Names & Information
Knowledge of BnaC02G0085000ZS:
| Gene Name | BnaC02G0085000ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC02g07660D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:2694 nt ATGGATTCTTCTTCTTCTTCGTCATCGTCATCAACTCGTCACTACAACTACGATGTCTTCCCAAGCTTCTCCGGTCAAGA TGTCCGCAGAACTTTTCTCAGCCACTTTTTTGAAGCTTTGAAAAGCAAGGGAATCAAAACGTTCATAGATAATGGGATCA TAAGAAGTGAGTCTATTAACTTTGAGCTCATAAGAGCTATTAGGGAATCAAGGATTGCTGTCGTGATCCTATCTAAGAAC TATGCTTCTTCGAGCTGGTGTCTGAACGAGTTGCAGCTGATCATGGAGTGCAAGGTTTCTTTAGGACAAACTGTGATGAC AATCTTTTACGATGTGGAGCCATCTGATGTGAGAAAGCAGACTTTAGATTTTGGAAAGGCCTTTAAAGAAACTTGTTATG GGAAGACAGAGGAAAAGAAGAAGAAATGGACAGAAGCTTTATCTCAAGTTGCAGTTATTGCCGGAGAACATTCTGTTTCA TGGGCTAGCGAGGCTGAGATGATCTCAAGAATAGTCACGGATATTTCTAACGAGTTGCCATCAACGGATTTCAATCAGCT AGTTGGAATTGAAGCTCATGTAGCAAATTTGATATCGATGATATGCTTAGAATCCGACGAGGTGAAGATTGTGGGGATCT GGGGTCCTGAGGGCATTGGCAAAACCACTATAGCTAGAGCTTTATACAATCACATTTCCAGCAACTTCCAACTTAAGTTT TATAGTGAGATAGTTCAGAAGGCTGACATGACGGGATTGCAAAACGAATTGCTATCTGGAATATTAGATCATAGAGACAT GAAGATACCTAACGTGCAAGAGGCGCAATATAGGTTAATGCACCAGAGGGTCCTTCTGGTTCTTGATAATGTCAGTACCG TAGAGTTACATGCTTTGCGGAATCTATTTCAGGATCTAAAATTCGGAAGTAAGGTGATTGTGGCGAATGAAAATATAGGA ACATTTACGTACAACCGGATCGAGCAGATATACAAAGTTGCTTATCCATCGAGCGAAGAGGCTCTACAGATCTTCTCATA CTCTGCGTTTGGCCAAAGCTCTCCTCCCAGAGGATACGTGAAGCATGCTGCTGAAGTATCTAAGCTTATCGCACCTTTTC CACTTAGTCTCAAGGTCTTGGGTTCGGCTTTACGTGGGAAGAGCAAAGAGGAGTGGACAGTGGCACCGGATAAATTCAAA ACCTATGTTGACGACAGGGATGTTGAGAAAGCAATTAGATTCGCGGTCGATGGCTTGTCCAAGAAACAGAAAAGTTTGTT TTATTCATTAAGTTCGTCTCAATTCCGGGGTAAGAAGAACCTGAAAGACGCCATATACTTTCTAGCCGGGATAGACGACT GGGACGTGGAGAAAGGAATACAAACCCTAGCTGACATGGCTCTCATCTCTATATCTAGTGAAGGGGAAATCACGATGCAC CATTTGAAAAAACCTACTACTATAGATGGATCCAACTACTTTCTCGGCCCAGTCAAGAACCAATACTATGTCCTTGTCGT CCACCCCAACCAAAACCCTAAATCCAGCTGCTTCGTATGCGGGAAACAAAAACACTACACCGATCCAGGTTTCCATTACC ATTGCACCATCTGCCATGTGGATTTCCACAGTTACTGTTTCAAATTGCCTAGAAAAATATCACATCCTTTTCACCTCCAA CACCCTCTCTTTATCACCTTTGGAAAGCATGAAAACATCTTCGACGGCAGCAATATTATAACGGATGAAATAGGCTCCGG