Names & Information
Knowledge of BnaC01G0485400GG:
| Gene Name | BnaC01G0485400GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA01g33780D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:2325 nt ATGGATCTTTACCTTATCCTTGTGATAATTGCTACGCTTTTGTGTAGTAGAATCTTTTCTTTTGTTTATGGAAAGTTCAG AGTCCAAGAAAACAAAATAATTGCTTATTCTTCTTCATCACCATCTCCACCATCTCCCAAGTCAACTTTGACTCGTAACT GCATACACGATGTCTTCCCTAGCTTCCACGGAAAAGACGTCCGTAAATCCTTTCTCAGTCATCTTCTCAAGGAGTGTGGG ATCAAAGGAATCAACCTGTTCATCGATAACGAGATCACTAGAGGAGAGTTTATCGGCCCTGAGCTCAAGAAGGCAATTCA AGGATCAAGAATTGCGATTGTGTTGCTCTCGAAAAGATACGCTTCTTCCTCTTGGTGTCTTGACGAGTTAGTGGAGATTA TGAAGTGTAAGGAAGAGTTAGGTCAAACAGTGATGCCTGTTTTCTATGAAGTGAATCCAAGTGATGTCAAGAAGCAGGCC GGTGAGTTTGGGAAAGTCTTTAAGAAAACTTGTAAAGGTAAAAAAAATGAGGTTATTAGAAAATGGAGTAAAGCTCTAGC AAAAGTGGCCACACTCGCTGGTTACCATTCAAAGAACTGGGATAATGAGGCAAAAATGATCGAAGATGTTGCCACTGATG TTGCAAAAAAGTTGTTTAACTCCACGCCGTCAAGAGATTTCGATGAATTCACTGGGATGGAAGCTCACATGAACAAGATT TCGCTGGTTTTAGGCACAGATTTGGATGAAGTGAGGATGATAGGGATTTGGGGGCCGGCTGGGATTGGCAAGACCACCAT TGCTAGGTGTCTGTTCAATCAACTATCCCATACTTTTCAATACAGTGTCTTTATGATGAATGTCAAAGCAATGTGTACTC CACCGGTTTGTTCAGACGACTACAACGTGAAGTTGCATTTGCAGCAAATGTTTCTGTCTCGATTAACCAACCAGAAGGAA GATTTCAAGATTTCTCACTTGGGAGTTGCACAAGAAAGACTGAATGACAAGAAAGTTCTTGTTGTTCTTGATAACGTTGA TCGGTTAGTACAACTAGAAGCCATGGCCAAAAAAACTGGGTGGTTTGGTAATGGAAGTCGGATTATCATTACAACGCAAG ATCGTAAGATTTTGAAGGCACATGGGATCACTGATATTTACAAGGTTGATTTTCCGTCAGACTGTGAGGCTATTCAGATG TTTTGTATGTATGCTTTTGGTAAAAAGTCCCCTGAAGATGGTTTTGAGAACCTCGTATGGGAAGTTACAACACTCGCCGG GAACCTCCCTTTGGGACTAAGGGTTATGGGATCTTATTTTCGTGGAATGTCCAAGCAGGAGTGGGAGAATGAACTACCAG AGCTATGGAGATGCCTTGATGGAGAAATTGAGAGCATTTTGATGTTCGGTTATAACGCATTATCTCAAGAAAATAAAGAT TTGTTTCTTCATATTGCCTGCTTTTTCAACTATGTTATGATAGAGAAAGTGGCAGAGCATCTTTCAACGAGATTTTCTAA TATGAGGCAACGGCTTGACGTCTTAGCCGATAAGTCTCTCATATCTTTGGAAAGTGTATATGTGGATATGCATGATCTGC TAGTCCAGCTGGGTAGAGATATTGTCCGCAAACAGTCCAGTGAGCCTGGACAACGCCAGTTTCTGGTCGATGAAAGAGAG ATTTGTGAAGTACTGGCTGATGATGCAGCGGGTAGTACAAGTGTTATTGGCATAACGTTCTATAGAGACGAAATATATAT GAGTGAGAGAGCCTTTGAAGGAATGTCTAATCTCCAGTTCTTAAGATTCAGAGTGGAACGTGATGGTGAAGGAGATACAT TTCATCTATTTGGTGGAGCAAGCTATTTATCTCGCAAACTTAGATTACTAGATTGGAGCTATTTTCCGATGACATGTTTG CATTGTATTCCCAACCCAGAGCTCCTCGTGGAACTAATCATGCGTGAAAGCAAACTTGAGAATTTGTGGAAAGGAACTAA ACCGCTTAGCAATCTCAAGTGGGTGAATCTGAGTGAGTCTAAAAACTTGAAGGATGTTTCTAGTCTCTCGACTGCCACAA GTCTACAGGAATTAGATCTGAGAGGATGTTCAAGTTTAGTGGAGCTTCCATCTTCTATTGGGAATGCCATTCATCTCAAC AAGTTGGATCTCGCTAGATGTTCAAGTTTGGTAGAGCTCCCTTACTCTATTGGGAATGCCATTCATCTCGAAAAGTTGAA TCTCAGTGAATGCTCAAGTTTAGTGGGAGTCCCTTCCTCTATTGGAAACGCCACTAATCTCACGGATTTGGATTTTAGTG GATGA |
| AA seq | Len:775 aa MDLYLILVIIATLLCSRIFSFVYGKFRVQENKIIAYSSSSPSPPSPKSTLTRNCIHDVFPSFHGKDVRKSFLSHLLKECG IKGINLFIDNEITRGEFIGPELKKAIQGSRIAIVLLSKRYASSSWCLDELVEIMKCKEELGQTVMPVFYEVNPSDVKKQA GEFGKVFKKTCKGKKNEVIRKWSKALAKVATLAGYHSKNWDNEAKMIEDVATDVAKKLFNSTPSRDFDEFTGMEAHMNKI SLVLGTDLDEVRMIGIWGPAGIGKTTIARCLFNQLSHTFQYSVFMMNVKAMCTPPVCSDDYNVKLHLQQMFLSRLTNQKE DFKISHLGVAQERLNDKKVLVVLDNVDRLVQLEAMAKKTGWFGNGSRIIITTQDRKILKAHGITDIYKVDFPSDCEAIQM FCMYAFGKKSPEDGFENLVWEVTTLAGNLPLGLRVMGSYFRGMSKQEWENELPELWRCLDGEIESILMFGYNALSQENKD LFLHIACFFNYVMIEKVAEHLSTRFSNMRQRLDVLADKSLISLESVYVDMHDLLVQLGRDIVRKQSSEPGQRQFLVDERE ICEVLADDAAGSTSVIGITFYRDEIYMSERAFEGMSNLQFLRFRVERDGEGDTFHLFGGASYLSRKLRLLDWSYFPMTCL HCIPNPELLVELIMRESKLENLWKGTKPLSNLKWVNLSESKNLKDVSSLSTATSLQELDLRGCSSLVELPSSIGNAIHLN KLDLARCSSLVELPYSIGNAIHLEKLNLSECSSLVGVPSSIGNATNLTDLDFSG* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |