Names & Information
Knowledge of BnaC01G0273500GG:
| Gene Name | BnaC01G0273500GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: LOW QUALITY PROTEIN: putative disease resistance RPP13-like protein 3 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance RPP13-like protein 3 OS=Arabidopsis thaliana GN=RPP13L3 PE=3 SV=1 |
| NT seq | Len:2268 nt ATGGTTGATGCGATCACTGGATTCATTGTCGGAAAGATGGGCGACTATCTCATCAAAGAAGCGTCGATGTTGATGACAGT CAAAGATGATCTTGAAGAGCTGAAGACGGAGTTGACTTGCATCCACTGTTATCTCAAGGATGTCGAAGCACGAGAGAGAG AAGATGAGGTCTCAAAAGAGTGGACTAAAATGGTTTTAGATATCGCTTATGATGTAGAAGATGTTTTGGACACTTATTTT CTAAAATTCAAAGAAAGATCACAGAGATCCCTCGAGAGAAGAATTCTCGATATCACTCGTAAGCGTGAGACTTACGGCAT AGGAAGATTCAAAGAGCTTGGAGGAGACATGGCAACAAGTTCGAGGCGATATATTATCTCGATATTTGGCATGGGAGGTC TCGGGAAGACTGCTCTTGCTAGGAAGCTCTACAACTTGGGGGATGTAAAGAGAAGATTTGAGTATCATCGCGCCTGGACC TATGTCTCTCAAGATTATAATACACGAGATATGCTTTTAAGAATCATAAGATCTCTAGGAGTTGCTTCTGGGGAAGAGCT TGAAAGGATCAAGATGTTTACAGAGGAGGAGGAGCTAGAAGCTTACCTTCATGATCTTCTAGACGGAAGAAGCAGGACGC GTGGGAGAGCCTTACCGTGCAATCATGGAGGAAGTAGAGTCATCATCACTACGTGCATCAAAGCTGTGGCTGAAGGCGTG GATGGGAGAGTCCATGTTCATAAGTTAAGGTTTTTGACGTTTGAAGAATGCTGGAAACCGTTTGATCTGAAAGCATTCAT GAATATGCAATGGGTCGTCGATGAGGATCTGCATAGAATTGGCAAAGAAATGGTTCAAAAATGCGATGGTTTACCTCTTG CTATAGTCGTTCTTGCTGGGCTATTGTCTAAGAAGAGGCCAAACGAGTGGCATGAGGTGTGTGCCAGTGTCTGGCGATTC CTAAAGGATGACTCTATTCACATATCCACTATATTTGATTTTAGTTTCAACGAGCTGCATCATGAGTTGAGACTCTGCTT TCTTTATCTTTGCGTCTTCCCTGAGGACTATGAGATTGATGTGGAGAAATTAATACACTTACTTGTCGCTGAAGGGTTTA TACAAGAGGATGGAGAAATGATGATGGAAGACGTGGCTCGGCATTACATGGAAGAGCTGATAGACAGAAGCTTAGTGGAA GCAGTGAGGAGAGCAAGAGGAAAAGTGGTGTTTTGTAGAATCCATGATCTTCTTAGAGACGTGGCTATCAAGAAAGCAAA AGAGATCAACTTTGTAAATGTTGTTTATAACGAGCATCATTCTTCAACTACTTGCAGAAGAGAAGTGGTTCACCATCTTA TGGACAACAACTACTTGTGTGACAGACGTGTGAACAAACGGATGCGGTCCTTCTTGTTCATTGGAGAGCAGAAGAGAATG CTGGGAAGTTATGTTAAGACCACAAACTTGAAACTGAAGCTACTTAGAGTGCTTAATCTCGGAGGGCTTCTGTTTGATTG TGAAGGATACATCCCCTTTATGAGTTTACCAGATGTGATATGCGAGTTAATACACTTGAGGTATCTTGGTGTAGCTGATA CTGGTCTTAGACATTTACCATCTTTGATCTCCAACTTGCAGTTTCTACAGACACTAGATGCATCAGGCAACCGGTTTGAG GGAATGACTGATCTACGTAAGCTCACGTCAGTAAGGCACCTCATGGGAAGATTACTAATAGGAGATGTGGTTAACCTTCA GACTTTAAGGTCTATCTGCTCCTATAGCTGGAGTAAACTACAACATAAGTCACTCAAAAACCTTCGAGACTTGGAGATAT ATGATTCCGGGTATGTAGAGCTGAGAAGAGTTCGTTTGGACTTAGAGTTACTTCTCTATACTGAAAAATCTTCGTGCCTT AACTCTGAGAGTACCGACCTTCAGAATATCATCGATTCATCAGAAGCAGTTGTGTTCTTTCCCAGTCTTGAGTCAGTAAC ATTTTCCGGAACAAATCTCGAGGAAGACCCAATGCCTGCTTTGCCCAGACTGGAAGATTGTGATTGCTCGGGAGTAAAGA TGAGCATCAGTGCACAAGGTTTTGCTCGGCTGAGGAAGCTTGCATTGTTCAGGGTAGGATTAGATGCATTGTGGATAGAA GAAGCAGCCATGCCTAGTTTGGTCCATCTGAATCTGATCAACAGATTACGACCAAGAATGAAGCTGATGATTCCGGATCG ATTCTTGGCACTTGTTCGAGGCTACTAG |
| AA seq | Len:756 aa MVDAITGFIVGKMGDYLIKEASMLMTVKDDLEELKTELTCIHCYLKDVEAREREDEVSKEWTKMVLDIAYDVEDVLDTYF LKFKERSQRSLERRILDITRKRETYGIGRFKELGGDMATSSRRYIISIFGMGGLGKTALARKLYNLGDVKRRFEYHRAWT YVSQDYNTRDMLLRIIRSLGVASGEELERIKMFTEEEELEAYLHDLLDGRSRTRGRALPCNHGGSRVIITTCIKAVAEGV DGRVHVHKLRFLTFEECWKPFDLKAFMNMQWVVDEDLHRIGKEMVQKCDGLPLAIVVLAGLLSKKRPNEWHEVCASVWRF LKDDSIHISTIFDFSFNELHHELRLCFLYLCVFPEDYEIDVEKLIHLLVAEGFIQEDGEMMMEDVARHYMEELIDRSLVE AVRRARGKVVFCRIHDLLRDVAIKKAKEINFVNVVYNEHHSSTTCRREVVHHLMDNNYLCDRRVNKRMRSFLFIGEQKRM LGSYVKTTNLKLKLLRVLNLGGLLFDCEGYIPFMSLPDVICELIHLRYLGVADTGLRHLPSLISNLQFLQTLDASGNRFE GMTDLRKLTSVRHLMGRLLIGDVVNLQTLRSICSYSWSKLQHKSLKNLRDLEIYDSGYVELRRVRLDLELLLYTEKSSCL NSESTDLQNIIDSSEAVVFFPSLESVTFSGTNLEEDPMPALPRLEDCDCSGVKMSISAQGFARLRKLALFRVGLDALWIE EAAMPSLVHLNLINRLRPRMKLMIPDRFLALVRGY* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | disease resistance protein RPP13-like; K13457 disease resistance protein RPM1 (A) |