Names & Information

Knowledge of BnaC02G0084600ZS:

Gene Name
BnaC02G0084600ZS
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
BnaC02g07600D [Brassica napus]
Best Hit (SwissProt)
Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
NT seq
Len:2976 nt

ATGCAAGTGATGGTCCCAGTGTTCTACGACGTTGATCCATTAACCCGAGTTTACGGGTGGGCCAATAGATGGCTGGAGGC
TGGATACATAACAATGCACCAATCAAGGATCTCAAGCAGTAAGATACTCACCGATTCCGAACTAGTGGAAGACGTCATCA
AAGATGTTTATGAAAAGCTCCATCGAACAGAACGAGTTGGAATTTACTCGAAGGTTTTGGAGATTGAAAACTTGCTTTAC
AAACAACCGTGGGACGTCCGAAGCATAGGTATCTGGGGTATGCCTGGCATAGGCAAGACGACACTTGCTAAAGCAGTCTT
TAACCACATGTCCTCTGATTATGATGTTTCTTGTTTTATCGAAAACTTTGATGAAGCGTTTCATAAAGAAGGACTTCACC
GTTTGCTTGAAAAAAAAATTGGTAAACTTCTAAAGGAAGTGTTTGACATAAAGGGTTCTTACATTATGAGACCGAGCCTC
CAAAGAGACAAACTATGCAATAAAAGGATTCTTGTTGTCCTGGATGATGTGCGTGATTCTCTGGCTGGCGAGTCCTTCCT
TAGAAGGCTTGATTGGCTTGGTCCTGGAAGCCTGATAATCATGACCTCTACTAATAAAAAAGTGTTTGCATATTGTGATA
TTTACCAAGTATATGAAGTTCATGGTTTAAACGAGCACGAGGCTCTCCAGTTATTCTTCCAAAACGCCTTTGAAAAAGAC
GTGCCAGAGCAAATCGACAGAGAAATATCAAGGAACGTTATCGAATATGCCAATGGAAACCCTTTGGCCCTCCGCATTTA
TGGTCAAGAGCTTAAGGGGAAGATGTCTGAAATGGAGGATGCATTCCTCAAACTCAAGCAACATCCTCCTCAAAAGATTC
AAGATGTGGTAAAAAGTGTATATAGCCAATTAGGTGACAATGAGAAAAACATTTTGTTGGACATTGCTTGTTTGTTCAGG
GGAGAAAATATCAACTATGTGATCCAAATGCTTGAAGGGTGTCGTTACTTTCCACGCATTGGAATAACTATTCTTGTGGA
AAAATGGCTGGTGACTATATCTGAAAATACAGTGCAAATGACTAATCTGATTCAAGACATCTGCCGAGAAATCCTCAATG
GAGAAACTGAAAGTTGCACCAGAATGTGGGAACCTCGAAGAATCAGATATCTACTAGAAGATGATGATCTTAAAGCGGGT
GCAGAATCAAGTGCAACGCCTAAATATGGTTTGGTCAGTGAAGACATAGAAAGCATATTTCTGGACACATCGAATTTGAT
TTATGATGTCAAACGTGAGGCCTTCAAGAATATGTTTAATCTCAGATTCCTAAAGATATACAATTCTTGCTCTAAATATG
GTCATGGACTTAACTTTCCTAATGGACTTGATTCTCTGCCTTGTGGACTAAGGCTCCTCCACTGGGAGAACTATCCTTTG
AAATCTTTGCCTCAAGATTTTGAGCTTGACAACCTTGTTGAACTTTGTATGCCTTACAGTAAGCTCCAGACACTTGGAGC
AGGAACCAAGTTCCTTGAGATGTTGAAGAGGATCAGGCTTTGTCACTCCAAAGAGCTAGTTGAATTTGATGTACTTTTAG
TTGCTCGAAATATCGAGCTAATTGATCTCCAAGGTTGTACAAGATTGCAAAGTTTTCCTGACACGAGTGAACTGCAACAT
CTCCGAGTTATAAATCTCTCAGGATGCACAGAGATCAAAAGTTTCCAAGGAGCTCCACAAAATATTGAGGAACTACATCT
TCAAGGAACTAGTATAAGGGAGATACCAATATCCACTGTGAGCCACTCTCCCCAAAAAGTTAAGCTTGACAGGAAAAAAC
TTCTGAATCTTCTAGAAAACTTTGAGGATGTTGAGCATATTGACTTGGAGAGTGTAACGGATCTAACTAAAGTAAGTTCA
TGTAATCAAGGTTTTGGCAAGCTTGTCCACTTGAACATGAAAGATTGTTCTCACATTCGAAGTCTTCCTGACATGGCCAA
TGTATTAGAATCTCTCCAAGTTCTACATCTGTCTGGTTGCTCAGAGCTCAAGGAAATTAAGGGTTTCCCAAGAAACATGA
GGAAGTTATATATTGGTGGAACCGCCATACGAGAGGTGCCACAACTTCCAAATAGTTTAGAGTTCTTGAATGCTCATGGG
TGTACGCATCTTAAGTCGATTTGCTTGAACTTTGAGCAGCTTCCTAGACACTACACCTTCAGTAACTGTTTCAATTTTTC
TTCACAATTGATCTCTGAGTTCTTAGAGAAATGTCTGACTAGAGTAGCAAGTATAGCAAGAGAACACCAACAGGAACTCA
CCAGAGAACCTGAAGTCAGCATCTGTATTCCTTCAGACGCACGTCAGAGATTCGCCTTTCTCTTGCAACCAGGTCCAGAT
GTAATGATAGATTCACCTTGGACGCGGAAACCTCTCTCTGGACTTGCTATATCAGTTGTGGTATCGTTTCAGGATGATTG
CCAAAATGTGGCAGGACTAGGGATTAGGTGCATATGCACATGGCAGACCAGGAACGGGTACTTGGGTAGAATGGAGAGAC
TGTTTCAGTGTTGGGCTCCTTTGGAAGCTCCAAAAGTTCAACGTGACCACGTATTTTTCTTCTATGAAACCGATATGCAT
ACCAATGGTAGTGAAGAGAACCCTAACTTGTGGGTCAAGTTTGAGTTCCATGCAGTGAGTTGGGAAAACAAGCTTTTAGG
TGATAAATGCATGGTGATCCAATGTGGTGTCAGGGTGATTACGGCTCCAGGAAATGATACAAATACCATACCTAGTGAAA
TCACAATTGGAAGTGAAGCTACAAGTGTAGTTGATGGGGACCATCCTCCAACATCTTCCAGAATAGTGCTAGAGGCAAAC
AGCCCTACTCCTCTTCCATCCAAAGAGAGACGTAAGGTTTCGAGAGCACAGAGTACGTTAAGATCTAATCTATGGAAGTG
GATGAGGACAATTTAA
AA seq
Len:992 aa