AGATGCCATTCTCAACCCTATCTTCAGCACATTGGATCCTGGTGATGGTTTGATAGAACATTTTGGTCATGAACATCATT TAAAGCTCGAGAAGTATGATAGTATACGAGATGCAAAGAAGCAATGTCAAGCGTGCGTCCTTCCTATCGTCTTGCATGAT TTCTACAATTGTATACAATGTGATTATTTTCTCCACATAGTGTGTGCTGGTCTACCAAGGAAACTGGATCATGCATTGCA TAATCATTCTATTTTCCTCGACCCATTTCCTCCACCCAACGATAGTGACTTTAACCACCTACAATGTTCAGCTTGTTCTC GGACATCCAGTGGTTTCAAGTACAAGTGCTACGAAAAGGATTGCAAGATTCATTGGTTTAAGATAGATGTGACCTGCTGT CTAGTTCCTGAGTACAGCACCCAAAAATTCCATGAACATCCCATATTCATCGCCCCATACAATTACGACCATGAAATATA TCCTTGCAATGGTTGTAAGAGACATCTTACGAAGACTCGTCTACAGTGTACTCTCTGCGAATTTTCTATTTGCTATGAAT GCGCTACCATCCCCGAAGAGTTGCACTATAAACACGATGAACATCCTCTCACTCTTTGCTATGGAGAAGACACGGATGGA AAGTATTGGTGCGAAGAATGTGAGAAGCAAGTGAATCCGTCGGAATGGTTCTACACGTGCAAGAAATGTTGCATCACTAT CCATAGGACTTGCCTATTCGGATTCTACGTTTATCTGAAGCCTGGTCACACATTAACATACAATCGTGCTACCACGGTGG AAGTTCTTGGGAATAGTAGTAGTACTCGACCTATTTGCAGTCGGTGTGAGGAACGTTGTCGTGGCTTCACTTACTTCAAA GTCGACTTGAAGACTCTTTGTTCTTGGTGTGTTTTTGCACCCCCTAAAAGATAA |
| AA seq | Len:898 aa MDSSSSSSSSSTRHYNYDVFPSFSGQDVRRTFLSHFFEALKSKGIKTFIDNGIIRSESINFELIRAIRESRIAVVILSKN YASSSWCLNELQLIMECKVSLGQTVMTIFYDVEPSDVRKQTLDFGKAFKETCYGKTEEKKKKWTEALSQVAVIAGEHSVS WASEAEMISRIVTDISNELPSTDFNQLVGIEAHVANLISMICLESDEVKIVGIWGPEGIGKTTIARALYNHISSNFQLKF YSEIVQKADMTGLQNELLSGILDHRDMKIPNVQEAQYRLMHQRVLLVLDNVSTVELHALRNLFQDLKFGSKVIVANENIG TFTYNRIEQIYKVAYPSSEEALQIFSYSAFGQSSPPRGYVKHAAEVSKLIAPFPLSLKVLGSALRGKSKEEWTVAPDKFK TYVDDRDVEKAIRFAVDGLSKKQKSLFYSLSSSQFRGKKNLKDAIYFLAGIDDWDVEKGIQTLADMALISISSEGEITMH HLKKPTTIDGSNYFLGPVKNQYYVLVVHPNQNPKSSCFVCGKQKHYTDPGFHYHCTICHVDFHSYCFKLPRKISHPFHLQ HPLFITFGKHENIFDGSNIITDEIGSGDAILNPIFSTLDPGDGLIEHFGHEHHLKLEKYDSIRDAKKQCQACVLPIVLHD FYNCIQCDYFLHIVCAGLPRKLDHALHNHSIFLDPFPPPNDSDFNHLQCSACSRTSSGFKYKCYEKDCKIHWFKIDVTCC LVPEYSTQKFHEHPIFIAPYNYDHEIYPCNGCKRHLTKTRLQCTLCEFSICYECATIPEELHYKHDEHPLTLCYGEDTDG KYWCEECEKQVNPSEWFYTCKKCCITIHRTCLFGFYVYLKPGHTLTYNRATTVEVLGNSSSTRPICSRCEERCRGFTYFK VDLKTLCSWCVFAPPKR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | C1 domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |