Names & Information
Knowledge of BnaC02G0084200ZS:
| Gene Name | BnaC02G0084200ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC02g07560D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3216 nt ATGAAAGAAAGAATGGATCAAAGTAAGCTCGTGGTGATACCAATCTTCTACAAGTTGGAGCCTGCAACTGTTAAAGAATT GAAGGGAGAGTTCGGTGATAAGTTTAGGGAGCTGGTCAAGTCTATTGACAAGAAGACAAAGAACATATGGAAGGAAGCTT TAAAATCTGTTCCTCTCTTGATGGGCTTCGCGTTGGACGAGAAAAGCTATGAGGGCGAAATCATCACAAAAGTCGTCGAG GAGGTTAAGCAAGTACTAAACAGGCTTTCACAGACTTCTCTCAATCCCTCAGAATGTCTTGGAAAATCACCACATAAACA TCCAAAAAGCCAAGAAAGCTCTTGGGGAATCGAACACCGACTTAAGCAACTAGAAGAAAAGTTAAGCCTTGGGTTTGAAG AAACAACTCGTATCATTGGTGTTGTTGGTATGCCTGGCATAGGTAAAACAACTCTAGCTAGGAAGCTATACGAGAAGTTG AAGAACGAGTTCTTGAACCACGTGTTGATCCCAGATATTCATGAAATTTCAAAGGAACATGGTTTGGATTCCTTGCCCAC GATGCTCTTGGAAGATTTATTGAATGTCAAGGATCCCAACATTGAGACGTTACAAGATGCACACCAGCCTTACAAAGATC AACTACTCAAAACCAAAGTACTTCTTGTTTTTGACAATGTTACTAGCAGGAAACAACTTGATGCACTTCTCGGCAACCGC GACTGGATTAAGCAGGGAAGCAAGATTGTTATTGCAAAAAGCGATAAGTCGTTATTACAAAGTTTTGTTGATTATACTTA CGAGGTCCCTAGATTAACCGACAGAGACGCCTTGCAACACTTCATCCACTATGCATTTGATAATGATCAAGAAGGAGATC ATGCACTAAATTTCTCAAAGCTCTCTAAAGATTTCGTGCGTTACACGAAAGGAAACCCACTAGCTCTGAAGATACTTGGC GCAGAGCTTCTAGGGCAAGACGAGACTCACTGGGAATTAACATTAGCTGCATTGGCTCAACAACATAAAAGTCCACCGGG ACAAAGCACGACTAAGATGCTTCACAATGTTTGGAGAGGGAGCTATGATGGATTGAGTCAACAACAGAAAGATACACTAC TTGATATAGCGTGTTTTAGGTCGCTAGATGAGACTTACATAACGAGTTTATTGGATTCGGATGGTCTTAAAAATGAAGTA GAAGATCTAGTAAACAAGTTCATGATTAATATATATGCTGGTAAAATAGAGATGCATGATTCATTGTATATGCTCTCCAA GGAACTTGGTCAAGAAGCTACTGCTACAGATGGAAAGGGACGTCATAGGTTGTGGCACCATCACGCAATAACTAATGTGT TGGAGAAAAATAAGGGAGCTTCTAATGTCAGAGCTATTTTCCTTGACTTGTCTGATATAACAAGAAAAATGAGCTTCCAC AGTCATGCTTTTGCCAAGATGAGCTATCTACGATATCTCAAAATCTACAGCTCTCAGTGCCCTCAAGAATGTGACCGTGA CATTAAATTAAACTTCCCTGAAGGACTCCAGCTACCATTGAATGAGGTGAGATGTCTCCACTGGTTGAAGTTCCCATTGA AAGAAGTTCCACAAGATTTCAGCCCGGAGAACTTGGTTGACCTAAAGCTTCCTTACAGCAACATTGAACGTGTTTGGGAG GACAACAAGGAAGCATCAAAACTAAAATGGGTCAACTTGAACCACTCAAGGAAGTTGATCACTTTGTCAGGGTTAGGAAA GGCTCAAAATCTTCAAGAACTAAATCTTGAAGGCTGCACTGCATTGACAACGTTGCATGTGGATATGGAAAACATGAGGT GTCTTATTTTCTTGAACCTGAGAGGATGCACAAGTCTTGAGTCTCTTCCACGGATTCAACTAATCTCTTTGAAAACTCTC ATCCTCAGCGACTGTTCAAGTTTCAAAACCTTTCAGGTTATTTCAGATAACCTAGAAGCTCTATACTTGGATGGCACGGC AATAAAAGAACTTCCTTGTGACATACGTAACCTCCAGAGACTTATCTTATTGAACATGAAAGGTTGCAAGAAGCTGAAAA GGCTCCCTGAGAGTATTGGTGAGCTGAAATCTCTTGAAGAACTTCTACTCTCTGGTTGTTCAAAGCTCAAAGAGTTTCCG GAAACTGGAGGAAACATAGAGATTCTGCTTTTGGATGAGACAGCCATAGAAGAGATACCAATGGTATTTTCAGTTAGGCG TTTATGCTTAAGCAGGAATGAAAGAATCACTCGCCTTCCCGGTTTGATCAACCAGTTTTATCGACTGCAATGGCTTGATT TGACGCATTGTAAGAATCTTACACATGTTCCTCAGCTTCCACCAAATCTTCAGTGTTTAGATGCACGCGGCTGCAGCTCA CTGAGAACAATAGCCAAACCAATGGTATGTTCTGTCCTAACAGATCAGATCACCTCCAAGTTCATTTTCACTAACTGCAA TGAATTGGAACAAGCTTCAAAGGAGGAGATTGTAGCCTATGCTAAACAGAAGTGTCAGTTACTATCAACTGCACTTAAAC GCTGTAATGAGGGTTGTGTTCCTGAGATATTGTTCGACACAAGCTTCCCTGGATGTGAAATGCCTTCATGGTTTTCTCAC GATGCAATTGGATCTCTGGTGAAGTTTGAATTGCCTCCACACTGGAATCACAATAGGCTTTCAGGGATAGTCCTATGTGT TGTTGTCTCGTTCCGAAACTGTTCAAAGCAAGCCAGCTTGACAGTCAAATTCACTGGGGAGGGCTCTTGCACCAGCGTTA CTTGGAAGGTTGGAGGTTTGATTGAACGAGACAATGAAGGAGATCATGTCTTTATTGGCTACGCAAACGGCTTAGACTTT ATCAATCCTGTTGAAGGAGAAGAACCTCGTGAATGTGCTCCGACAAAGGCATCACTTGACTTTAGTGTGACAAGTGGTAC TGGTGGGGAAGAAGGTAGGTTTGAGGTTTTGAAATCCGGTTTCAGTTTTGTGTTTGATCCTGAAGAGATCAAAGCTTCAG TGCCAAGGGATCAAGACGAAGTCAAAGGTAAAACAAAAGTAAAGGGAACTCCAAATGCTAACGGTTGTTTCAAGGATCAA ACAGATGGATATAAATCTCCAAAGGGACAGTGTCAGAGTTACATGGAACGTTCTGGTATTAACATCACATGTGTGAGTGA AGCGCACTCTTCCTAA |
| AA seq | Len:1072 aa MKERMDQSKLVVIPIFYKLEPATVKELKGEFGDKFRELVKSIDKKTKNIWKEALKSVPLLMGFALDEKSYEGEIITKVVE EVKQVLNRLSQTSLNPSECLGKSPHKHPKSQESSWGIEHRLKQLEEKLSLGFEETTRIIGVVGMPGIGKTTLARKLYEKL KNEFLNHVLIPDIHEISKEHGLDSLPTMLLEDLLNVKDPNIETLQDAHQPYKDQLLKTKVLLVFDNVTSRKQLDALLGNR DWIKQGSKIVIAKSDKSLLQSFVDYTYEVPRLTDRDALQHFIHYAFDNDQEGDHALNFSKLSKDFVRYTKGNPLALKILG AELLGQDETHWELTLAALAQQHKSPPGQSTTKMLHNVWRGSYDGLSQQQKDTLLDIACFRSLDETYITSLLDSDGLKNEV EDLVNKFMINIYAGKIEMHDSLYMLSKELGQEATATDGKGRHRLWHHHAITNVLEKNKGASNVRAIFLDLSDITRKMSFH SHAFAKMSYLRYLKIYSSQCPQECDRDIKLNFPEGLQLPLNEVRCLHWLKFPLKEVPQDFSPENLVDLKLPYSNIERVWE DNKEASKLKWVNLNHSRKLITLSGLGKAQNLQELNLEGCTALTTLHVDMENMRCLIFLNLRGCTSLESLPRIQLISLKTL ILSDCSSFKTFQVISDNLEALYLDGTAIKELPCDIRNLQRLILLNMKGCKKLKRLPESIGELKSLEELLLSGCSKLKEFP ETGGNIEILLLDETAIEEIPMVFSVRRLCLSRNERITRLPGLINQFYRLQWLDLTHCKNLTHVPQLPPNLQCLDARGCSS LRTIAKPMVCSVLTDQITSKFIFTNCNELEQASKEEIVAYAKQKCQLLSTALKRCNEGCVPEILFDTSFPGCEMPSWFSH DAIGSLVKFELPPHWNHNRLSGIVLCVVVSFRNCSKQASLTVKFTGEGSCTSVTWKVGGLIERDNEGDHVFIGYANGLDF INPVEGEEPRECAPTKASLDFSVTSGTGGEEGRFEVLKSGFSFVFDPEEIKASVPRDQDEVKGKTKVKGTPNANGCFKDQ TDGYKSPKGQCQSYMERSGINITCVSEAHSS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |