Names & Information
Knowledge of BnaC01G0460100GG:
| Gene Name | BnaC01G0460100GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | disease resistance gene homolog 9N [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1 |
| NT seq | Len:2781 nt ATGGCTTCAGCTACTGTTGATGTTGGGATAGGACTGATTCTCAGCCTCCTAGAAAACGAGACCTTGTTGCTGTCAGGAGT TCACAGCGAGATCGAGAAGATGAAAAAGGAGTTGCTTATCATAAAGTCCTTTCTTGAGGACACACATAAACAAGATTGGA ATGGTTCCACCACCACAACAACGGGAACAACAACAACAACTCAACTCTTTCAAACTTTTGTGTCAAACATAAGAGACTTG GCTTACCAAGTGGAAGACATCATCGACGAATTCACCTATCACATCCACGGTTATCGCAACTGCACAAAGCTTCAGCGTGC GTTTCATTTCCCCAAGTACATGTGGGCTAGACACTCCATAGCTCAGAAGCTAGGAGCCGCGAATGTCATGATTCGTTCCA TTTCTGAATCCATGAAAAGGTACCAAACCTATCAAGGAGCATCAGTATCGCCTGTTGATGATGGTGGTGGTACAAAGTGG CTGAATAACATCAGCGAGTCATCGCTGTTCTTTAGTGAAAACAGTCTTGTAGGGATTGATGCAGCTAAAGGAAAGCTCAT TGGATGGCTTCTAAGTCCTGAACCTCAAAGGATAGTTGTCTCGGTGGTCGGAATGGGTGGTTCAGGGAAGACTACACTCT CAGCTAACATCTTCAAGTCCCAAACCGTGCGCAAGCATTTCGCGTCATACGCTTGGGTTACTATCTCTAAATCCTATGTG ATTGAAGATGTGTTTAGGACAATGATAAAAGAGTTCTACAAAGAAGCAGAAACGCAAATTCCAGGTGAGTTGTACTCCTT AACTTACAGAGAGCTGGTTGAGAAGCTTGTGGAGTATTTGCATTCCAAGAGGTACTTTGTTGTGCTTGATGATGTGTGGA ACACTAGTCTGTGGAGGGAGATAAGCATCGCTCTACCAGATGGCATTAGCGGAAGCCGTGTTGTGATAACTACTCGCAGC AATAACGTGGCTTCTTTCTCATATGGCAGTGGGAGTAGAAAGCATGAGATTGAGCTCTTGAACGAAGACGAAGCTTGGGT GCTTTTCTGCAACAAAGCGTTTTCTGGAAGCCTTGAGGAATGTAGGAGGAGGAATCTAGAGCTGATAGCAAGGAAGTTAC TTGAGAGATGTCAAGGCCTGCCGTTAGCTATAGCTTCTTTGGGGAGCATGATGTCAACAAAGAGGTTGGAGTCAGAGTGG AAGCAAGTCTACAACTCTTTGAACTGGGAACTTAACAACAATCTTGAGCTCAAGGTTGTTAGAAGCATCTTGTCGCTTAG CTTCAGTGATCTGCCGTATCCTCTTAAACGTTGTTTCTTGTACTGTTGTATGTTCCCTGTGAACTATCGGATGAAAAGGA AGAGGCTGGTTAGGATGTGGATGGCGCAACGGTTTGTGGAACCGATCAGAGGAGTGAAAGCGGAGGAAGTGGCTGATGGT TACTTAAATGAGCTTGTTTACAGAAACATGCTTCAAGTTATCTTGTGGAATCCTTTTGGACGTCCCAAAGTGTTCAAGAT GCATGATGTGATAAGGGAGATCGCTCTATCTATATCCAAAGCTGAGAGGTTCTGTGATGTTAATGGTGATGATGATGATG ATGATGCAGAAACAGCCGAGGATCACGGTACTCGCCATTTATGCATTCAGAAAGAGATGAGATCAGGTACTGTACGTAGA ACAAACCTTCACACTCTTTTGGTTTGCACTAAACACAGCATTGAACTGCCTCCAAGTCTGAAACTTCTAAGAGCCTTAGA CCTTGAAGGCTCCGGCATCAGCAAGCTACCTGAGTTTTTGGTAACTCTGTTCAATTTAAAGTACTTGAACTTGTCGAAAA CCGAAGTGAAGGAACTCCCAAGAGACTTTCATAGACTCATCAACTTGGAGACATTGAACACTAGGCACTCCAAGGTTGAT GAGCTTCCTCCAGGGATGTGGAAGCTTCGGAAGCTGCGTTATCTGATTACTTTCCGTTGCAACTATGGACATGATTCCAA CTGGAACTATGTTTTAGGCACAAAGGTTTCTCCGAGTATCTGCCAGCTGAAGGATTTGCAAGTCATGGACTGCTTCAACG CAGAAGCTGAGCTTATCAAAACGCTAGGGGGCATGACTCAGCTCACGAGAGTAAGTATTGTCATGATTAGAAGAGAACAT GGACGTGACTTATGCGAGTCGCTGAACAAGATCAAAAGACTCAGATTCTTATCCCTAACGTCTATTCATGAAGAGGAACC GTTAGAGATAGATAGACTGATAGCAACTGCAAGTATTGAGAAACTCTTTCTTGCAGGGAAACTAGAAAGAGTACCGAGTT GGTTCAGTACTCTTCAGAACGTTACCTATTTGGGTCTGCGCGGCTCTAAGCTGCAAGAAAACTCCATTCACTACCTCCAA ACGCTTCCTAAATTAGTATGGCTTTCATTTTACAATGCATACATGGGGACTAGGTTGTGTTTTGCTGAAGGGTTTGAGAA TCTGAAGATGCTAGATATAGTCCAGATGAAACATCTGAAAGAGGTTGTGATAGAAGATGGTGCAATGGTTGGGATACAGA AGCTTTACATCAGAGCTTGTAGAGTGTTGGAGTCGGTACCGAGGGGAATAAAGAATCTTGTGAACCTTCAAGAACTGCAT TTGAGTCATGTTTCTGATCAGCTAGTGGAGAGGATTCGTGGGGAAGAGGGTGTAGACAGGTCGAGGGTTAAACATATTCC TGCCATCAAGCATCATTTCAGAACTGAGGATGGCTCTTTCTATGTGAGCCTCTCATCTTGA |
| AA seq | Len:927 aa MASATVDVGIGLILSLLENETLLLSGVHSEIEKMKKELLIIKSFLEDTHKQDWNGSTTTTTGTTTTTQLFQTFVSNIRDL AYQVEDIIDEFTYHIHGYRNCTKLQRAFHFPKYMWARHSIAQKLGAANVMIRSISESMKRYQTYQGASVSPVDDGGGTKW LNNISESSLFFSENSLVGIDAAKGKLIGWLLSPEPQRIVVSVVGMGGSGKTTLSANIFKSQTVRKHFASYAWVTISKSYV IEDVFRTMIKEFYKEAETQIPGELYSLTYRELVEKLVEYLHSKRYFVVLDDVWNTSLWREISIALPDGISGSRVVITTRS NNVASFSYGSGSRKHEIELLNEDEAWVLFCNKAFSGSLEECRRRNLELIARKLLERCQGLPLAIASLGSMMSTKRLESEW KQVYNSLNWELNNNLELKVVRSILSLSFSDLPYPLKRCFLYCCMFPVNYRMKRKRLVRMWMAQRFVEPIRGVKAEEVADG YLNELVYRNMLQVILWNPFGRPKVFKMHDVIREIALSISKAERFCDVNGDDDDDDAETAEDHGTRHLCIQKEMRSGTVRR TNLHTLLVCTKHSIELPPSLKLLRALDLEGSGISKLPEFLVTLFNLKYLNLSKTEVKELPRDFHRLINLETLNTRHSKVD ELPPGMWKLRKLRYLITFRCNYGHDSNWNYVLGTKVSPSICQLKDLQVMDCFNAEAELIKTLGGMTQLTRVSIVMIRREH GRDLCESLNKIKRLRFLSLTSIHEEEPLEIDRLIATASIEKLFLAGKLERVPSWFSTLQNVTYLGLRGSKLQENSIHYLQ TLPKLVWLSFYNAYMGTRLCFAEGFENLKMLDIVQMKHLKEVVIEDGAMVGIQKLYIRACRVLESVPRGIKNLVNLQELH LSHVSDQLVERIRGEEGVDRSRVKHIPAIKHHFRTEDGSFYVSLSS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | RPM1; disease resistance protein RPM1-like; K13457 disease resistance protein RPM1 (A) |