Names & Information
Knowledge of BnaC01G0485000GG:
| Gene Name | BnaC01G0485000GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA01g33780D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:2736 nt ATGGATCTTTACCTTCTCCTTGTGATAGTTGCTACGCTTTTGTGTAGTAGAATCTTTTCTTTTGTTTATGCCAAGTTCAG AGTTCAAGAAAACAAAATAATTGCTTCTTCTTCTTCATCTCCACCATCTCCCAAGTTGTCTTTGCCTAGTAATCGTGTAC ACGATGTCTTCCCTAGCTTCCACGGAAAAGATGTCCGTAAATCCTTTCTCAGTCATTTTCTGAAGGAGTGTGGGATCAAA GGAATCAACCTGTTCATTGATAACGAGATCACTAGAGGAGAGTTTATCGGACCTGAGCTCAAGAAGGCAATCCAAGGATC AAGAATTGCTATTGTGTTGCTCTCGAAAAGATACGCCTCTTCATCATGGTGTCTTGACGAGTTAGTAGAGATTATGAAGT GTAAGGAAGAGTTAGGTCAAACAGTGATGCCCGTTTTCTATGAAGTGGATCCAACTGATGTCAAGAAACAGGCCGGTGAC TTTGGGAAAGTCTTCAAAAAAACTTGTAAAGGTAAAACAAATGAGGTTACTAGGAAATGGAGTGAAGCTCTAGCAAAAGT GGCCACCCTCGCTGGTTACCATTCAAATAACTGGGATAATGAGGCAAAAATGATCGAAGATGTTGCCACTGATGTTGCAA AGAAGTTGTTTAACTCCACACCGTCAAGAGATTTCGACGAATTCATTGGGATGGAAGCTCATATGAACAAGATTTCGCGG GTTTTACGCACATATTTGGATGAAGTGAGGATGATAGGGATTTGGGGGCCGGCTGGGATTGGCAAGACCACCATTGCTAG GTGTATGTTCAATCAACTATCCCATACTTTTCAACATAGTGTCTTTCTGATGAATGTCAAAGCAATGTGTACGCCACCGG TTTGTTCAGACGACTACAACGTGAAGTTGCACTTGCAGCAAATTTTTCTGTCTCAATTAACCAACCAGAAAGAAGATTTC AAGATTTCTCATTTAGGAGTTGCACAAGAAAGACTGAATGACAAGAAAGTTCTTGTTGTTCTTGATAACGTTGATCGGTT AGTACAACTAGAAGCCATGGCCAAAAAAACTGGGTGGTTTGGTAATGGAAGTCGGATTATCATTACAACGCAAGATCGAA AGATTTTGAAGGCACATGGGATCACTCATATTTACAAGGTTGATTTTCCATCAAATCGTGAGGCTATTCAGATGTTTTGT ATGTATGCTTTTGGTCAAAAGTCCCCTGAAGATGGTTTTGAGAACCTCGTATGGGAAGTTACAAGACTCGCCGGTAAACT CCCTTTGGGACTAAGGCCGCTTAGCAATCTCAAGTGGGTGGATCTGAGGTATTCAGAAAACTTGAAGGATGTTTCTAGTC TCTCAACTGCCACTAGTCTAGAGGAGCTAAGTCTCAGTGGATGTTCAAGTTTAGTGGAGCTTCCCTCTTCTATTGGGAAT GCCATTCATCTCAAAATGTTGGATCTCAGTGGATGTTCAAGTTTGGTAGAGCTTCCCTCTTCTATTGGGAATGCCATTCA TCTCAAAAAATTGGATCTTAGTGGATGTGTAAGTTTGGTAAAGCTTCCTTCCTCTATTGGGAATGCCGTTCATCTCAAAA AGTTGTATCTCAGTAAATGTTCAAGTCTGGTAAAGCTTCCTTCCTCTATTGGGAATGCCATAAGAAACTTCGAGGAATTG GATTTTAGTGACTGCTCAAGTTTAGTAGGAGTCCCTTCCTCTATCGGAAACGCCACTAATCTCAAGCGTTTGGATTTTAG TAGATGCTCAAGTCTTGTGGAACTTCCTGCCTCTATTGGAAACCTCCATAAACTAGAAACTTTGATTTTGGAAGAATGTC GCAAGCTGGAGGCTCTTCCTGTCAACATCAACTTGAAATCTCTGACGACACTTGATCTCACTGATTGCTCCTTGATGAAA AGTTTTCCTGAGATCTCGACAGACATCGAATATATGTATCTCGCTGGAACTGCGATTAAAGAAGTGCCTTCATCGATCAG CTTGTGGCCTCGTCTTCATGTCTTGCATATGTCATACAACGAGAACCTCAAGGAGTTCCCTCATGTTCTTGACATCATGA CAGATTTGGTCATGAGCAACACAGAAATACAAGAGATTTCTCCTTGGATCAAGAGAAGCTCTCGTCTTTTTGGTCTTGTA GTCAACGGATGCAAAGAGCTTTTGTCACTCCCACAGCTTCCAAGTTCATTATCAGACCTACACGCAGAAGATTGTGAGTC TCTGGAGAAGCTAGACTGCTCCTTTCTTAATCAAAAGATTGATCTCAACTTCGCCAACTGCTTCAAACTGAATAAAGAAG CGATAGATGTCATCATCAAGTCATCGACTTATTATGTTACGATATTACCCGGCAAAGAAATGCCTAACTACTTCAATTAT CAAGCTAATGGAGGTTCACTAGTAATGAAGTTGAACGAGAGGCCTTCACCTTCATCAATGAGATGGAAGGCTTGCATCTT ACTTGTTAGTAAAGATGAGGATGAAGCTGGTATAGGAGAAATGGTGAATGTACATCATGGGATCAAACAGAATAGCCTCG ATGTCTCGTGCATTCCAAGAAACCACACTCTGTATCGCCCTTTAACCGAACATCTGTACATCTTTGAATTCGAAGCAGAC GTGACTTCAGACGAACTTTGCTTTGAGTTCAGGGTAGTCAACAAAGAAGAATGGATGATAAAAGAATGTGGAATGCATTA CGTTAATACCAGTTGA |
| AA seq | Len:912 aa MDLYLLLVIVATLLCSRIFSFVYAKFRVQENKIIASSSSSPPSPKLSLPSNRVHDVFPSFHGKDVRKSFLSHFLKECGIK GINLFIDNEITRGEFIGPELKKAIQGSRIAIVLLSKRYASSSWCLDELVEIMKCKEELGQTVMPVFYEVDPTDVKKQAGD FGKVFKKTCKGKTNEVTRKWSEALAKVATLAGYHSNNWDNEAKMIEDVATDVAKKLFNSTPSRDFDEFIGMEAHMNKISR VLRTYLDEVRMIGIWGPAGIGKTTIARCMFNQLSHTFQHSVFLMNVKAMCTPPVCSDDYNVKLHLQQIFLSQLTNQKEDF KISHLGVAQERLNDKKVLVVLDNVDRLVQLEAMAKKTGWFGNGSRIIITTQDRKILKAHGITHIYKVDFPSNREAIQMFC MYAFGQKSPEDGFENLVWEVTRLAGKLPLGLRPLSNLKWVDLRYSENLKDVSSLSTATSLEELSLSGCSSLVELPSSIGN AIHLKMLDLSGCSSLVELPSSIGNAIHLKKLDLSGCVSLVKLPSSIGNAVHLKKLYLSKCSSLVKLPSSIGNAIRNFEEL DFSDCSSLVGVPSSIGNATNLKRLDFSRCSSLVELPASIGNLHKLETLILEECRKLEALPVNINLKSLTTLDLTDCSLMK SFPEISTDIEYMYLAGTAIKEVPSSISLWPRLHVLHMSYNENLKEFPHVLDIMTDLVMSNTEIQEISPWIKRSSRLFGLV VNGCKELLSLPQLPSSLSDLHAEDCESLEKLDCSFLNQKIDLNFANCFKLNKEAIDVIIKSSTYYVTILPGKEMPNYFNY QANGGSLVMKLNERPSPSSMRWKACILLVSKDEDEAGIGEMVNVHHGIKQNSLDVSCIPRNHTLYRPLTEHLYIFEFEAD VTSDELCFEFRVVNKEEWMIKECGMHYVNTS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | - |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |