Names & Information
Knowledge of BnaC02G0070300GG:
| Gene Name | BnaC02G0070300GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | disease resistance protein [Brassica rapa subsp. pekinensis] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:7041 nt ATGGCTTCTCTGTCTCGAACTTGGAAGTATGATGTCTTCCCGAGCTTCTGTGGAGGAGACGTGCGCAAAGGCTTTCTTAG TCACTTGATGGAAAAGCTCAAAAGCAAGGGAATCAGACCTTTCATTGACGATGACATTAAGCGAGGCCAGCCTATCGGTC CCGAGCTCGTACTAGCGATCAGAGAGTCAAGGGTTGCCATTGTCTTGCTCTCCGTTAACTACGCTTCTTCAAGCTGGTGT TTGGATGAGTTAGTGGAGATCATGAAAGGCAAGGCAAAGGATCAAGATGAGTTGGAGGAAATCATGGAGAGGGATCAACA AAAAGTGATATCCATTTTCTACGAAGTGGATCCATCTGATGTTAGGAAGCAGACCGGAGATTTCGGGAAAGCCTTTGAAA AAACCTGTGGGGAAAGAAGAAAAGGTAAAGGCATGGAGGGAAGCTTTGGAGGGTGTCGCCAATATAGCTGGCACAACGAA GCTGATTTGATCAACAAAATTGTGGTAGAGCTTATGGATGTGTTGGGTATTACAAAATCAGATGACTTTGTTGGCATGGA AGCTCGTATCTCGGAGATAAAGTCGAAGTTCACCCTACAATCAGAGGACGTTAAGATTATAGGAATTGTGGGCCCTCATG GGAGTGGTAAGACGAGCACTGCCAGAGCTTTGTACAACCAACTCTCTCCTGACTTTCCATTCAGCACGTTTATTGAGAGT GTCAGAGAAAGTAATGAGATACCTTCTCTTGATGGCTCCCATAATCAAACTCAAATGGATTATCAGGAACAGTTACTGTC TGGGATTTTCAATCAAAGGGAAATTGAGGTTGGTCACTTGGGAGTGACTCAAGAAAAGCTGAGTGACAAAAAAGTGTTGG TTGTTCTTGATGACGTGGATAGCTTGTGGCAACTAGAGAAAATGGCAAACGAGCCTGGATGGTTAGGTCCCGGAAGTAGG ATTATCATTACAACCCAAGATAAAAAACATCTCAAGGCACTCGGACTCAAGAATCCCGATCATATCCACGAGATTAAATT TCCAGATGAAGTTGACGCATTTCAGATCTTCTGCCAATATGCTTTCGGTCAAAAGTCTCCATATCCTGGTTTCGAAGAGC TTGCTTGGGAAGTTACTGAACTAGCTGGTAATCTTCCTCTAAACCTAAAAGTCATGGGATCGTATCTTCGAGGATTGTCT AGGAAAGAATGGATAGATGCACTACCAAGGCTAAAGTCTAGCCTCAAAAATGAATCAACTCTAAGATTCAGCTACGACGG TTTATTGCAACAAATGGGTAGAGAAATTGTCAAGAAACAGTCTTTGGAGGAGCCTGGAAAGCGAAAATTCTTGATGGATA CCAATGATATTTCCCAACTACTTCATAAAGAAACTGGTACTGGAAATGTTCTAGGCATAATGTTGCGTACATCAGGGAGC GAGGAAATCCAGATAAGTAAAAGCGCTTTTCAAGGGATGAATAACCTCCAGCTTCTAACAGTCGACTCTAAAACCTTATG CATACCAGATGGGCTCAACTGTTTTCCCTACAAACTCAGACTTCTAGATTGGAAAGACTGTCCACTGACATTGTGGCCTT CCAAGTTTTCTTTCAAGTTTCTTGTGGAACTAATCATGGAAGAGAGCAATTTTGAGAAGCTTTGGGAGGGAATCAAACCT CTCCCATGCCTCAAGGTGTTCAATTTGAGTTTCTCCAAGTATCTGAAAAAGATTCCAGATCTCTCAGAAGCAACGAGTCT AGAGAAACTAAATCTTCGTGGCTGCGGAAGTTTGTTAGAGATCACAAGCTCTATTGGCAATGCCACTAAGCTTACAGTCT GCAACCTTCGGGGTTGCTTGCTTTTGAAGAGGCTCCCCTCATCTATAGGTACATTAATCAGTCTAGAGGTATTGGATATT ACAGGGTGTTCACACATCGAAGACTTCCCAAATGTGCCTGACAGCATTGTGGAGTTGGTGTTGAGCTGTACTGGGATAGA AGAGGTTCCTCCATGGATTGAGAAGCTATTTCGTCTGCGAAAACTAATTATGAATGGATGCAAAAATCTGAAAATATCTC CAAACATTTCTAAGTTGGAGAATCTTGAGTTTCTTGCTCTGCGTATCTATGGCTTTTGTGAGGATGATGAAGCTGATGAA GATGAGCTAAATATAAATACTGATGCTAATTTATATGAAGCAATAATCGAGTGGGGGCCTGAATGGAAGGGAAGTTGGAG ATTACAATCAGACTTCGACGTACACTACATTTTGCCGATATGTCTACCCATGAAGGCTCTTACGTTTCCAATATCATTAC GTTTCCGCGGTAATGGTTTCAAGACTATTCCAGATTGCATCAGCCGTCTGTCCGGACTAAGTAAACTTGACGTCACAGGA TGCAGAGACCTCGTAGCACTTCCACCGCTTCAAGGTTCCCTTCTATCTCTAGAAGCACAAGGTTGTGCATTCTTGGAGAG AATAAACTCTTCTTTTCAAAATTCAAAGGTTTGCCTAAACTTTGCTAACTGCTTCAACCTGAATCCAAAAGCAAGAAGGC TTATCCTGACATCAGCTTGCAAATATGTTCTCTTACCGGGTCAAGAAGTTCCTGCACACTTCTCTCACCGAGCTACTTCA GATTGCCTAACGATCAATTTGACTCCTAGACCTCTTCCCTCATCCTTCAGATTCAAAGCTTGCATCTTGCTGTCAGAAGG CAATATTAATCCCAAGGATTCCACTTCCGTAGATGTGAATGATTCATTCGTGGGTGTCACTTGTCGTGTCAGGGGTAAAC AGAATGGCCTCACAGTCGGGCGTGGATCAACCCAGGTCCATATTCCAGATCTATATGGACGTAGAGAGAATTTGTATATA TTTGAAGATTCTTTCTCTCTAAACCAGGATTACCCTGAAACCGAAGAAACCACTTTCAGCGAGCTTTCTTTTGAGTTCAT ATTCCATGATAAAGCCTGGAAGGTCAAAGGCTGCGGTGTACTACTTTTACAGGAGAATCTTAAGCTTCTTGTTCTGTGTA CTGGTTGCTGTGGTATGTCTGGTGAGTATGTTGAATACAATGATGCTGCAATAATCGAGTGGGGGCCTGACTTGAAGCAA CGTTGGAGATTATTATCAGACTTCGGCGTTGACAACATTTTTCCGATTTGTCTACCCGACAAGGCTCATACATCTTCAAT ATCATTACGTTTTCGCGGTAATGTTTTGGAGACTATTCCAGACTGCATTGGACATCTCTTCCGACTATGTATGCTTGACA TCAAAGAATGTAGCACTTCCACTGCTTCCACATTCAAAGCTTGCATCATGCTGTCAAAAGGCAATATTAATCTCGAGGAT GATAATCATGACGATGATGAAGAGGGTGAAACTTCATTGAGGCGTTTGTCTTGTCGAGCTTTACATGATTACCAGGATTT TATTGATGTTAGTTTATGTTTCATTGCGTGCTCTCTACTCATGGCTTCTCTGTCTCGCACTTTGAAACATGATGTCTTCC CGAGCTTCTGTGGACGAGACGTGCGCAAAACCTTTCTTAGTCACCTTCTGAAAGAGCTCAAAAGCAAGGGAATCCAAACT TTCATAGATGACGAGATTGAACGAGGCCAACGTATCGGTCCCGAGCTCGTACTAGCGATCAGAGAGTCAAGGGTTGCCAT TGTCTTGCTCTCCGTTAACTACGCTTCTTCAAGCTGGTGTTTGGATGAGTTAGTGGAGATCATGAAAGGCAAGGCAAAGG ATCAAGATGAGTTGGAGGAAATCATGGAGAGGGATCAACAAAAAGTGATATCCATTTTCTACGAAGTGGATCCATCTGAT GTTAGGAAGCAGACCGGAGATTTCGGGAAAGCCTTTGAAAAAACCTGTGTGGGGAAAGAAGAAAAGGTCAAGGCATGGAG GGAAGCTTTGGAGGGTGTCGCCAATATAGCTGGTTATGATTCTCGGAGATGGGAAAACGAAGCTGATTTGATCAACAAAA TTGCCGTTGAGCTTATGAGTGTATTGGGTTTTACACCATCAAAAGACTTTGATGACTTTGTTGGCATAGGAGCTCAAATC ACGGAGATAAAATCAAAGTTGATCCTACAATCAGAACAAGTTAAGATGATTGTGCTTGTGGGTCCTGCCGGGATTGGTAA GACAACCACAGCAACAGTTTTATACAACCAACTCTCTCCTGGTTTTCCATTCAGCACTTTTTTGGAGAATATCAGAGGAA GTTATGAGAAGCCTTGTGGTAACGACTATCAGTTGAAGTTGCGTTTGCAGAAAAAAATGTTGTCTCAAATATTCAACCAA AGTGATATTGAGGTTGGTCACTTACGAGTGGCTCAAGAAAAGCTGAGTGACAAAAAAGTGTTGGTTGTTCTTGATGAAGT GGATAGCTGGTGGCAACTCGAGGCAACTGCATACCAGCGCGGATGGTTTGGTCCCGGGAGTATTATTATCATTACAACCG AAGATAGAAAACTTCTCAAGACACTCAGATTGGGAATCAATCATATCTACGAGATGAAATATCCTACTGAAGATGAGTCT CTTCAGATCTTCTGCCAATATGCTTTCGGTCAAAACTCACCATATGATGGTTTTGAAGGGCTTGCTCTAGAAGTTACTTG GCTTGCTGGTGATCTTCCTCTAGGCCTGAGAGTCATGGGATCTTATCTACGAGGAATGTCCAGGGACGAGTGGATAGAGG CACTACCAAGGCTCGGGTCTAGCCTTGACAGAGAAATTGAATCAACTCTAAGATTTAGTTACGACGGGTTAAGTGATAAA GATCAAGCTCTTTTTCTGCATATTGCATGTTTCTTTTCTTGTTCCCTCTGGAACGTTGATAGAGTTAAGAGGTGTCTTGC AAACTGTGGTCTGGACGTCAACCATGGACTTCAAGTCTTAGCTGATAAATCTCTTATATATATAGTTTACAAGGGATGCG TAGAGATGCATAGTTTACTTCAAAAAATGGGTAGAGAAATTGTCAAGAAACAGTCTTTGGAGGAGCCTGGAAAGCGACAG TTCTTGATGGATATAGAGGAAATTTTTGAAGTACTTGAAAAAAATACTGGTACTGGAAAAGTGCTAGGCATATATTTGAC TTGGGGTCGGAGCCTCCAAATAAGTAAAGGGGCTTTCGATGGGATGAATAATCTCCGGTTTCTAAATGTCTACTATGGTC CCTTATGCATGCCCGAGGGCCTCAACTGTTTTCCCGACAAACTCAGATTGATAGATTGGCCCTACTGTGCATTGAGATTT TGGCCTTCCAAGTTCTCTTTCGAGTTTCTTGTCGAACTAATTATGCCCAAAAGCAATTTTGAGAAGCTTTGGGAGGGAAT ACAACCTCTCCCTTGCCTCAAGCTGATGGATTTTAGTAGCTCTGAGTATCTGAAAGAGATTCCTGATCTCTCAAAAGCAA CTAGTCTCGAGAGATTAGATCTCTGTCACTGCGAAAGTTTGTTAGAGCTCACAAGCTCTATTGGCAGTGCAGCTGAGCTT GAGCTATATATGGGCCACACTGCAATAGAGGAATTGCCATCATCAATCAGCACTTGGTCTTGTCTTTATAAATTGAGTAT TTCAGGGTGTAAAAACATCAAAGACTTCCCAAATATTCCTGACAGTATTGTAGAGTTGAATTTGAGCAAGACAGGTATAG AGGAGGTTCCTCCATGGATTGAGAAGCTATTTCGTCTGCGTAAGCTAAGTATGTTTGGATGCGAGAAGCTGAAAACTATA TCTCCGAACATTTCCAAGTTGGAGAATCTTGAGGTTCTTGCTCTGAGTAGCGTTTACCGCTGGGACGAGGATCCTGAGTA TTGCGATTTCATCAATTACGATGAAGCAATAATCGAGTGGGGGTCTGAAATGAAGCGACGTTGGAGTTTAGAAACAGACT TCGATTTTGACAACCTTTTGCCGATATGTCTACCCGAAAAAGCTCTTACATCTCCAATATCATTACGTTTCGGCCATGAA GGTTTCAAGACTATTCCAGATTGCATCAGCTGTCTCTCTGGACTAATTAAGCTTGACATCACACAATGCAGAGAGTTCGT AGCCCTTCCACCACTTCCAGGCTCCCTTCTATCTATTGATGCACACGGTTGTGAATCCTTAGAGAGTATAGACTCCTCCT CTTTTCAAAATCCAAACATTTGCCTAGACTTTGCTCGCTGCTTCAACCTGAATCAAGAAGCTCGAAAGCTCATCCAGACA TCAGCTTGCAAATATGCATTCTTACCTGGTGAAGAAGTGCCTGCACACTTCACTCACCAAGCTACTTCAGGCTGCCTAAC GATCAATATGGCTCCAACACCTCTTCCTTCATCCTTCAGATTCAAAGCTTGCATCTTGCTGACAAATGATGAGGATGATG ATGAGGATGAGGATGAGAATTCGTTGATATTTTGTCGCGTCAGTGGTAAACAGAATGGCCACACTGTCCAATATGGATCA AACCAGGTCCACCATATGCCATATCTCAATGGCCAAGCAGAGCATCTTTATATATTTGAAGATTCGTTCTCTCTAAACCA GGATTTTCCTGAAGCCGAAGAAGCCACTTTCAACGAGCTTTTTTTCAAGTTCAGAGTCCATGATGAAGGATGGAAGGTCA AAGGCTGCGGTGTACGACTATTGGAGGAGGTCCCCCAATGTATTCTTGACGGAAAAGAAACTGAAGACGAAGAATGTAGA GGCATAAACATAGAGGCAAACAATGAAAATGCAGGTGATGAGGATAAAGAAAAGGAAGATGATGATAATAGTGGTGAAGG TGCTGAAGATGAAGTGGATGAAGGTGTTGATGTTGAGGAGGATATAGATGGTAACGACGCTGGATTTTCTGATGCAGGAA TGGACATAAACATAGAAGCAAACAATGAAACTGAAGAAGAAGGAGAAGAATCTGGACGTGATGAGGATTCAGAGACAATG ATCAGGAAACGAAAGAGTTTAGGCCTTGGCTCGTCTGAGAACTCTTTGATAACGATGATGAAGAGGATGAGAATTCATTG A |
| AA seq | Len:2347 aa MASLSRTWKYDVFPSFCGGDVRKGFLSHLMEKLKSKGIRPFIDDDIKRGQPIGPELVLAIRESRVAIVLLSVNYASSSWC LDELVEIMKGKAKDQDELEEIMERDQQKVISIFYEVDPSDVRKQTGDFGKAFEKTCGERRKGKGMEGSFGGCRQYSWHNE ADLINKIVVELMDVLGITKSDDFVGMEARISEIKSKFTLQSEDVKIIGIVGPHGSGKTSTARALYNQLSPDFPFSTFIES VRESNEIPSLDGSHNQTQMDYQEQLLSGIFNQREIEVGHLGVTQEKLSDKKVLVVLDDVDSLWQLEKMANEPGWLGPGSR IIITTQDKKHLKALGLKNPDHIHEIKFPDEVDAFQIFCQYAFGQKSPYPGFEELAWEVTELAGNLPLNLKVMGSYLRGLS RKEWIDALPRLKSSLKNESTLRFSYDGLLQQMGREIVKKQSLEEPGKRKFLMDTNDISQLLHKETGTGNVLGIMLRTSGS EEIQISKSAFQGMNNLQLLTVDSKTLCIPDGLNCFPYKLRLLDWKDCPLTLWPSKFSFKFLVELIMEESNFEKLWEGIKP LPCLKVFNLSFSKYLKKIPDLSEATSLEKLNLRGCGSLLEITSSIGNATKLTVCNLRGCLLLKRLPSSIGTLISLEVLDI TGCSHIEDFPNVPDSIVELVLSCTGIEEVPPWIEKLFRLRKLIMNGCKNLKISPNISKLENLEFLALRIYGFCEDDEADE DELNINTDANLYEAIIEWGPEWKGSWRLQSDFDVHYILPICLPMKALTFPISLRFRGNGFKTIPDCISRLSGLSKLDVTG CRDLVALPPLQGSLLSLEAQGCAFLERINSSFQNSKVCLNFANCFNLNPKARRLILTSACKYVLLPGQEVPAHFSHRATS DCLTINLTPRPLPSSFRFKACILLSEGNINPKDSTSVDVNDSFVGVTCRVRGKQNGLTVGRGSTQVHIPDLYGRRENLYI FEDSFSLNQDYPETEETTFSELSFEFIFHDKAWKVKGCGVLLLQENLKLLVLCTGCCGMSGEYVEYNDAAIIEWGPDLKQ RWRLLSDFGVDNIFPICLPDKAHTSSISLRFRGNVLETIPDCIGHLFRLCMLDIKECSTSTASTFKACIMLSKGNINLED DNHDDDEEGETSLRRLSCRALHDYQDFIDVSLCFIACSLLMASLSRTLKHDVFPSFCGRDVRKTFLSHLLKELKSKGIQT FIDDEIERGQRIGPELVLAIRESRVAIVLLSVNYASSSWCLDELVEIMKGKAKDQDELEEIMERDQQKVISIFYEVDPSD VRKQTGDFGKAFEKTCVGKEEKVKAWREALEGVANIAGYDSRRWENEADLINKIAVELMSVLGFTPSKDFDDFVGIGAQI TEIKSKLILQSEQVKMIVLVGPAGIGKTTTATVLYNQLSPGFPFSTFLENIRGSYEKPCGNDYQLKLRLQKKMLSQIFNQ SDIEVGHLRVAQEKLSDKKVLVVLDEVDSWWQLEATAYQRGWFGPGSIIIITTEDRKLLKTLRLGINHIYEMKYPTEDES LQIFCQYAFGQNSPYDGFEGLALEVTWLAGDLPLGLRVMGSYLRGMSRDEWIEALPRLGSSLDREIESTLRFSYDGLSDK DQALFLHIACFFSCSLWNVDRVKRCLANCGLDVNHGLQVLADKSLIYIVYKGCVEMHSLLQKMGREIVKKQSLEEPGKRQ FLMDIEEIFEVLEKNTGTGKVLGIYLTWGRSLQISKGAFDGMNNLRFLNVYYGPLCMPEGLNCFPDKLRLIDWPYCALRF WPSKFSFEFLVELIMPKSNFEKLWEGIQPLPCLKLMDFSSSEYLKEIPDLSKATSLERLDLCHCESLLELTSSIGSAAEL ELYMGHTAIEELPSSISTWSCLYKLSISGCKNIKDFPNIPDSIVELNLSKTGIEEVPPWIEKLFRLRKLSMFGCEKLKTI SPNISKLENLEVLALSSVYRWDEDPEYCDFINYDEAIIEWGSEMKRRWSLETDFDFDNLLPICLPEKALTSPISLRFGHE GFKTIPDCISCLSGLIKLDITQCREFVALPPLPGSLLSIDAHGCESLESIDSSSFQNPNICLDFARCFNLNQEARKLIQT SACKYAFLPGEEVPAHFTHQATSGCLTINMAPTPLPSSFRFKACILLTNDEDDDEDEDENSLIFCRVSGKQNGHTVQYGS NQVHHMPYLNGQAEHLYIFEDSFSLNQDFPEAEEATFNELFFKFRVHDEGWKVKGCGVRLLEEVPQCILDGKETEDEECR GINIEANNENAGDEDKEKEDDDNSGEGAEDEVDEGVDVEEDIDGNDAGFSDAGMDINIEANNETEEEGEESGRDEDSETM IRKRKSLGLGSSENSLITMMKRMRIH* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |