Names & Information
Knowledge of BnaC02G0214700ZS:
| Gene Name | BnaC02G0214700ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaAnng20930D [Brassica napus] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
| NT seq | Len:2937 nt ATGGCTTCTTATTGTTCTTCGTCTGGCTCTAGCTGTTGGAGATATGACGTCTTTCCCAGCTTCCGAGGAGAAGATGTCCG CGGAAATTTCCTCAGCCACTTGGTCAAAGAGTTTGAAAACAAGGGAATAATTACATTCAAAGATGATCTAATCGAAAGAA GCCATACAATCAGCCTGGAGATCATAGAAGCCATAAGAACATCTAAATTTTTTGTGGTGTTATTCTCAGAGAACTATGCT TCTTCTAGTTGGTGTCTGGATGAGTTGGTTGAGATATTAAAGTGCAAGGAAGAAAAGAGGCTAGAACTGCTACCAATTTT CTACAAAGTGAATCCAGCTGATGTAAGAAACCAGACTGGGCAATTTGGGGGTGGCTACCGAGAAACTTGTCAAGGGAAGG ATAGTGAGAAACAAACTAAATGGAAGGCAGCCTTGATCAAAGCGGCAAATGTTGCTGGAGAGGCTTCTTATAACTGGTTA GTTGAAGCAGATTTTATCACAAAAATCGCAAGAGATATATCGGCCAAACTCAATGCTACGCCATCAAAGGATTTTGAAAA CGTAACTGGAATTGAATCCCATATGAGAAAGATGTTTCCACTTTTATGTTTAGAAGATAATGAAGTTAGGATGGTAGGGA TTTGGGGTCCTCCAGGTATAGGTAAGACCACCATTGCCAGGGTGTTACACAGTCGCCTTTCTAGTGAATTCCGCTTTACG GTTCTTATGGAGAACGTTAGGGGAAACTATCAAAGAACTATTGACAGTGGCGAATACAACTTACAAGTACGTTTACAAAC AGAGCTTTTGTCCAAAATATTTAACCAAAAAGATTTGAGGGTTAATCATTTAGGGACAATAGAAGAAAGGCTAAAGAGAC AAAAAGTCCTCATTGTTCTTGATGATGTGAATAAGGTAGAGCAGTTAGAAGCCTTGGCTAACGAGATACATTGGTTTGGT CCTGGAAGTAGGATTATCATTACCACTGAAGATAAACAGATATTGGTAGGGCATGGAATCAACCATATATACGAGGTTAA ATTGCCATGCAGAAAAACAGCAGTTGAGATCTTATGCATCTATGCTTTCAAACAAAGTGCACCACCAGAAGGTTTCATGG ACGTGGTGGTTGAAGTAGCAGAGATCTCTGGTCATCTTCCTTTGGGTCTCCGTGTCTTAGGTTCTCATATGCGCGGAAAG AACAAGGATCGGTGGAAACTTGAACTAAGAAGACTCACAACTAGTCTTCATGAAAAGGTGGAGAAAATGCTAAAAATTAG CTATGATGAGTTACATGTTAGAGATAAAGCTCTGTTCCTTCACATTGCATGTATGTTCAATGGTGAGAATATTGATCTAG TGACGCAACTACTTGTCAATAGTGACTTAGATGTGAGTCTTGGGCTCCAAGTCTTGCTTGATAAATCTCTCATTCAAATA ACTGCTGATAGAGAAATAGTAATGCACAATTTGTTACAAAAACTGGGAAGAGAAGTCGTTAAGCAGCAATCAAGCGACCC TGGAAAGCGTCAGTTCTTGTTCAATACAAAGGAGACTTGTAACATACTTGGGAATAATACAGGGTCAGGAAAAATACTTG GTATATCATTAGATATATCCGAGATCCAAAATGATCTCTCCCTGAGTGAGAGAGTCTTTGAAGACATGCGCAACCTCATG TTCCTAAGATTCTACGACAAGACAATTGATGAAAAAACAAGTTTGAAACTGCACCTACCTCGGGGGCTAAACTACTTGCC TACTCTAAGTTTATTACATTGGGTTGCATATCCAATGAAGTATATTCCTTCTCAGTTTCGTCCAGAAAGTCTTGTGGAAC TCCGCATGATGCATAGCCAAGTGGAGAAGCTTTGGGAAGGCACCCAGACCCTTGCATACCTCAAGACGATAGATTTGAGC TTCTCCAAGAACTTGAAAGAAGTTCCTGATCTTTCAAAGGCTATAAGTCTTGAGACACTGTGTCTCCAAGGTTGCGAAAG CTTGGTGGACCTTCCTTCCTCTGTCTTATATCTTCAGAAACTAAAATGGTTAAGGACGACTATGTGTGCAAAGCTAAAAG TTGTACCACCTAACATCAATCTGGCATCTCTGGAGGTTGTTGACATGGAAGGATGTTCACAGTTGAAAACTTTTCCGGAT ATCTCAAAGAACATCGAGACAACCTTTATGGGAAACACAGGGATAGAAGAAATACCTCCATCAGTTGGTCAATGGTCTCG CCTCGAATCGCTTGATATAAACAGCTGTAGAAACCTCAAAATGTTTTCACATCTTCCCAAGACTTTAGTATATCTATACC TAACTGGTAGTGGTATTGAAATGATCCCAGATTGCATCAAAGATCTTCAGTGGCTGTACTACTTATACCTCGATGGTTGC AAAAGACTTGTATCACTGCCGGAGCTTCCAGGTTCAATTAAGATTCTCTCAGCAAACAATTGTAAATCACTTGAGAAAAT ATCTTCATCTTTCAACAGTCCAAAAGCAAGAGTAGAATTTAGCAAATGTTTGAGTCTAGATGGAGAAGCACGGAGAGCAA TTATGCAACAATGGATTTACAAGAGAGCATGTTTACCTGGCCGAGAAGTTCCTCCGGAATTCAATCACCGTGCGAGAGGA GATTTCTTGACCGTCAATCTTGGAGATGTTGCAGCTTCTGGATTTAAGGCTTGCCTCTTGCTTTTGCCAAGCGGGAGTAA CAAAGTTTGCACTGTATATTGTCATCTCATAGGTAAGGAAGGTCGCCTCATTGCAAAACATAGATTTGGGGGAGTTTTCA AGGACTTTGTCGCAGCGCATCTGTTTATATTTTACTCTGTCTTACTTGAACAAGTGGACGTGATACGGTTTGAATTCAGC AGCATACACTACGAGATTACTGAATGTGGTGTACAAATATTGACTGATGCTTCATAG |
| AA seq | Len:979 aa MASYCSSSGSSCWRYDVFPSFRGEDVRGNFLSHLVKEFENKGIITFKDDLIERSHTISLEIIEAIRTSKFFVVLFSENYA SSSWCLDELVEILKCKEEKRLELLPIFYKVNPADVRNQTGQFGGGYRETCQGKDSEKQTKWKAALIKAANVAGEASYNWL VEADFITKIARDISAKLNATPSKDFENVTGIESHMRKMFPLLCLEDNEVRMVGIWGPPGIGKTTIARVLHSRLSSEFRFT VLMENVRGNYQRTIDSGEYNLQVRLQTELLSKIFNQKDLRVNHLGTIEERLKRQKVLIVLDDVNKVEQLEALANEIHWFG PGSRIIITTEDKQILVGHGINHIYEVKLPCRKTAVEILCIYAFKQSAPPEGFMDVVVEVAEISGHLPLGLRVLGSHMRGK NKDRWKLELRRLTTSLHEKVEKMLKISYDELHVRDKALFLHIACMFNGENIDLVTQLLVNSDLDVSLGLQVLLDKSLIQI TADREIVMHNLLQKLGREVVKQQSSDPGKRQFLFNTKETCNILGNNTGSGKILGISLDISEIQNDLSLSERVFEDMRNLM FLRFYDKTIDEKTSLKLHLPRGLNYLPTLSLLHWVAYPMKYIPSQFRPESLVELRMMHSQVEKLWEGTQTLAYLKTIDLS FSKNLKEVPDLSKAISLETLCLQGCESLVDLPSSVLYLQKLKWLRTTMCAKLKVVPPNINLASLEVVDMEGCSQLKTFPD ISKNIETTFMGNTGIEEIPPSVGQWSRLESLDINSCRNLKMFSHLPKTLVYLYLTGSGIEMIPDCIKDLQWLYYLYLDGC KRLVSLPELPGSIKILSANNCKSLEKISSSFNSPKARVEFSKCLSLDGEARRAIMQQWIYKRACLPGREVPPEFNHRARG DFLTVNLGDVAASGFKACLLLLPSGSNKVCTVYCHLIGKEGRLIAKHRFGGVFKDFVAAHLFIFYSVLLEQVDVIRFEFS SIHYEITECGVQILTDAS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |