Names & Information
Knowledge of BnaC01G0250500NO:
| Gene Name | BnaC01G0250500NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaCnng14160D [Brassica napus] |
| Best Hit (SwissProt) | Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3 |
| NT seq | Len:2844 nt ATGGATTCTTATGTTTCCCTTACCACCGTTGTTGCTGCTGCAATATGCTTCTTGGCGCTTTTCGGTACAATTTTTTTCAA CAGAAAATCAAGATCCCATCAAGAAAACAAAACAATGGCTTCTTCTTTAACTCTTTTGGATCCTACGTATTCTTTTCCAC ACAGCTGGAAACACCATGTCTTCCCAAGCTTCCACGGAGAGGATGTCCGAAAAAACTTTCTCAGCCACATCCTCAAGGAG TTCAGGAGCAAAGGAATCGATCTATTCATTGACAATGATATAGAGAGAAAGAGAAGTTGGGGGCAAACAGTGATTTCTCT TTTCTATGAAGTGGATCCAACTGATGTAAAGAAGCAGACCGGTAAGTTTGGGAAGGTCTTTAAAAAAAATTGTAAAGGTA AAACAAAGGGCGACATCAAAATATGGAAACAGGCTTTGGTGGAAGTTGCCAAAATCGCCCGTTACCGTTCAAGAAACTGG TTCACTGACGCAGAGATGATTAAAGATATTGCCACTGATGTTTCATACAAGTTGAACCATTCGGCACCATCCAGTGATTT TGACGGCTTAGTTGGGATAGAATCTCAGATGACAAAAATAGGATCATTGTTACAGCTAGATTCGGATGAAGTGAGAAAAA TAGGGATTTTGGGTCCGCCTGGGATTGGTAAGACCTCCATTGCTAGATCTCTATACAATCAACATTCCCAAGATTTCCAA CTGAATGTCTTTATAGATAATATCAAAAGAAAGTATGTGATACCAACTTGTTCTGATGACTACAGTGTGAAGTTGTATTT ACAGAAGCAGTTTATGTCTCTACTAACCAATGAGACAGATATCAAGATTCCACATTTGGGAATCGTCAAAGACAGGTTGA AAGACAGAAAAGTTGTTGTCGTCCTTGATGATGTGGATCGGTCAGTACAAGTGGAAGCCATGGCGAACAAAACTTGTTGG TTTGGTCATGGGAGTCGAATTATCGTCACAACACAAGACCGAAGGGTTTTAAAAGCAAGTGGAATCAACCATATACACAA GGATGGTTTCAAGGAGCTTGCTTGTGAAAATGTGAGTCTTGTAGCCTGCTTTTTCAATGGTGAACAAGCTGATATAGTGG AAGGCTGTCTAGCAAAATGTTTTTTGGATGTGACACAAGGGCTTCGCGTCTTAGCTGAAAAATCTCTCATATCTATGGAA TCGAGAGCAATACAAATGGCTGAGTTGCTAGTCCAATTGGGAAGAAAAATTGTACTAAAACAATCTGTTAGTGACCTTGG TAAACGCCAGTTTTTGAATGGTGCAGTTGATATCGGTGAAGTACTTAGTGATGATAAAGCCGATTGTAGCAGTGTCATAG GAATCGATCTTAAAGAGGAGGAGGACATATCATGTACAAGTGAAAGATCCTTTGAAAGATTGACTAATCTTCAATTCTTA AGAATCAGTGGCAATGGCATCAACACACAAAGTCTGAACTACATATCCCAAAAACTTAGAGTACTCGTGTGGTCGGAGTT CCAGATGCCAACTTTTCCTTCTAGTTTTAATCCAAAGTTCCTAGTCAAACTAGAGATGCAGTTTAGCGATCTTGAGAAAT TGTGGGATGAAATTCGACCGTTCAACAATCTGAAGTGGATGGATTTAAGTGATTCAGACAGTTTGGAAGAGCTTCCTGAT CTCTCGACTGCCACCAATCTCCAAGAATTGGATCTCAAATTGGATCTTGGTGATTGCTCAAGTTTGGCGGAGATCCCTTC TTCTATTGGAAATGCAGTTAATCTGAAAACATTTTTAATTTTTAATTGCTCAAGTCTACTGGAGATTCCTTCAACTATTG CGACCATCACTAATCTCAAATCTCTTCGTCTCAGTGGATGCTCAAGTTTGTTGGAGCTTCCCTTCAACATTGAAACAGTC ACTAATCCCATGTGCATTGATCTCAGGTGTTGCTCAAGCCTAATGAAACTCCCTTCTTCTATAGGGAATGCAATTTATCT TCAAAAACTGGATCTCAGTCATTGCTCAAGTCTGGTGAAACTTCCTTCCTCTATTGGGAATATACTTAGTCTCGAAGAAC TGAAACTCAGTTATTGCTCAAGTCTAGTGGAGCTCCCTTCTTCTATGAAAAACCTTGGTAGATTGTCGAATTTGAAATTA GAGAAATGCTTGAAGTTAGAGATTCTTCTGGCCAACATCAACTTGGAATCTCTCGGATATCTCAATCTCTCAGACTGTTC TTTGTTGAAAAGTTATCCTAAGATTTCTACAGACATTCAAGAGCTTGATCCATGGACCGGGAGAATATCTAGTCTACAAC GACTTGTACTAAGCGGAATGAAGAAGCTGTTGAATCAAAAGCCTCTTGGTATATCAACCAAATTTAAGGCTTGCATCATA TGTGCTGATGGGAACGAAAATGGCATTGCTGATGGGGACGAAAATGGCATTACAGATTTGGTACAAACTGTATATTGTAG CATCACGTCAGAAGGGAATGCGCTCACTGCTTGCCATAAAAGAGCAGGACAAGTTGTGAAGGGGCATCTATACATATTCG AGGTTGAGGTTGAAACAGAGGAAATGACTTCCACGGAGCTTGTTTTTGAGTTCCTGGTCGGCTATTGGCATATTTACGAA GAGAGAATAAATTCAAAAACATGGGAGATAAAAGAATGTGGGGTACTCCAGCTCCAGGAGGTCCCTTTATTGAGCATCAG AGTAGTCAATGAAGATAATGAACCTTCATACACTGAGATCGGAGACAAACCTTGGAACCCAAGTAAGACAGAGAAGCGTC AAGAGAAAAAGAGCAAAATCACTGGAGCTTCTTCTGGAATATGA |
| AA seq | Len:948 aa MDSYVSLTTVVAAAICFLALFGTIFFNRKSRSHQENKTMASSLTLLDPTYSFPHSWKHHVFPSFHGEDVRKNFLSHILKE FRSKGIDLFIDNDIERKRSWGQTVISLFYEVDPTDVKKQTGKFGKVFKKNCKGKTKGDIKIWKQALVEVAKIARYRSRNW FTDAEMIKDIATDVSYKLNHSAPSSDFDGLVGIESQMTKIGSLLQLDSDEVRKIGILGPPGIGKTSIARSLYNQHSQDFQ LNVFIDNIKRKYVIPTCSDDYSVKLYLQKQFMSLLTNETDIKIPHLGIVKDRLKDRKVVVVLDDVDRSVQVEAMANKTCW FGHGSRIIVTTQDRRVLKASGINHIHKDGFKELACENVSLVACFFNGEQADIVEGCLAKCFLDVTQGLRVLAEKSLISME SRAIQMAELLVQLGRKIVLKQSVSDLGKRQFLNGAVDIGEVLSDDKADCSSVIGIDLKEEEDISCTSERSFERLTNLQFL RISGNGINTQSLNYISQKLRVLVWSEFQMPTFPSSFNPKFLVKLEMQFSDLEKLWDEIRPFNNLKWMDLSDSDSLEELPD LSTATNLQELDLKLDLGDCSSLAEIPSSIGNAVNLKTFLIFNCSSLLEIPSTIATITNLKSLRLSGCSSLLELPFNIETV TNPMCIDLRCCSSLMKLPSSIGNAIYLQKLDLSHCSSLVKLPSSIGNILSLEELKLSYCSSLVELPSSMKNLGRLSNLKL EKCLKLEILLANINLESLGYLNLSDCSLLKSYPKISTDIQELDPWTGRISSLQRLVLSGMKKLLNQKPLGISTKFKACII CADGNENGIADGDENGITDLVQTVYCSITSEGNALTACHKRAGQVVKGHLYIFEVEVETEEMTSTELVFEFLVGYWHIYE ERINSKTWEIKECGVLQLQEVPLLSIRVVNEDNEPSYTEIGDKPWNPSKTEKRQEKKSKITGASSGI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |