Names & Information
Knowledge of BnaC02G0037900ZY:
| Gene Name | BnaC02G0037900ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA02g13810D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:1863 nt ATGAATTGCAAGAAAAAGTTTGGTCAAATGGTGATACCGGTTTTCTACGGTTTGGATCCTTCTCATGTAAGAAAACAAAC CGGTGACTTTGGAAAGATCTTTGAAGAGACATGCCACAACAAAACAGAAGAAGTGAAAAGTAGATGGAAGGAAGCTTTGA CCAATGTAGCAAACATCCTTGGATACCATTCTGTGAGCTGGGGCAACGAAGCTACAATGATTGAAGCAATTGCCAATGGT GTTTTGGACAAACTGCTTTTAACTCCATCAAAGGATTTTGATAACTTTGTTGGCATTGAGGATCATATAGCTCAAATGAG TGCGTTGTTGCATTTGGAATCTGAAGAAGTGAGGATGGTTGGTATATGGCGTTCTTCGGGAATTGGTAAGACGACAATCG CAAGAGTTCTGTTCGGTCGGCTCTCTCGACACTTCCAAGATACTTTGGTGGGTGGAGATGAATGGTTTGGTCCTCGAAGC AGAGTCATTGTGATTACAAAAGATAAGCAGATTCTAAGGGGTCATGGGATAAAATGTATTTACGAGGTGGGTATGCCATC TGAAAATTTAGCTCTTCGAATGTTCTGTCAATCTGCTTTTAGACAAAATTATCCACCTGTTGGTTTCATGGAGCTCGCTA CTGTAGTTGCAGCACGAGCAGGTGGTCTTCCTTTGGGTCTAAACATTTTAGGTTCATGTTTGCGGGCGAGAAACAAGAAG TATTGGGTAGACATGTTGCCAACACTAGGGAAAGGGCTAGACGGAAAAATAGAAAAAGCCCTACGAGTTAGCTACGATGG ATTAGAGAGGAAGGAACATCAAGCATTATTTCGTCACATTGGATGTTTCCTTAACGGTGATGAAATCAAGAACATTAAGT TGATGCTTGCAGATAATACAAATATCGAAGAAATGGGAAAAGAAATTGTTCGTGCACAGTCAGACGAGCCAGGAGAACGT GAGTTCCTGATAGATTCAAAGGATGTATGCGATGTACTCGAAGACAGCACGGGTACTAAAAAGGTTCTAGGTATATCATT GAATATAGAAGATATTGATGAGTTGAGAATACATAAGACGGCCTTCAAAGGGATGCGGAATCTCCGTTTTCTAAACATGT ACACTAAGAAATGGGACCATGAAAAAGAAGTCATGTGGCGTTTTGGGGAAGGCTTTGACTATTTGCCGCCGAAACTTAGA TTCTTAAGGTTGGATGGATACCCAATGAAATGTATGCCTTCTAACTTTTGTCCTACATATCTCGTTAAGCTTCATATGCA AGGGAGCAAGCTAGAGAAATTGTGGGAAGGGGTTCATATTCTTCCAACCGGAATGAATCTGGAGTCTCTTGAACGGTTCA CTCTCAAGGGATGCTCGAGGTTGAAGAGTTTTCCTGATATTTCAACCAACATTTCCGTGCTCGATTTAAGCGAAACAGCC ATTGAAGAATTTCCATCTAGCTTGCGTCTAGAGAATCTTGCTGAGCTTGGAATGTGTAGAATGAAGAGTGAAAATTTGTG GGAAAGAGTCCAGGTGGATATACAACTTCATGTAAGTAATAATGGGGAGTCTACGTTCAAGTTAAAGAAATGGGGTATAA GTCTAAGTCTATTCAAAGACTATTCAGTAGCGAAGAACGGACTTAGTGATCAAAACATTCTTCCACGTGTTTATGGTATT TGCCATGAGACTGAACTAGGTGACGAACCTGGAGATGACTTGGTGGAAACGATGAGATGCAGGAAGCGAATGCGAATCAT TCTATTGTGTTTTGCAGACTACATGAAGCACCTGTCAAGAAACTACCGACTGTGCCCTGCCTCCAGACCCGTACACACAA CATGTCCATATCGACTAGCATAG |
| AA seq | Len:621 aa MNCKKKFGQMVIPVFYGLDPSHVRKQTGDFGKIFEETCHNKTEEVKSRWKEALTNVANILGYHSVSWGNEATMIEAIANG VLDKLLLTPSKDFDNFVGIEDHIAQMSALLHLESEEVRMVGIWRSSGIGKTTIARVLFGRLSRHFQDTLVGGDEWFGPRS RVIVITKDKQILRGHGIKCIYEVGMPSENLALRMFCQSAFRQNYPPVGFMELATVVAARAGGLPLGLNILGSCLRARNKK YWVDMLPTLGKGLDGKIEKALRVSYDGLERKEHQALFRHIGCFLNGDEIKNIKLMLADNTNIEEMGKEIVRAQSDEPGER EFLIDSKDVCDVLEDSTGTKKVLGISLNIEDIDELRIHKTAFKGMRNLRFLNMYTKKWDHEKEVMWRFGEGFDYLPPKLR FLRLDGYPMKCMPSNFCPTYLVKLHMQGSKLEKLWEGVHILPTGMNLESLERFTLKGCSRLKSFPDISTNISVLDLSETA IEEFPSSLRLENLAELGMCRMKSENLWERVQVDIQLHVSNNGESTFKLKKWGISLSLFKDYSVAKNGLSDQNILPRVYGI CHETELGDEPGDDLVETMRCRKRMRIILLCFADYMKHLSRNYRLCPASRPVHTTCPYRLA* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |