Names & Information
Knowledge of BnaC01G0307000GG:
| Gene Name | BnaC01G0307000GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | hypothetical protein EUTSA_v10023255mg [Eutrema salsugineum] |
| Best Hit (SwissProt) | Putative disease resistance protein At1g63350 OS=Arabidopsis thaliana GN=At1g63350 PE=3 SV=1 |
| NT seq | Len:2598 nt ATGGAAGAGCTCAAGGCTAAGCGTGATGATTTATCAAGAAGGGTAACAAGAGAGGAGGATAGAGGTTTACAAAGGCTTTC TGAATTCCAGGTATGGCTTACTAGAGTTGAGACTTTTGAAAACGAAGCCAACAATCTTCTTAGTGCTAGAAATGGTCAAC TTCAAAGGCTTTGTCTTCTTGGTTTTTGCTCTAAGAGTTTAATATTGAGTTATCGTTATGGCAAAAGTGTTTCCATGAAT TTAAGGGAGGTTGAAAAACTGAATAGTAAAGTTTTCGAAGTGATCGTTGAGCAAGCTCACACATTTGAGGTGGAGGAAAG ACAGCTTCAGTCAACAATTGTTGGTCAGAAAGAAATGTTGGAGAACGCATGGAATCATCTCATGGAAGATCGAGTTGGTA TTATGGGTTTGTACGGTATGGGGGGAGTAGGGAAAACAACTCTTCTCACACAACTCAACAATAAGTTCAGTGGCATGACG TGTGGATTTGATTTTGTGATTTGGGTTGTGGTGTCTAAAGAGTTACGAGTAGAGAAGATTCAAAGTGAGATCGCTCGGAA GGTTGGTCTTGATGGAGATGAATGGAAACAAAAAGAGAAAAGCCAAAAAGCTGATGTTATATACAATTTCTTAAGGAAAA AGAGACTCCTGTTGTTTTTAGATGACATATGGGAGAAGGTGGATTTAGTTGAGATTGGAATCCCGTTTCCAACAACACAA AACCGATGCAAAGTGGCATTCACAACCCGTTCCAAGGCTATATGTGCGCACATGGGCGTTGAAGAACCAATGGAAGTCAA ATGCTTGTCGGAAGATGACGCATATGATTTGTTCCAAAAGAAGGTTGGACAAATAACATTAAGAAGTGATCCAGGGATCC CCGAACTTGCAAGAAAAGTTGCTAAGAAATGTTGTGGCCTACCGTTGGCACTTAATGTTGTAGGCGAGGCCATGTCATGC AAGAGGACGCTACAAGAATGGTGTTACACGATAGATGTCTTGACTTCATATGCCGTAGAGTTTTCTGGCATGAAAGATAA AATTCTTCCACTTTTGAAGTATAGCTATGATAATCTTGAGGTGGAGCAGGTCAAAACGTGTTTACTATATTGCACTTTAT TTCCCGAAGATGATAAAATTCCTAAAGAGAAATTGATAAGCTTATGGATATGCGAAGGGATAATAGACGGAAGTGGAGGT ATAGAAAGAGCTGAGAACAAGGGTTATGATATAATTGGTAGTCTTGTTCGTGCATCACTGTTAACGGATGTCAAATGGTA TGGAACAGAGAATGTATGTATGCATGATGTAGTTCGTGAGATGGCCTTATGGATTGCATCTGATTTAGGAGCACAAAAAG AGGCTTTCATTGTGCGTGCAGGTGCTGGGTTAAGTGAAATGCCAAAGGTTGAGAACTGTAATGTTGTAAGAAGGATGTCA CTGATAAAGAACAAGATTCACCATCTCCCTAGCAGTCAGGAATATCTCGAGCTCACAACATTGCTCCTAGAAAAAGCAAA TTTGACAAATATCTCGAGTGAATTCTTCAAGTCCATGCCAAGACTAGCTGTTTTGGATCTATCATATAATGGAAATCTGT TTGAACTGCCGGATGGAATATCACAACTAGTTTCCTTGCAATATCTCAACTTGTCATATACAAGTATACGTCATTTGCCT AGGGGTGTGCAAGAGTTGAAAAAGCTAATTCACTTGGATTTGGAGGAGACAGATAACCTTTCAAATATTGATGGGATATT ATCAAGTCTGCACAACTTGAAGATATTGAATTTATCTCGTGCTGGTTTTTCATTGGATTGCAACATACTGGAGGAGTTGC AAACCTTGGAACATTTAGAAATTTTAACCATAGAGATCGATCTTCAACAAGGTTTGGAACAATTTTTGAGCTCTCATAAG TTGACACCTGCAACAAGAAATCTAACGATCAGGTGTATGCAACTTGAATCATCTGGTATCTCACTTCCAATATCTATGGA GAATCTACGTGAATTCAACATTGTCTGGTGCAGTATCTCTGAGATAAAGATGGGAACGATATGCATGGAAAGCAAAACAG TTTCTCCTCTAGACAATCCGAGGACCTCATGCTTCTTGAGCCTCTCTAAAGTGATTATACTAGACTGCAAATGCGTGAAG GAGTTGACGTTACTGATGTTCGCTCCAAATCTTAGAGTTCTCTCCGTCCAATTTGCAAAACAATTAGAAGATGTGATAAA CAAAGAGAAAAGTCGTCACGGTGGTGAAAAATCAGGGATTGTTCCTTTTCGAAGGCTGGAATTTCTTTTGCTGGGTGATC TACCAGAGCTGAAGAATATCTACTGGAATCCCCTACCTTTTCCATGTCTAAAGAGAATCGATATAATCAGATGCCCGAAT CTGAAAAAGCTTCCACTGGATTCCCAAAGTGGCAAGCATGGTGGAAATGGAGTAATCATAAGATACACAGTGAAAGAATG GATTGAAACTGTGGAATGGATAGACGAAGCTACAAAAACCCGCTTCTTACGTTCATGCCTACACGTCTGTGAAACGCCGA ATCAAGACAATCAACCGCATTCTTCCGTACCAACCTAG |
| AA seq | Len:866 aa MEELKAKRDDLSRRVTREEDRGLQRLSEFQVWLTRVETFENEANNLLSARNGQLQRLCLLGFCSKSLILSYRYGKSVSMN LREVEKLNSKVFEVIVEQAHTFEVEERQLQSTIVGQKEMLENAWNHLMEDRVGIMGLYGMGGVGKTTLLTQLNNKFSGMT CGFDFVIWVVVSKELRVEKIQSEIARKVGLDGDEWKQKEKSQKADVIYNFLRKKRLLLFLDDIWEKVDLVEIGIPFPTTQ NRCKVAFTTRSKAICAHMGVEEPMEVKCLSEDDAYDLFQKKVGQITLRSDPGIPELARKVAKKCCGLPLALNVVGEAMSC KRTLQEWCYTIDVLTSYAVEFSGMKDKILPLLKYSYDNLEVEQVKTCLLYCTLFPEDDKIPKEKLISLWICEGIIDGSGG IERAENKGYDIIGSLVRASLLTDVKWYGTENVCMHDVVREMALWIASDLGAQKEAFIVRAGAGLSEMPKVENCNVVRRMS LIKNKIHHLPSSQEYLELTTLLLEKANLTNISSEFFKSMPRLAVLDLSYNGNLFELPDGISQLVSLQYLNLSYTSIRHLP RGVQELKKLIHLDLEETDNLSNIDGILSSLHNLKILNLSRAGFSLDCNILEELQTLEHLEILTIEIDLQQGLEQFLSSHK LTPATRNLTIRCMQLESSGISLPISMENLREFNIVWCSISEIKMGTICMESKTVSPLDNPRTSCFLSLSKVIILDCKCVK ELTLLMFAPNLRVLSVQFAKQLEDVINKEKSRHGGEKSGIVPFRRLEFLLLGDLPELKNIYWNPLPFPCLKRIDIIRCPN LKKLPLDSQSGKHGGNGVIIRYTVKEWIETVEWIDEATKTRFLRSCLHVCETPNQDNQPHSSVPT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | hypothetical protein; K13459 disease resistance protein RPS2 (A) |