MQVMVPVFYDVDPLTRVYGWANRWLEAGYITMHQSRISSSKILTDSELVEDVIKDVYEKLHRTERVGIYSKVLEIENLLY
KQPWDVRSIGIWGMPGIGKTTLAKAVFNHMSSDYDVSCFIENFDEAFHKEGLHRLLEKKIGKLLKEVFDIKGSYIMRPSL
QRDKLCNKRILVVLDDVRDSLAGESFLRRLDWLGPGSLIIMTSTNKKVFAYCDIYQVYEVHGLNEHEALQLFFQNAFEKD
VPEQIDREISRNVIEYANGNPLALRIYGQELKGKMSEMEDAFLKLKQHPPQKIQDVVKSVYSQLGDNEKNILLDIACLFR
GENINYVIQMLEGCRYFPRIGITILVEKWLVTISENTVQMTNLIQDICREILNGETESCTRMWEPRRIRYLLEDDDLKAG
AESSATPKYGLVSEDIESIFLDTSNLIYDVKREAFKNMFNLRFLKIYNSCSKYGHGLNFPNGLDSLPCGLRLLHWENYPL
KSLPQDFELDNLVELCMPYSKLQTLGAGTKFLEMLKRIRLCHSKELVEFDVLLVARNIELIDLQGCTRLQSFPDTSELQH
LRVINLSGCTEIKSFQGAPQNIEELHLQGTSIREIPISTVSHSPQKVKLDRKKLLNLLENFEDVEHIDLESVTDLTKVSS
CNQGFGKLVHLNMKDCSHIRSLPDMANVLESLQVLHLSGCSELKEIKGFPRNMRKLYIGGTAIREVPQLPNSLEFLNAHG
CTHLKSICLNFEQLPRHYTFSNCFNFSSQLISEFLEKCLTRVASIAREHQQELTREPEVSICIPSDARQRFAFLLQPGPD
VMIDSPWTRKPLSGLAISVVVSFQDDCQNVAGLGIRCICTWQTRNGYLGRMERLFQCWAPLEAPKVQRDHVFFFYETDMH
TNGSEENPNLWVKFEFHAVSWENKLLGDKCMVIQCGVRVITAPGNDTNTIPSEITIGSEATSVVDGDHPPTSSRIVLEAN
SPTPLPSKERRKVSRAQSTLRSNLWKWMRTI*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0006952
Pfam
Leucine Rich Repeat
KEGG
hypothetical protein; K16225 probable WRKY transcription factor 52 (A)