Gene Name | BnaC02G0084600ZS |
Gene Location | |
Gene Structure | |
---|
Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | BnaC02g07600D [Brassica napus] |
Best Hit (SwissProt) | Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2 |
NT seq | Len:2976 nt
ATGCAAGTGATGGTCCCAGTGTTCTACGACGTTGATCCATTAACCCGAGTTTACGGGTGGGCCAATAGATGGCTGGAGGC
TGGATACATAACAATGCACCAATCAAGGATCTCAAGCAGTAAGATACTCACCGATTCCGAACTAGTGGAAGACGTCATCA
AAGATGTTTATGAAAAGCTCCATCGAACAGAACGAGTTGGAATTTACTCGAAGGTTTTGGAGATTGAAAACTTGCTTTAC
AAACAACCGTGGGACGTCCGAAGCATAGGTATCTGGGGTATGCCTGGCATAGGCAAGACGACACTTGCTAAAGCAGTCTT
TAACCACATGTCCTCTGATTATGATGTTTCTTGTTTTATCGAAAACTTTGATGAAGCGTTTCATAAAGAAGGACTTCACC
GTTTGCTTGAAAAAAAAATTGGTAAACTTCTAAAGGAAGTGTTTGACATAAAGGGTTCTTACATTATGAGACCGAGCCTC
CAAAGAGACAAACTATGCAATAAAAGGATTCTTGTTGTCCTGGATGATGTGCGTGATTCTCTGGCTGGCGAGTCCTTCCT
TAGAAGGCTTGATTGGCTTGGTCCTGGAAGCCTGATAATCATGACCTCTACTAATAAAAAAGTGTTTGCATATTGTGATA
TTTACCAAGTATATGAAGTTCATGGTTTAAACGAGCACGAGGCTCTCCAGTTATTCTTCCAAAACGCCTTTGAAAAAGAC
GTGCCAGAGCAAATCGACAGAGAAATATCAAGGAACGTTATCGAATATGCCAATGGAAACCCTTTGGCCCTCCGCATTTA
TGGTCAAGAGCTTAAGGGGAAGATGTCTGAAATGGAGGATGCATTCCTCAAACTCAAGCAACATCCTCCTCAAAAGATTC
AAGATGTGGTAAAAAGTGTATATAGCCAATTAGGTGACAATGAGAAAAACATTTTGTTGGACATTGCTTGTTTGTTCAGG
GGAGAAAATATCAACTATGTGATCCAAATGCTTGAAGGGTGTCGTTACTTTCCACGCATTGGAATAACTATTCTTGTGGA
AAAATGGCTGGTGACTATATCTGAAAATACAGTGCAAATGACTAATCTGATTCAAGACATCTGCCGAGAAATCCTCAATG
GAGAAACTGAAAGTTGCACCAGAATGTGGGAACCTCGAAGAATCAGATATCTACTAGAAGATGATGATCTTAAAGCGGGT
GCAGAATCAAGTGCAACGCCTAAATATGGTTTGGTCAGTGAAGACATAGAAAGCATATTTCTGGACACATCGAATTTGAT
TTATGATGTCAAACGTGAGGCCTTCAAGAATATGTTTAATCTCAGATTCCTAAAGATATACAATTCTTGCTCTAAATATG
GTCATGGACTTAACTTTCCTAATGGACTTGATTCTCTGCCTTGTGGACTAAGGCTCCTCCACTGGGAGAACTATCCTTTG
AAATCTTTGCCTCAAGATTTTGAGCTTGACAACCTTGTTGAACTTTGTATGCCTTACAGTAAGCTCCAGACACTTGGAGC
AGGAACCAAGTTCCTTGAGATGTTGAAGAGGATCAGGCTTTGTCACTCCAAAGAGCTAGTTGAATTTGATGTACTTTTAG
TTGCTCGAAATATCGAGCTAATTGATCTCCAAGGTTGTACAAGATTGCAAAGTTTTCCTGACACGAGTGAACTGCAACAT
CTCCGAGTTATAAATCTCTCAGGATGCACAGAGATCAAAAGTTTCCAAGGAGCTCCACAAAATATTGAGGAACTACATCT
TCAAGGAACTAGTATAAGGGAGATACCAATATCCACTGTGAGCCACTCTCCCCAAAAAGTTAAGCTTGACAGGAAAAAAC
TTCTGAATCTTCTAGAAAACTTTGAGGATGTTGAGCATATTGACTTGGAGAGTGTAACGGATCTAACTAAAGTAAGTTCA
TGTAATCAAGGTTTTGGCAAGCTTGTCCACTTGAACATGAAAGATTGTTCTCACATTCGAAGTCTTCCTGACATGGCCAA
TGTATTAGAATCTCTCCAAGTTCTACATCTGTCTGGTTGCTCAGAGCTCAAGGAAATTAAGGGTTTCCCAAGAAACATGA
GGAAGTTATATATTGGTGGAACCGCCATACGAGAGGTGCCACAACTTCCAAATAGTTTAGAGTTCTTGAATGCTCATGGG
TGTACGCATCTTAAGTCGATTTGCTTGAACTTTGAGCAGCTTCCTAGACACTACACCTTCAGTAACTGTTTCAATTTTTC
TTCACAATTGATCTCTGAGTTCTTAGAGAAATGTCTGACTAGAGTAGCAAGTATAGCAAGAGAACACCAACAGGAACTCA
CCAGAGAACCTGAAGTCAGCATCTGTATTCCTTCAGACGCACGTCAGAGATTCGCCTTTCTCTTGCAACCAGGTCCAGAT
GTAATGATAGATTCACCTTGGACGCGGAAACCTCTCTCTGGACTTGCTATATCAGTTGTGGTATCGTTTCAGGATGATTG
CCAAAATGTGGCAGGACTAGGGATTAGGTGCATATGCACATGGCAGACCAGGAACGGGTACTTGGGTAGAATGGAGAGAC
TGTTTCAGTGTTGGGCTCCTTTGGAAGCTCCAAAAGTTCAACGTGACCACGTATTTTTCTTCTATGAAACCGATATGCAT
ACCAATGGTAGTGAAGAGAACCCTAACTTGTGGGTCAAGTTTGAGTTCCATGCAGTGAGTTGGGAAAACAAGCTTTTAGG
TGATAAATGCATGGTGATCCAATGTGGTGTCAGGGTGATTACGGCTCCAGGAAATGATACAAATACCATACCTAGTGAAA
TCACAATTGGAAGTGAAGCTACAAGTGTAGTTGATGGGGACCATCCTCCAACATCTTCCAGAATAGTGCTAGAGGCAAAC
AGCCCTACTCCTCTTCCATCCAAAGAGAGACGTAAGGTTTCGAGAGCACAGAGTACGTTAAGATCTAATCTATGGAAGTG
GATGAGGACAATTTAA |
AA seq | Len:992 aa
MQVMVPVFYDVDPLTRVYGWANRWLEAGYITMHQSRISSSKILTDSELVEDVIKDVYEKLHRTERVGIYSKVLEIENLLY
KQPWDVRSIGIWGMPGIGKTTLAKAVFNHMSSDYDVSCFIENFDEAFHKEGLHRLLEKKIGKLLKEVFDIKGSYIMRPSL
QRDKLCNKRILVVLDDVRDSLAGESFLRRLDWLGPGSLIIMTSTNKKVFAYCDIYQVYEVHGLNEHEALQLFFQNAFEKD
VPEQIDREISRNVIEYANGNPLALRIYGQELKGKMSEMEDAFLKLKQHPPQKIQDVVKSVYSQLGDNEKNILLDIACLFR
GENINYVIQMLEGCRYFPRIGITILVEKWLVTISENTVQMTNLIQDICREILNGETESCTRMWEPRRIRYLLEDDDLKAG
AESSATPKYGLVSEDIESIFLDTSNLIYDVKREAFKNMFNLRFLKIYNSCSKYGHGLNFPNGLDSLPCGLRLLHWENYPL
KSLPQDFELDNLVELCMPYSKLQTLGAGTKFLEMLKRIRLCHSKELVEFDVLLVARNIELIDLQGCTRLQSFPDTSELQH
LRVINLSGCTEIKSFQGAPQNIEELHLQGTSIREIPISTVSHSPQKVKLDRKKLLNLLENFEDVEHIDLESVTDLTKVSS
CNQGFGKLVHLNMKDCSHIRSLPDMANVLESLQVLHLSGCSELKEIKGFPRNMRKLYIGGTAIREVPQLPNSLEFLNAHG
CTHLKSICLNFEQLPRHYTFSNCFNFSSQLISEFLEKCLTRVASIAREHQQELTREPEVSICIPSDARQRFAFLLQPGPD
VMIDSPWTRKPLSGLAISVVVSFQDDCQNVAGLGIRCICTWQTRNGYLGRMERLFQCWAPLEAPKVQRDHVFFFYETDMH
TNGSEENPNLWVKFEFHAVSWENKLLGDKCMVIQCGVRVITAPGNDTNTIPSEITIGSEATSVVDGDHPPTSSRIVLEAN
SPTPLPSKERRKVSRAQSTLRSNLWKWMRTI* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0006952 |
Pfam | Leucine Rich Repeat |
KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |
---|