Names & Information

Knowledge of BnaC02G0045700ZS:

Gene Name
BnaC02G0045700ZS
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC02g03820D [Brassica napus]
Best Hit (SwissProt)
Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1
NT seq
Len:1686 nt

ATGGCTTCTTCTCGCAGTTGGTTATACGACGTCTTCCCGAGCTTCAGCGGAGAAGATATCCGCCAAACATTCCTCAGCCA
CTTTCTCAAAGAGCTAGATCGTAAGTTGATCATTGCTTTTAAGGATAACGAGATCGAGAGAAGCCAGTCTCTTGATCCCG
AGCTTAAACGAGCGATCAAGGAGTCGAGGATCGCTGTCGTTATCTTTTCCAGAAACTACGCATCTTCAAGCTGGTGCTTG
AACGAGCTTCTCGAGATTTTTCAATGCAAAGAAGAACACGGTCAATATGTGATACCAGTTTTCTACGGTTTGGACCCTTC
TCACGTTAGGAAACAGAACAGCGACTTCGGAGAGGTCTTTGAGATGACTTGTCAGAATAGAACAGAAGACGAGAAAAATG
TGTGGAGGAGAGCTTTAACCGATGTAGCTAATATGGTTGGATATCATTCTTCCAACTGGGATAATGAAGCAAAGATGATA
GAAGAAATGGCCAATGATATTTTGGTTAAACTGAATTTGACTCCATCAAAGGGTTTTGAGGACTTTATAGGCATCGAAGA
TCATATAGCAGATATGAGCTCATTGTTGCGTTTGGAATCTGAAGAAGCGAAGATGGTCGGTATATGGGGCTCCTCGGGGA
TTGGCAAGACCACCATCGCAAGGGCTCTATTTAGTCGAATCTTTCGTCATTTCCAAGGTAGTGTCTTCATAGACAGTGCT
TTCATATCCAAGTGTAGGAAAAACTATCACAAAGCCAGTCCAGATGACTATAACATGAAGTTGCATTTGCAACGAAATTT
CCTGTCTGAGATTTTTGGAACAAGGGACATTAAGATGGATCATATAGGTGCAATGGGAGAGAGGCTAAAGCACCATAAAC
TTCTTATTGTCATTGATGATTTGGAAGATCAAGTGGTTCTAGATGCTTTGGCTGGTAGAACTCAATGGTTTGGACTTGGG
AGCAGAATCATTGCGGTTACAAGAGATAAGCATCTTCTGAGAGCCCATGGGATTAGCTGTATTTACAGGGTTGGTCTCCC
ATCTGAAAAGCAAGCTCTTCAGATGTTTTGCCGATATGCTTTCAGGCAAGATTCTCCACCTGATGGTTTCGTGGGACTTG
CTTCTGAAGTAGGAAAGCGTGCAGGTAGTCTTCCTTTGGGTCTTAACGTATTGGGTTCGTATTTGAGAGGAAGGAGCAAA
GATGATTGGACGGAAATGCTGCCTAGGCTTCGTAATAGGCTTAACGGAAACATTGAGAAAACGTTGAGAGTCAGCTATGA
TGGGTTAGGTAGCAAAGAAGACAGAGCGTTATTTCGCCACCTCGCATGTCTCTTCAATGGTGCGGAGATCGATCACATCA
AACGGGTCTTAGCAGATAGTGATTTGGATATTAACATAGGGCTGAAAAACCTAGTTGATAAATCCCTCATACAAGTAAGA
GAGGATACTGTGGAGATGCATTGTTTGTTACAAGAAATGGGTAAAGAAATCATCCGTTCGCAGTCTAAAGAACCCGGGGA
ACGCGAATTCTTGTGGGATTCTAAGGATATTTGCGATGTACTTGAGGATAACACGGGTACTAAAAAAGTGTTAGGTATAT
CGTTGGATATGTCTGGGATTGATGAGTTGCACATACATAAGGGAGCCTTTAAAAAGATGCGTAATCTCTTTTTTTCTGAA
GATTAA
AA seq
Len:562 aa

MASSRSWLYDVFPSFSGEDIRQTFLSHFLKELDRKLIIAFKDNEIERSQSLDPELKRAIKESRIAVVIFSRNYASSSWCL
NELLEIFQCKEEHGQYVIPVFYGLDPSHVRKQNSDFGEVFEMTCQNRTEDEKNVWRRALTDVANMVGYHSSNWDNEAKMI
EEMANDILVKLNLTPSKGFEDFIGIEDHIADMSSLLRLESEEAKMVGIWGSSGIGKTTIARALFSRIFRHFQGSVFIDSA
FISKCRKNYHKASPDDYNMKLHLQRNFLSEIFGTRDIKMDHIGAMGERLKHHKLLIVIDDLEDQVVLDALAGRTQWFGLG
SRIIAVTRDKHLLRAHGISCIYRVGLPSEKQALQMFCRYAFRQDSPPDGFVGLASEVGKRAGSLPLGLNVLGSYLRGRSK
DDWTEMLPRLRNRLNGNIEKTLRVSYDGLGSKEDRALFRHLACLFNGAEIDHIKRVLADSDLDINIGLKNLVDKSLIQVR
EDTVEMHCLLQEMGKEIIRSQSKEPGEREFLWDSKDICDVLEDNTGTKKVLGISLDMSGIDELHIHKGAFKKMRNLFFSE
D*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0000166
Pfam
NB-ARC domain
KEGG
disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A)