Names & Information
Knowledge of BnaC01G0484800GG:
| Gene Name | BnaC01G0484800GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA01g33750D [Brassica napus] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
| NT seq | Len:2751 nt ATGGATCTTTACCTTCTCCTTGTGACAGTTTCTGCAACCATCTTTACGCTTTTGTGTAGTACAATCTTTTTTATTGTTTA TGGAAAGTTCAGAGTCCAAGAAAACAAAATAATTGCTTCATCATCTCCACCATCTCCCAAGTCGTCTTTGCCTCGTAACT GGACACCCGATGTCTTCCCGAGCTTCCACGGAGCAGATGTCCGTAAATCATTCCTCAGCCATTTTCTCAAGGAGTGTAGG AGCAAAGCAATCAGCCTGTTCATCGATAACGAGATCACAAGAGGAGAGTATATCGGACCTGAGCTCAAGAAGGCAATCCA AGGATCAAGAATTGCGATTGTGTTGCTCTCGAAAAGATACGCTTCTTCGTCTTGGTGTCTGGACGAGTTAGTGGAGATTA TGAAGTGTAAGGAAGAGTTAGGTCAAACGGTGATTCCCGTTTTCTATAAAGTGGATCCAACTGATGTCAAGAAGCAGGCC GGTGAGTTTGGGAAAGTCTTTAAAGAAACTTGTAAAGGTAAAAGAAATGAGGTTATTGTAAAATGGAGTCTAGCTCTAGC AAAAGTGGCCACACTCGCTGGTTACCATTCAAAGAACTGGGATAATGAGGCAAAAATGGTCGAAGATGTTGCCACTGAGG TTGCAAAAAAGTTGTTTAACTCCACACCGTCAAGAGATTTCGACGAATTCATTGGGATGGAAGCTCATATGAACAAGATT TCGCGGGTTTTACGCACAGATTTGGATGAAGTGAGGATGATAGGGATTTGGGGGCCGGCTGGGATTGGCAAGACCACCAT TGCTAGGTGTCTGTTTAATCAACTATCAGATACATTTCAATACAGTGTCTTTATGATGAATGTCAAAACAATGTATACTC CACCGGTTTGTTCAGACGACTACACTGTGAAGTTGCATTTGCAGCAAAAGCTTTTGTCTCAGTTAACCAACCAGAAGGAG GAGGATCTCAAGATTTCTCACTTGGGAAAGCCATGGCCAAAAAAACTGGGTGGTTTGATGTTTTGTATGTATGCTTTTGG TCAAAAGTCCCCTGAAGATGGTTTTGAGATGCTTGTATGGCAAGTTACAAGACTCGCCGGTAGACTCCCATTGGGACTAA GGGTTATGGGATCTTATTTTCGAGGAATGTCGAAGGAGGAGTGGGAAAACACACTACCAGGGCTAAGGATGTGCCTTGAT GGAGAAATTGAGAGCATTTTGATGTTCAGTTATAACGCACTATCTCATGAAAATAAAGATTTGTTTCTTCACATAGCCTG CTTTTTCAACTATGGGTGGATAGAGAAAGTGGTAGAGCATCTTTCAAAGAGATTTTCTGATGTGAGGCAACAGCTTAACG TCTTAGCTGAGAAATCTCTCATATTTTTGGAAATTGGACGTGTGAGTATGCATGATATGCTAGTCCAGCTGGGTGGAAAT ATTGTCCGCAAACAGCCCACTGAGCCTGGACAACGTCAGTTTCTGGTCGATAAAAGAGAGATTTGTGAAGTACTTGCTGA TGGTTCAGCGGGTAGTAGAAGTGTTATTGGCATAAAGTTTTATGGAAACAAAATAAATGTCAGTGAGAGAGCCTTTGAAG GAATGTCTAATCTCCAGTTCTTAAGAATCAGACAGGAACGTGATGGTGAAGGAGATACATTTCATCTATTTGGTGGACCA AGCTATTTATCTCGTCAACTTAGATTACTAGATTGGAAATATTTTCCGATGACATGTTTGCATTGTATTCCCAACCCAGA GCTCCTCGTGGAACTAATCATGTTTTGCAGCAAACTTGAGAAGTTGTGGGAAGGAACTAAACTGCTTAGCAATCTCAAAT GGGTGCGTTTGAGGGATTCAAAAAACTTGAAGGATGTTTCTAGTCTCTCAACTGCCACTAGTCTACAGGAATTAGATCTC ACAGGATGTTCAAGTTTAGAAGTCCCTTCCTCTATTGGAAATGCCACTAATCTCAAACATCTGAATTTTAGTAGATGCTC AAGTCTTGTGGAGCTTCCTGCCTCTATTGGAAACCTCCATAAACTAGAATCTTTAAATTTGAAAAAATGTTGCAAGCTGG AGGTTCTTCCTATTTCTCCTTGGATCAAGAGAATCTCTCGTCTTCGTCGACTTGTACTCAATGGATGCAAAGAGCTTTTG TCACTCCCGCAGCTTCCAATTTCATTATCAGAACTAGACGCAGAAGATTGCGAGTCTCTGGAGAGACTAGACTGCTCCTT TCTTAATCAAAAGATTGCTCTCAACTTCGCCAACTGCTTCAAACTGAATAAAGAAGCTAGAGACATCATCATCCAGACAT CGACTAGTTATAAAGGTACGGTCTTACCCGGTAAAGAAATGCCTAACTACTTCAATTATCAAGCTAATGGAGGTTCCCTA GTAATGAAGTTGAACGAGAGGCCTTCACCTTCATCTGTGAGATGGAGGGCTTGCATCTTGCTGGATTGTAAAGATGAGGT TGAAGCTGCTAAAGGTCAAATGTTGTTTGTGCGTCAATGGATCAAACAGAATAGCCTCGATGATGTCCCTTGCAGTCCAA TTATGCACATTCTGTATCGCCCTTTAAGGGAACATCTGTACATCTTTGAATTCGAAGCAAACGTGACTTCAAACAAACTT TTCTTTGAATTTGGAGTCATCAGAGACACATGGATGATCAAAGAATGTGGAGTGCATTACCTTAATACCGCATCAAATAA GAATCACTATGTGGTTATTATTGTTATATAA |
| AA seq | Len:917 aa MDLYLLLVTVSATIFTLLCSTIFFIVYGKFRVQENKIIASSSPPSPKSSLPRNWTPDVFPSFHGADVRKSFLSHFLKECR SKAISLFIDNEITRGEYIGPELKKAIQGSRIAIVLLSKRYASSSWCLDELVEIMKCKEELGQTVIPVFYKVDPTDVKKQA GEFGKVFKETCKGKRNEVIVKWSLALAKVATLAGYHSKNWDNEAKMVEDVATEVAKKLFNSTPSRDFDEFIGMEAHMNKI SRVLRTDLDEVRMIGIWGPAGIGKTTIARCLFNQLSDTFQYSVFMMNVKTMYTPPVCSDDYTVKLHLQQKLLSQLTNQKE EDLKISHLGKPWPKKLGGLMFCMYAFGQKSPEDGFEMLVWQVTRLAGRLPLGLRVMGSYFRGMSKEEWENTLPGLRMCLD GEIESILMFSYNALSHENKDLFLHIACFFNYGWIEKVVEHLSKRFSDVRQQLNVLAEKSLIFLEIGRVSMHDMLVQLGGN IVRKQPTEPGQRQFLVDKREICEVLADGSAGSRSVIGIKFYGNKINVSERAFEGMSNLQFLRIRQERDGEGDTFHLFGGP SYLSRQLRLLDWKYFPMTCLHCIPNPELLVELIMFCSKLEKLWEGTKLLSNLKWVRLRDSKNLKDVSSLSTATSLQELDL TGCSSLEVPSSIGNATNLKHLNFSRCSSLVELPASIGNLHKLESLNLKKCCKLEVLPISPWIKRISRLRRLVLNGCKELL SLPQLPISLSELDAEDCESLERLDCSFLNQKIALNFANCFKLNKEARDIIIQTSTSYKGTVLPGKEMPNYFNYQANGGSL VMKLNERPSPSSVRWRACILLDCKDEVEAAKGQMLFVRQWIKQNSLDDVPCSPIMHILYRPLREHLYIFEFEANVTSNKL FFEFGVIRDTWMIKECGVHYLNTASNKNHYVVIIVI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |