGTCAG GATGTGAAAGCCTGGTTGAAATTCCAGATCTTTCAATGGCCACCCAACTTGAGTTTTTGAAACTCAAAAATTGCAAAAGT TTGGTGATGCTTCCTTCTTCATTTAGGAATCTCAACAGACTGGTGAGCTTGAACATGGACGGATGTACAATGCTTGAGGT CCTACCAACCGACGTCAACTTGAGAAATCTTCAAGAGCTCGATCTCAGTGGATGCTCAAAGTTGAGAAATTTTCCGCAGA TTTCAACCAACATTGAATATCTCTATCTAGATGACACCGGGATTGAAGAAATTCCTTCCTGGATTGAGAAGATGTCACAT CTCAGAAAACTAAGGATGTCTCGATGCAAGAAGTTAAAAAACGTCTCCCTAAATATTTTTAAACTGAAATATCTCGAGGC AGATTTTTCAGACTGTGGAGGAATCACAACAATGTGTGATCAGTTACCAGGGCCCCACAAGGCTTCCGTTGCTGCTAGAA TCGGCATTAAATCTTATCTTCTAGGTCTGACTCCTCTCGGGTTCTATAATTGCTTCAATCTGGATAGAGATGCACAGGAA CTCATAATACAGTCACACTCAAACGGTGCCGTTATACCAGGCGGAGAAGTGCCTATGTATTTCACACATCGAGCTTGTGG TCGGTCCCTAAGTATCCTTTTGTCTGAGAGCTCTCTTTCTCAAGAATATATGATAGTTAAAACTTGCATCGTGGTTGGAC CTTCAAGTCACCCCAACGGAGACTTTGGAGTTCGTTGGTGCTTTCGAGGCGAAAAAGGTGTGATTCGTTTTGGAATTAAA GTGGCGTCGTACGAGATGGATCATCTGGTTTTGATTGGCTTTGATTTACGAATAAAAGAAGTGGATAACCCGGCATCTGA ATTGAACAACAACAACGTTCTACTGCTTGAGTTTTACAACGCCAATTATGATGAATATTTTGGGGAGTGTTCCTGCAGCA GCTTTAGCCACACAGAAAATTGTACCCTGGTAAGGATAAAAGGATGCGGTGCACGAATCATTCATATCTCAGAAATAGAC TACCAAGACAGTGACGAAAAAAGTGCTGAAGAGAATGATGAAGAAAGTGATGAAGAGAGTAATAGAAGCAAGAAGAAGAT GCGGATGACAGTTCCAACATCTCAAGAACATTCCAACTCTCTTTATATCCAAACTGTTGTGAATTCCAGACTACTGGCTC AGAATTTGGAGCTTTCCTTGGGGCTGGCTGGAGCATATGGTGAGGTATCTTCTGGAAGCAAAGTGTCCTCGCCTTCAAGG AACTTCCATGATGATGGAGCAGCTTCTTTTGACCCGTGTCTTCGCAGAGAATCTTTGCATTTTGAACCGATGATAATCGA GCAACAAGACAGAGGTCTATCCAACGAGGATCCTTCATTTTCTCCACAGCTTATAGACTTTTTTACTTAG |
| AA seq | Len:1090 aa MTEHIANDVFNKLMKPSDDFSDFVGIKMVGIVGPSGIGKSTIGRALFSQLSSLFHHHAFVSYKSIKQWDDYSMKLYLDER LLSEISCQKGIKISHLGVAKQILNRKKVLIIVDDMDDLEVINTLVGQTRLVGSGSRIIVITQDRKLLKSQKIELIYEVDF PSYNLAMQMFCRSAFGENYPPYGFSELAVEVANLSGYLPLGLNVLGSSLKGMTKEEWVDMLPRLRNSLDGKIEKTLRVSY DGLDSKDQELFLYIACLFSGHEVNHIKYLLGDSVRIGLRVLADKSLIHITPSDKIEMHSLLQKLGTEIDRAESINNPGKR RFLREAEDICDVLTDNIGTESVLAMYLNMSEISEPLFIDENAFRGMRNLKFLNFYKNGWLRGTGKGKLYLPRGIVHFPRK LRLLHWDEYPSKCMPFCFKAEGLVELRMMNSQLEKLWEGTQLLGSLKKMNMSCSADLKEIPDLSKAINLEELNLEECTSL VTLPSSIRNLNKLWVLNMWGCSGLKILPADVNLKYLTILNLGRCSQLSTFPRITRKISELYLNETALKGDEDSSWIENIC QLRILNWDGAPLSCMPPHFDPEYLHSFEMRGGRLQKLWERIKSLQSLWMMDLSGCESLVEIPDLSMATQLEFLKLKNCKS LVMLPSSFRNLNRLVSLNMDGCTMLEVLPTDVNLRNLQELDLSGCSKLRNFPQISTNIEYLYLDDTGIEEIPSWIEKMSH LRKLRMSRCKKLKNVSLNIFKLKYLEADFSDCGGITTMCDQLPGPHKASVAARIGIKSYLLGLTPLGFYNCFNLDRDAQE LIIQSHSNGAVIPGGEVPMYFTHRACGRSLSILLSESSLSQEYMIVKTCIVVGPSSHPNGDFGVRWCFRGEKGVIRFGIK VASYEMDHLVLIGFDLRIKEVDNPASELNNNNVLLLEFYNANYDEYFGECSCSSFSHTENCTLVRIKGCGARIIHISEID YQDSDEKSAEENDEESDEESNRSKKKMRMTVPTSQEHSNSLYIQTVVNSRLLAQNLELSLGLAGAYGEVSSGSKVSSPSR NFHDDGAASFDPCLRRESLHFEPMIIEQQDRGLSNEDPSFSPQLIDFFT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |