Names & Information
Knowledge of BnaC01G0300300GG:
| Gene Name | BnaC01G0300300GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein At1g59620 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein At1g59620 OS=Arabidopsis thaliana GN=At1g59620 PE=2 SV=3 |
| NT seq | Len:2703 nt ATGGCGGACTCACTTTTATCATTTGGAGTCGAAAAGCTTTGGGACCTCCTTGTCAGAGAATCTGAGCGACTTCAAGGGGT TGATGATCAGATCAATGGACTAAAGAGTGATTTAAATATGTTGAAGTGCTTTTTGGAAGATGCAGAAGCTAAGAAACACA CAAGTGCAATGGTGAGAAACACTGTGAAAGAGATCAAAGAAATTGTTTATGACGCAGAAGATATAATCGAAATCTTTCTT CTGGAGGAAGGACTCGGAAAAACAAGTAGCATCAGGAAGAGTGTGAGAAGATTTCCTCGCGTTATGGTGAAACGCATGGG GCTTGCTTTCGATATGAAAGCCATAAGCAATAGAATATCTAAGGTGATCCGCGATATGCAGAGTCTTGGCGTGCAACAAG TCATTGTCAATGAAACGTATGCACAGGAGAGACAAAAGGAAATGCGCCAAACTTTTTCCAGTGATACCGAAGACCATCTT GTGGGTTTGGAGGAGAATGTTGAGCAATTAGTTGGCTATTTGGCGGAGGAAGATAGTAGCAGCCAAGTGGTTTCCATAAC CGGGATGGGCGGTATTGGTAAAACCACCCTCGCAAGACAAGTTTTTAATCATGAGATAGTAAAAAGCCATTTTCCAGGAC TCGCATGGGTATCTATCTCACAACAGTTTACAAGGAAGTATGTGTGGCAGACGATCTTGCGGAAACTTAGGCGAGAATAT AAGGTGTTAGAGATGACAGAAGATGAACTCCAAGAAGAACTTGTTCGGCTGTTGGGAATACAAAAGACTTTGATTGTCCT TGATGATATATGGAGAGAAGGAGACTGGGACATAATAAAACCAATATTTCCACGACACAAAGGTTGGAAGATACTTCTTA CTTCCCGCAACGAGGGTGTAGCATTACGAGCAGATCCAAAATGTTTCACTTTTAAGCCAAATTGTCTAACTCTCGATGAA TGTTGGTATATTTTTCGGAGGATAGCATTTCCTAGGAGCGACACGGCCCAACTTAAGGTTGATGAAATGGAAGAGATGGG TAAGCAAATGATCAAACACTGTGGAGGACTACCTTTGGCAGTGAAACTGTTAGGAGGTTTGCTAGCTTCCCAATACACAT TGCATCAATGGAAAAGGATATATGAGAATATAAGATCTCACATCATTGGAGGGACTAGTTACAATGGCGACAACAACAAT TTGGTTTATCATGTATTATCTTTGAGTTTCGAAGAGTTGCCTAGTTGTTTGAAGCATTGTTTCCTCTACTTGGCTCATTT TCCAGAAGATTGTCCAGTAGATGTTGAGAAACTGGCCTACTACTGGGCCGCGGAAAGAATGCTAAAACCGGAGTATTATG AAAGAACAAGTGTTCGAGATGTTGTTGATGGCTACATAGAAGAGTTGGTTAAAAGAAATATGGTTATCTCCGAAAGAGAT GGTAGGACTTTGAGATTTGAAAAGTGTCACTTGCATGACACGATGAGAGAAGTTTGTCTTCTTAAAGCCAAAGAAGAGAA CTTTCTACAAATTGTTCATGGCACCACCTCTGAATCTTCTTGTAAATCTCGCAGACTCGCTATACATCGGCTTGATAAAA CATTTAATGAAGAGATGGAGATAAACAATCCAAAACTTAGATCTCTCTTGGTTATCTTGAAGGACATGAGAACAGATTGG ATGGTACCAGGTTTGCGCTTTACCGGGCTAAAGTTGATGAGGGTTTTAGATCTCTCTAAAGCTCAGTTTGATGGAGGGGA GTTACCCTCAAGCATTGGAAATCTCATTCACTTGAGATACTTGAGTTTATATATGGCACATGTAACTCATCTACCTTCTT CTATGCGGAAACTGAAGTTGCTGATCTATTTAAACCTATGTGTTGATGCGAGATGTTCAATCTACATGCCCAATTTCTTG AAAAAGATGCGAGAATTGACAACCCTCTGGTTTCCGTTGAGGATACATGACAAGGTAAAGATGGAATTGGGCAATCTAGT CAATCTGGAGACGTTAGAGAATTTCTCAACAGAGCACGGGAGTGTGTGTGATATCCAGGGTATGACAAGGCTCAAAACCC TCTCTATCTCATTCAATGGCAAGGGGTGTACTATGGAAACCCTATCTTCATCTCTGAGTGAATTGAGACACTTGGAAAAT CTTAATATATATGATGCTTATAAGTTGTATGCTCCCACAGTTGATGAAGAAGGATTTTGTTTTGATTGCAAGAATCTCAA ACAGCTCAAGTTGAGTATATGTATGCCAAGGTTACCTGATGCCCAACGCTTCCCTTCTCACCTTAGAAGCATAACTTTAC GTGGTTGTTGCTTAGAGGAGGATCCAATCCTGATTCTAGAGAAGCTTCTTCACTTATATGATGTCAGTTTACTAAATATA TCTTTCTGTGGGAGGAAAATGGTTTGCTCGAGTGGTGGGTTTCCCCAACTGCATAAGCTTGAATTTGGTGGATTAGCTGA GTGGGAAGAGTGGATTGTAGAAGAAGGCTCCATGCCCTTTCTTCAAACTCTGACTATTCATAATTGTCGAAAGTTGATGG AGCTTCCTGATGGGCTGAGGTTTGTCACTTCCTTGGAAGAACTCGATATGAACACACATACACTAGAATTTTGGAAGAAA TTGTCCATAGGAGGAGAAGAATACTACAAAGTCCAACACATACCTCTTTTGAATATCGTCTAA |
| AA seq | Len:901 aa MADSLLSFGVEKLWDLLVRESERLQGVDDQINGLKSDLNMLKCFLEDAEAKKHTSAMVRNTVKEIKEIVYDAEDIIEIFL LEEGLGKTSSIRKSVRRFPRVMVKRMGLAFDMKAISNRISKVIRDMQSLGVQQVIVNETYAQERQKEMRQTFSSDTEDHL VGLEENVEQLVGYLAEEDSSSQVVSITGMGGIGKTTLARQVFNHEIVKSHFPGLAWVSISQQFTRKYVWQTILRKLRREY KVLEMTEDELQEELVRLLGIQKTLIVLDDIWREGDWDIIKPIFPRHKGWKILLTSRNEGVALRADPKCFTFKPNCLTLDE CWYIFRRIAFPRSDTAQLKVDEMEEMGKQMIKHCGGLPLAVKLLGGLLASQYTLHQWKRIYENIRSHIIGGTSYNGDNNN LVYHVLSLSFEELPSCLKHCFLYLAHFPEDCPVDVEKLAYYWAAERMLKPEYYERTSVRDVVDGYIEELVKRNMVISERD GRTLRFEKCHLHDTMREVCLLKAKEENFLQIVHGTTSESSCKSRRLAIHRLDKTFNEEMEINNPKLRSLLVILKDMRTDW MVPGLRFTGLKLMRVLDLSKAQFDGGELPSSIGNLIHLRYLSLYMAHVTHLPSSMRKLKLLIYLNLCVDARCSIYMPNFL KKMRELTTLWFPLRIHDKVKMELGNLVNLETLENFSTEHGSVCDIQGMTRLKTLSISFNGKGCTMETLSSSLSELRHLEN LNIYDAYKLYAPTVDEEGFCFDCKNLKQLKLSICMPRLPDAQRFPSHLRSITLRGCCLEEDPILILEKLLHLYDVSLLNI SFCGRKMVCSSGGFPQLHKLEFGGLAEWEEWIVEEGSMPFLQTLTIHNCRKLMELPDGLRFVTSLEELDMNTHTLEFWKK LSIGGEEYYKVQHIPLLNIV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | POPTRDRAFT_554585; disease resistance family protein; K13457 disease resistance protein RPM1 (A) |