Names & Information
Knowledge of BnaC02G0084800ZS:
| Gene Name | BnaC02G0084800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA02g03780D [Brassica napus] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
| NT seq | Len:5931 nt ATGGAGTGCAAGGAAGTTTCTGGACAAACAGTGATGCCGATTTTCTATGGTGTAGATCCAACTGATGTAAGAAAACAGTC TGGAGATTTCGGAAATTCTTTTGACAAGATTTGTCATGTGAGAACAGAGGAAGAGAGGCAAAGATGGAGGCAAGCTTTAA CCAATGTTGCTAGTATCGCCGGCGACTGTTCTTCAAAATGGGACAATGATGCGGTGATGATTGAAAGGATTGTCACCAAT GTTTTGCAAGAGCTGAATTGGTGTACACCCTCAAAGGATTTCAAAGATTTAGTTGGATTGGAAGCTCATGTCTCAAACTT GAACTCAATGTTATGCCTGGACACTAATGAAGTGAAGATAATAGGTATTTGGGGTCCAGCAGGAATCGGTAAGACCACCA TTGCGAGAGCTTTATACAATCAACTTTCTTCTAGTGGTGATGACTTTCAGTTGAATCTTTTCATGGAGAATGTTAAAGGA ATTCATAGGAGAAACGAACTCCATGGTTATAGTTTGAAGTTGCATTTACAAGAAAGGTTTATCTCTGAAATTTTCAACCA AAGAACTAAGATAAGCCATTTAGGCGTTGCACAAGAAAGGCTAAAAAATCAGAAAGCTTTGATTATTCTTGACGATGTTG ATGGATTAGAGCAACTAAATGCCTTAGTAGATAAAGCTGAATGGTTTGGCTACGGAACCATAATCGTTGTTACTACAGAA GATAGACAGCTTTTGAAGGCTCATGGGATCAATCATGTCTATGAAGTTGGTTATCCTTCTCAAGGTGAAGCCTTCAAGAT CTTGTGTAGATATGCTTTCGGAAAAAACTCGGCACCAAAAGGGTTCTATGATCTAGCTACTGAAGTTACTAAACTTGCTG GTGATCTACCATTAGGTCTCAGCGTTCTAGGTGCATCTTTGCGAGGGATGAGCAAAGAGGAGTGGATAAACGCGATACCA CGACTTAGAACTAGTCTAAATGGGAAAATAGAGAAGCTGTTAGTAGTATGCTATGATGGACTAGATGAGAAAGATAAGGC TCTCTTTCTTCATGTCGCGTGTTTGTTCAATGGTGAGAAGGTGGATCGTGTGAAGCAATTGCTTGCTAAGAGTGCATTGG ATGCAGAATATGGACTTAGAGTTCTTGTGGACAGATCTCTTATACATATCTATGCTGATGGATGTATAGTGATGCATTTT TTGCTACAACAAATAGGTAAAGAAATCATTCGAGGACAATGTATCAACGATCCTGGAAAACGTCAGTTCCTAGTCGATGC TCAGGAGATTTCGGATGTACTTGTAGATGAAACTGGTACAAAAGAGGTTTTAGGCATATCGTTAGATATGTCCGAACTCG ATGATGAAGTGTATATAAGTGAAAAAGCCTTCAAGAAAATGACTAATCTCCAATTCTTGAGGCTATACAATCATTTTCCA GATGAAGCAGTCAAGTTGCACTTACCTCACGGCTTGGATTATCTACCACGTAAACTAAGGTTACTACGTTGGGATTCATA TCCGATAAAATATATGCCCTCTAAGTTTCGTCCTGAATACCTTGTCGAACTTACTCTGCGAGATAGCAAGCTTGAAAAGT TTTGGGAAGGTGCTCAGCCACTGCCGGGTCTAAGGCATATGGATTTGAGTTCTTCCAAAAAAATTAAAGACATTCCGAAT CTCTCAGGAGCAACAAATTTGGAGAAATTGTATCTTAGGTTCTGCGAAAACTTGGTCACAACAGTTTCTTCCTCTTCTCT GCAAAACCTTAATAAGCTCAAAGTCTTGGACATGTCTTGTTGCATAAAACTGAAGGCTCTTCCGACCAATATCAACTTGG AATCCCTCAGTGTCCTTAACCTGAGGGGATGCTCGAAGTTGAAGAGGTTTCCGTGTATTTCAACGCAGGTTCAGTTCATG TCTCTTGGGGAAACTGCGATAGAGCAAATGCCTTCATTAATCAGCTATTGTTCTCGTCTAGTTTCATTGGAAATGGCGGG ATGTAAGAATCTTAAAACATTACCACCTGTCCCTGCGAATTGCAACTCTCTTCATCCTCTCATCGCTGCTTCTTCTCCTT CCTCTTCATCATCATCAACACGTCAATACAGCTACGACGTCTTCCCAAGTTTCTGTGGTCAAGATGTCCGGAGAAGCTTT CTCAGCCACTTTCTTGAAGGGTTGAAAACCAATGGAGTAAACACGTTCGTAGACGACGGGATCATGATGAGCGGATCAAT AAACTCCGAGCTCGTGAGAGCTATCAGAGAATCAAGGGTTGCCGTTGTGATCCTCTCGAAGAACTATGCCTCTTCGAGTT GGAGTCTACACGAGTTGCAGCTGATCATCGAATGCAGGGCTTCTTTAGGACAAACTGTGATGACAATCTTCTACGATGTG GAACCTTCTGATGTTAGAAAACAGACAGGAGATTTTGGAAGGGCCTTCGAGGAAACTTGTAATGGCAGTACAGAGGAAGA GAAGAAGACATGGAGACAAGCGTTGACTCAAGTTGCTCTTATTGCTGGGGAACATTTAACTTCATGGGCTAGTGAATCAC AGATGATCTCGAAAATCGTCAAAGATGTTTTTAACGAATTGCCATCAACGGACTTTGATCGGTTAGTTGGAGTTGAAGCT CATGTAGCAAAGCTGAAATCGATGATACGCTTAGAATGCGACGAGGTGAAGATGGTTGGCATCTGGGGCCCTGCAGGGCT CATAGCTAAAGCCTTATACAACCAAGTTTCCAGTAACTTCCAACTCAAGTTTTATAAGGAGATCTTTAAGGGAAAGTATG AGGTGCACAACCTCGAAAGATATGATTTGCAAAATCGTTTGAAGAAAGAGTTACTATCTGGAGTTTTAGATCATAGGGAC ATGAAGATACCTGACCTAGGTGAGGCAGAAGGGAGGTTAAAGCATCAGAGAGTCCTACTCATTCTTGATGATGTCTTTCT TCATGATCTAAAGGGTTTGAGAGATGTAATCCAAGGTCTTAGGTATGGAAGTAAGGTAATTGTGACCAGTGAAGATATAG ATACGTTAAGAGAATGTGGGATCCACCAGAACCAGACATACAGAGTTGCTTTTCCATCAAGCGAAGAGGCTCTTCAGATA ATTTCATACTCTGCATTTGGACAACGCTTTCCACCAAGAAGTTATCTGGAGCATGCAGATGAAGTAGCTAAGCTTGTCTC TCCATTTCCACTTGGTCTCAGAGTCATTGGTTCTTCTTTGCGTGGAAAAAGCAAAGATGAGTGGATAACTGCACTGGCTA AGCTCAAAACTTGTCATGGGGACAAGGATGTAGAAACAGCCATTAGATTTGCCTATGAAGGGTTATCTGATAAACAAAAA ACTCTACTTTATCTATTGACAGATTCAATAAGTTCGGGTGAGAACGTGAACAATGCCATATTCTCACTTTCACAGAGTGA TTGGGATGCTGAGAAAGGGATTCAAACTCTAGCTGATATAGCTTTCATCACTATATCCGGTGAAGGAAGAATTCTGATGC ACTATTTGGTACGCTTAGTGTCTATCAATTCTAATTTTTTTCTTCTTTTGTTATTGGCAGAATCAATGGCTGAACCAGAT AAAACGGCAGGGAGCTCACGTCATGAAAAGCGTAAAGAAGCTCGCTTGCAGAAGAGCCAGAAGAAGCATGAGTCTTGGCT TCAGCGTCAGAAGTTGCAAAAGGAGAAACGAGTATCATCATCAGTCCAGACAAAGACTGATGACGTGATCAAGTCTGAAA CTTATAAAGAAACTGAACATGTGAAATCAGTTAGTCCTGGTGGAAACAAGGATGGTAAAAAGTCTTTTACACAAAAGAAA GACGAGGCTAGAGTCAAACCAAAGGAGAAGAAGATGCAAAGAGGACACAAAACGAAAGATCTAAAGAAGCCAAGGAAGAA GACGAAGTTCGAAGAGTATCTTGAGATGGAGACACAAAGTGCTTCACTATCTCGTGAGCAGGATGTCGAACTTGAGAGGA AGCTCGCAAAGAAACTCAAGGTAAAGAACGGGAAACTAAGAGGCGTGGATGACGGTATGAATGAACTGTTCGAAGGGCTC CCATCTGTGTTGGATTCTATGGGTTCTGAACTTGGTGATTCTCGTAAGAAGAAGGGTAAGAGAAAGAGATCCGAGGAAAA ACGGGACTATGGGGAAGATTTTGAGCTTGGAGAATCTGATTTTTCTGATGAGGATAGTGAAGAAGAGCCTAAAAGAAAAA GAGACCGTAAACACGGTAAGAAGAAGAAGACTTTAGATGAAGAGCTAGAAGAAACTCATCCAATGGAGATCACAGATGAT GGTGAGTCAGAGACTGTTGACTATCAAGATTCACCTTCAAGTTTGGAGAAAGTAGAATCTCCTCTGCTGAAGCCTAATCC TGAGAGCGGCGTCAAGTATGTTGCTCCTCATTTGAGATCTCAGACCAGAAGTGAATCTGAGGAACAAGCTAAATTACGTA CACGTGTAAAAGGTCTTCTAAATAAGATGGCTGAATCCAATGTAGAAACAATAACCGCAGAACTCTCCACACTCTATCGC GGTGTTGCAAGAAGTGTGTCCTCTCAGATTTTCTGTGAAGAGGTTTTGGCAACTTATGCCAGAGGCAATGAACAGTACGC TGTATTTGCTGCTTTTATAGCTGGCATGGCTTGTCAAGTTGGAATGGATTTCAGTGCACAGCTTCTTGCTTCACTTGCTA AATCTTTCGAGGATGAATACCAGAAAGAAGACAGTCTCTCTTTGAATGGAATCACTCTTTTACTTTCTTATCTCTGCTTA TTGGGAGTTTGCTCCAGTGATCTTATTTATGATTTCTTAATGACATTGGCGAACCGGCTTACTGAAGTTGATGCCTCCAC TATCTTAACTGTTTTAGATAGCTGTGGAATGAAGATAAGAAGTGATGATCCTGTGGCTATGAAAACCTTCATCATAAGCA TCCAGAACAAGACAAATGAAATTAAAACCTCCCCTGATTGCAAGACTGATATAAATAAGTTCACGATGGAAAAAATGCTT GAAACCATTGCTGCAATCAAGAACAACAAGTTGAGAGCCAAAGAGGATTCTGTCCAGAACACAAGGGTCAAGAAGTGGCT TCAAAAGTTGAGAGTGGAAGAAGTACTATTAAGAGGGCTAACATGGAGCAAGCTGCTTGACACCGAGAAGAAGGGTCAGT GGTGGTTATCTGGAGATCTAGTTGTTAAAACAAACCACGCAGAAGACGTAGCGCAAACAATGGACGCTGAGGTTGTTGAG GCCCAGAAAATGTTGAAGCTAGCTGATGCGCAGAGGATGAACACAGACTCCAGAAAAGCTATATTCTGCGTGATCATGAG TAGTGAAGACTACATTGATGCGTTTGAGAAGCTTCTTAGATTGGATCTGCCAGGAAAGCAGGACAGAGAGATCATGAGGG TTCTAGTTGAATGCTGTTTACAGGAGAAAGTGTTTAACAAGTACTACACTGTCCTCGCTTTAAAGCTGTGTGAGCACGAC AAGAATCATAAGTTCACATTACAGTATTGCATCTGGGACCATTTCAAGGAACTCGAGACAATGTCACTTCAGAGATCAAT GCATCTAGCGAAATTTGTGGCGGAGATGATTGTATCCTTCAATCTTTCTCTTGCGGTTCTCAAGTGTGTAGACTTGGCGA ATCCAGTGCAGTTAACTCCGAAGAGAATCATGCACTTTCGAATGCTGTTCGAGGCCATCTTCGAGCACACTGAGAAACTT GTGTGGAACTTGTTCACTCGCATAGCTGTGAATCCGGACTATGAAGCTCTAAGGGATGGCATCAAGTTTTTCATGAAGGA ATATGTTGTGAAAGCTAATAAGACGATCTATGGGAAGTTCAGGAAAGCGAAAGAAGCTCTTAACAATTCAGATGGATCGC TGCTCATGTGA |
| AA seq | Len:1977 aa MECKEVSGQTVMPIFYGVDPTDVRKQSGDFGNSFDKICHVRTEEERQRWRQALTNVASIAGDCSSKWDNDAVMIERIVTN VLQELNWCTPSKDFKDLVGLEAHVSNLNSMLCLDTNEVKIIGIWGPAGIGKTTIARALYNQLSSSGDDFQLNLFMENVKG IHRRNELHGYSLKLHLQERFISEIFNQRTKISHLGVAQERLKNQKALIILDDVDGLEQLNALVDKAEWFGYGTIIVVTTE DRQLLKAHGINHVYEVGYPSQGEAFKILCRYAFGKNSAPKGFYDLATEVTKLAGDLPLGLSVLGASLRGMSKEEWINAIP RLRTSLNGKIEKLLVVCYDGLDEKDKALFLHVACLFNGEKVDRVKQLLAKSALDAEYGLRVLVDRSLIHIYADGCIVMHF LLQQIGKEIIRGQCINDPGKRQFLVDAQEISDVLVDETGTKEVLGISLDMSELDDEVYISEKAFKKMTNLQFLRLYNHFP DEAVKLHLPHGLDYLPRKLRLLRWDSYPIKYMPSKFRPEYLVELTLRDSKLEKFWEGAQPLPGLRHMDLSSSKKIKDIPN LSGATNLEKLYLRFCENLVTTVSSSSLQNLNKLKVLDMSCCIKLKALPTNINLESLSVLNLRGCSKLKRFPCISTQVQFM SLGETAIEQMPSLISYCSRLVSLEMAGCKNLKTLPPVPANCNSLHPLIAASSPSSSSSSTRQYSYDVFPSFCGQDVRRSF LSHFLEGLKTNGVNTFVDDGIMMSGSINSELVRAIRESRVAVVILSKNYASSSWSLHELQLIIECRASLGQTVMTIFYDV EPSDVRKQTGDFGRAFEETCNGSTEEEKKTWRQALTQVALIAGEHLTSWASESQMISKIVKDVFNELPSTDFDRLVGVEA HVAKLKSMIRLECDEVKMVGIWGPAGLIAKALYNQVSSNFQLKFYKEIFKGKYEVHNLERYDLQNRLKKELLSGVLDHRD MKIPDLGEAEGRLKHQRVLLILDDVFLHDLKGLRDVIQGLRYGSKVIVTSEDIDTLRECGIHQNQTYRVAFPSSEEALQI ISYSAFGQRFPPRSYLEHADEVAKLVSPFPLGLRVIGSSLRGKSKDEWITALAKLKTCHGDKDVETAIRFAYEGLSDKQK TLLYLLTDSISSGENVNNAIFSLSQSDWDAEKGIQTLADIAFITISGEGRILMHYLVRLVSINSNFFLLLLLAESMAEPD KTAGSSRHEKRKEARLQKSQKKHESWLQRQKLQKEKRVSSSVQTKTDDVIKSETYKETEHVKSVSPGGNKDGKKSFTQKK DEARVKPKEKKMQRGHKTKDLKKPRKKTKFEEYLEMETQSASLSREQDVELERKLAKKLKVKNGKLRGVDDGMNELFEGL PSVLDSMGSELGDSRKKKGKRKRSEEKRDYGEDFELGESDFSDEDSEEEPKRKRDRKHGKKKKTLDEELEETHPMEITDD GESETVDYQDSPSSLEKVESPLLKPNPESGVKYVAPHLRSQTRSESEEQAKLRTRVKGLLNKMAESNVETITAELSTLYR GVARSVSSQIFCEEVLATYARGNEQYAVFAAFIAGMACQVGMDFSAQLLASLAKSFEDEYQKEDSLSLNGITLLLSYLCL LGVCSSDLIYDFLMTLANRLTEVDASTILTVLDSCGMKIRSDDPVAMKTFIISIQNKTNEIKTSPDCKTDINKFTMEKML ETIAAIKNNKLRAKEDSVQNTRVKKWLQKLRVEEVLLRGLTWSKLLDTEKKGQWWLSGDLVVKTNHAEDVAQTMDAEVVE AQKMLKLADAQRMNTDSRKAIFCVIMSSEDYIDAFEKLLRLDLPGKQDREIMRVLVECCLQEKVFNKYYTVLALKLCEHD KNHKFTLQYCIWDHFKELETMSLQRSMHLAKFVAEMIVSFNLSLAVLKCVDLANPVQLTPKRIMHFRMLFEAIFEHTEKL VWNLFTRIAVNPDYEALRDGIKFFMKEYVVKANKTIYGKFRKAKEALNNSDGSLLM* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | nucleolar MIF4G domain-containing protein 1-like; K17583 nucleolar MIF4G domain-containing protein 1 (A) |