Names & Information
Knowledge of BnaC02G0221000ZY:
| Gene Name | BnaC02G0221000ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: uncharacterized protein LOC104760394 isoform X2 [Camelina sativa] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:6987 nt ATGGTCGACTTTATCTGGGATATAAATCCAAAGGAAGCTGAAGCAAATTCAAGCAGAGATGACGATGTGAATCCCAGAAA GGATGACAATTTCATTGACTATGAAGGAAACACTGTTGTGACCTTTAATTTACAGAATTATGTTGAGAACAAGAGAGTTG AACCAGTCGTTGGTGAAAAGAAGCAAGAAAATGTAACTGAAAGCTCTACCATGGCGAAGCCCTTGCCAGAGCATAAAATG TTCATCAATTTCTGGGGAGACGACCTGCGTCATGGCTTTGTTGGCGACCTCGTCAAGGCCTTGAAAAAGGATGGAGTCTA TATAGATGTAGATGAGTTGCCGCGTGGAGATCTTACAGAACTTCTTGTGAATGGGATTAAGGAGTCGAGGATCGCACTCG TAATCTTCTCGAGCGGGTACGCAGAATCAAGTTGGTGCTTAAACGAGCTGCTGAAGATCAAAGAACTTATGGAAAGAGGG AAACTATTAGTCATTCCAATCTTCTACAAAGTGGAGCTATGGGAGGTTACACAACTAAAGGGTGATTTCGGGGTTAAATT TTGGAATTTGTGGCGTATTAATCGGGATAGCCATATCGTTAGCTGGAAGGAAGCTTTGGAGTCTGTTGCGTCCATGGAGG GGATCTATTTGAAGGAGCACAGTTCTGAGACCGAGTTCATCACTTTTGCCGTCAATGAAGTCCTAAAGAGAGTTTCTCTG TGGGAAGGAGAAAATCCATCTCTCTTTCCTTCGACAGAGAGAGGAAAAAGTACTGGATTGCCCATAGGGACAGGTGAAAA GCATAAAACTTATCAGAACAAACAGCACCTCTTTGGAATGGAACATCACATGGAGCAATTGGAGAAGAAGTTAGAGTTTG ACTGCGACAAAACTCGCATTATTGGAGTTGTTGGAATGCCTGGTATTGGTAAAACCACTCTCGCAGTGATGCTGCACGAG AAGTGGAACAGCCAGTTTATACGCTGTGTGCCTCTTCTAAATATCCGTAAGAAGTCAAACGACTATGGACCAGTGTGGCT GCGAAAGACTCTTCTGGAAGTTTTACTAGAGGGAAAGTTACCATTGATAAGTGACAAGACAACGCATGAATCTGTGAAGG ATATATTGCTTCATACTAAAGTTTTTGTTGTTCTTGATGACTTGAGTGACAAGAAACAATTAGAGTTTCTTCTCGGTAAC CTTGGTTGGATTAAGAAGGGAAGCAAGATTGTTATTTCAACATGTGACAAGTCATTGCTTGATGGATGTGCTCATGATAC TTATGTAGTACCGGTATTGAATGATAGAGAGGCCTTTCAGCTCTTTAATTATCATGTCTTCGATGATAAAATCCGCAGTT CCACCAATACCTTCCTGACGCTCTCTAGAAAGTTTGTGGATTACGCTCGAGGACACCCACTTGCTCTCAGTTTACTTGGT AGGGAACTTCGTGGGAAAGACCGGGATCACTGGGAACATAAATTGGCAACATTGACAAGTTCCAATATGATGTTCCAAGA TGTCTGGAGATTTTCTACTGATCAACTTAATGAGCGGCAGAAAGATGTGTTTCTAGACATAGCGTGTTTCTTCAACTCAG AGGATGAATATTTTGTTAGGAGTTTACTAGATTCAGGAGATCCTGACTCCATTGATACTGTGAGTGAAGTAAGAGATCTC GCCAACAAGTTCCTGATTACAATATCTGACAGCCGAATAATTATGAATGATATGATGTATACGTTTGGCAAGGACCTTGG TTCTCCTCGTTGGCTTAGGCTTTGGAACTACGAAGATTTCATCAACAAGTCAAAAACAATGGAAAAATCAAAGGTTAATA ATGTAAGAGGTATTTTCTTAGACATGTCAAAGTTGAAGAAGAGCATCCACTTGGAAAGTTCGATTTTTATCAATATGCTC AATCTTCGATACCTCAAGATATATGATTCTTGTTGTGCTCGGAAATGTATACCTAACCGCAAATTATACCTCTACAATGG GATTAAATTCCCCTTGAAAGAGGTGCGTTGTCTTCATTGGGTGCAATTCCCGCTGGAAGAAATTCCACTAGACTTCAAAC CAGAAAATCTTGTTGACCTGAGGTTGCCTTACAGCAAGATTGAACGTATTTGGAAAGGTGTTAAGGATACACCTCGGTTG AAATGGGTAGATCTGAGCTACTCACGTAAGTTGCTCGACTTGTCAGCATTATCAAAGGCTGAAAATCTTCGAAGTTTGAA TCTGGGAGGCTGCACGAGTTTGAATGAGTTACCGGTGGAGATTCAGAATATGAAGTCTCTTGTTTTGCTCAACCTGAGAG GATGCATATGCCTTTCATCTCTTCCCTTGATGAATCTAATTTCTCTGAAAATTCTCATCCTTACTGGTTGCACAAGCCTC CAGAAATTTCAGCTAATCTCCGAAAGTCTAGAAGTTTTACATTTAAATGGTACTGCCATAAAGAGACTTCCTCCAACCAT AATCAAACTCCAGAGGCTCGTCTTATTGAATTTAAAGAACTGCAAAAGGTTGGAGTCTCTTCCTAATTGTATCGGAGATC TGAAATCTCTTGAAGAGCTAATACTTTCTGGCTGTTCAGGGCTTAAGAATCTTTCAGATGTAAGGGAGAGCCTGAAACAT ATCCAGAGTTTACTTATCGACAGGATAGGTGCAAAAGAGATGCCACTCATATCGTGTGTCAGTATTTTCAAAAGCCAAGC CTCTGCAGATATGGTCTTACAACCGTTTGACCCAAAGGAATGGCCACGTGGTCTTATTGGAGTATGCTCTCTTCGTCGGC TATGTTTAAGCGGAAATAATTTTGTCAGCCTGCAAACCGACATTGGGAAACTTTACAATCTACATTGGCTAGAAGTGAAG CAGTGCAAGATGCTGACCTCTATTCCAATGCTTCCACCAAATCTCCACTACTTTGATGCTCATGGCTGTGATTCACTTGA AAGAGTTGCAAATCCTCTGGCCCTTCCAGGGCTGTTAGAAAAAGTCCATGCAATATTCATATTTTCAAGCTGCCACAAGT TGGATCAAGACGCAAAGGATAATATCATATCTTATATTCGGTGGAGAAGTCAGTTGGTGTTAGAGGCACTCTCTCGATAC AATGGGGGTTCTGTTTTGGAAGATTTCGGTGGAACTTGCTTTCCTGGATGGGAAGTACCAGCATGGTTCAGTCACCAAGC CTATGGATCGGCGTTAAAGCCAAAGCTGCTTCCACACTTGTGTGATAACCGGTTTACTGGAATAGCCCTATGCTCGGTTA TTGTACTTCCTGGCTATTATGAGCAGAGGAATCGTCTCTTGGTGAAATGTAATTGTGTGTTTAATAACGAAGATGGGTCT CGTATCCGCTTTAGTTGCACTATTGGCAGTTGGATCCCAAGTAACACACCACGGAAAAGTGAACTGCCTCATGTTTTTAT TGGCTATATCAGTATGTTGGATATCAAGAAACATGTTGAGGAGGAAGATGAAGAGGAATGCAGTCATACAGAGGCTTCAT TCGAATTCCAAGTGACAGATGGTACAGAAGTGTTAGAAGGTTGCGAGGTGCTAAAGTGTGGCTCCAGTTTGGTCTATTCA ACTGACGAAAGGACGAATATGAGTTGGTTTGCGAAGACTGGTGTAATTGCAGAGAGGATTAACAACATCCCAGGTCAATC AACATATTATGGTAACTCTGGAAGTCATGATGATATCCAGTATGAATCTTACTCTGGTCTAACTCTGGGAAGGGATGAGA CTTTCTTCAGTGAAGCGACTTTTGATGTTACCCCAAATTCACAGAAAAGTTATAAAAATAAGAAAGTGGGCCTATTGAAA AAAGAGAGTGACGCAGGAGGAGACTTCACTGAAAGCTCTTTTCATGACAACATATCTTCGGCAAACGTAGAGAAGATAAA AAGGCATCCCTTGGTTGGACTTGAACAGCGACTCAAGGAAATAGAAAAAGTTGTGTACTCAACACCAGGAAAAACTCGTA TTGTTGGTGTTCTTGGAATGCCCGGCACTGGTAAAACAACTCTAGCAAAAGAATTATTTGCAAAGCGTGGGTGTAAGTTT CCCAGTCACTTGTTTTTGCCAATGTCAACAGAGTGCAAACTGGAGCAGTTGAGGAGGGTATTCCTGAAAGAGTTACTAAA AAACGTAAATCAAGACATAAACGACGAGACAACACATGATTCAATGAAGGGTAAACTGCTTCAGACTAAAGTTTTTGTTG TTCTAGATAACGTGAGTGACAAGAAACAATTAGAGTTTCTCCTCGGTGACCTTGGGTGGATTAAGAAGGGAAGCAAGATT GTTATTACAACATGTGACAAGTCATTGCTCAAGGGGTTGGGTCATGCTACCTATGTGGTCCCACAAATGAATAACAAAGA GGCCTTTCAACTCCTTACTCATCATGCCTTCTATAATCAATTCCGTCCAGCAGAAACCTTCCTAACGCTTTCGAGAATGT TTGTGGATAATGTTGGAGGCAACGCACAGGATCTCAAGGTCCTGGGAAGCATCCTCTGTGGGAAAAATGAGGCCTACTGG CAATATGAGCTGCTAAGAGTGAGACAGAGTTTCAATATGAAAATGACAGATATCTGGAGATTCTCTATTGATCAACTTAA TGAGCAACAGAAAGATGTGTTTCTTGACATAGTGTATTTTCTTAAATCTGAAGAAGAGTATTTTGTTAGAAGTATATTGG ATCGAGGAAGTCATGAAGCTGTGAGTGGAGTAAGAGATCTCGCTGAGAAATTGCTTATTACTATTTCTTGTGGGCGAGTG GAGATGCATGATCAACTGTATTCACTGGCCAATGACCTTGGCCTTCCTGGGCGGCATAAGCTTTGCAACTACGAAGATAT CAACAATCTGCCAAAACTGAAACAACAGGAAGCTAAGAATGTGAGAGGTATTCTCTTAGATATGTCTGAAATAACGGAGA GTATTGCCTTGGAACGTGTGACCTTCTCTGATATGCGCAATCTTCTATACCTGAAGATATACAATTCTTGTTGTCGTCGG CACTGTAGAGCTGACTGCAACTTATACTTCCCTGATGGACTTGACTTCCCCTTGGAAGAGGTCCGATATCTCCATTGGGT GAAATTTCCTTTGCATGAACTTCCACAAAACTTCAGACCTGAGAGTCTTGTAGACCTGAGCCTTCCTTACAGCAAGATTG AACGTGTTTGGGAAGGTGTTAAGGATACACCACGGTTGAAGTGGGTAGATCTACGCCACTCAAGTAAGTTGCTCGACTTG TCGGCATTGTCAAGAGCTGAAAATCTTGAAAGATTAAATCTGGAAGGCTGCACGAGTTTGGATGAGTTGCCAGTGGAGAT CCAGAATATGAAGTCTCTTGTTTACCTGAACATGAAAGGATGCACACGTCTTTGGTATCTTCCGAAAATGAATTTAGTCT CTCTGAAAACTCTCATCCTCAGTGACTGCCTAAACCTAAAAGAATTTCAGGTCATCTCCGAAAGTGTAGAATATCTACAT TTAGATGGCACATCAATGGAAGGACTTCCTCCGGCTATACAGAACCTCCAGAGACTTGTTGTATTAAATTTGAAAAACTG CAAAATGTTGGAGTATCTTCCCAACTGTTTGGGCAATCTAAAATTTCTTGATGAGCTAATAGTCTCTGGTTGTTCAAGGC TCAAAAATCTTCCAGATGTCCGGAATAGCTTAAAACAGCTCCAGATTTTACTTTTTGATGGGACGGGAGCGAACGAGATG CCAAGCATATCGTGCTTCACTGGATACGAAGGGCCTGCTGATAATTTCTTACAACCTTTTGGGTCATATGCCACCGTGAG GGAATGGGCTTGTGGTGTTAATGGAGTATCCTCACTACGACATCTATGTTTGAGTGGAAATACGTTTGTCAGCCTGCAGC CTGACATCGTAAAACTTTATAATCTAAAATTGCTTGATGTGAAGCAGTGCAAGAAGCTGAGGTTTGTTCCAACGCTTCCA CCTAGACTTCAGTTCTTTGATGCACATGGCTGTGATTCACTGGAAAGAGTTGCAAACCCTCTGGCCCTTCCTTTGTTGTC TGAGCAGATCCATGCCAAATTCAATTTTTCCAACTGCAACAAGTTGGATGAAGACGCAAAGGATAGTATCATATCCTATT CTCGGTGGCGAAGCCAGTTAGTGCTAGATGAACTCACTCGTTACAATGAGGGTTCTACCTTGGAAGCGTTTACTGGAACT TGCTTTCCTGGATGGGAAGTACCGGCATGGTTCAGTCACCGAGCCTTTGGACCGGTGTTAAAGTCAAATCTGCCTCCACA CTGGAGTGACAATAAGTTAACTGGAATAGCCCTTTGTTCTGTTATCTCATTTCCTGACTACCATGAGCAGAGGAATCCTC TCTTAGTGAAATGTACTTGTGTGTTCAATAATGAATATGAGTCTCGTATCCGCTTTAGTTGCATTATTGGCAGTTGGAGC AAATCAAGTAACACACCAGGAAAGATTGAAGCGTCTCATGTCTTTATTGGCTATACCAGTACATTGGATATCAAGAAATA TGTTGAGGTGGAAAATGAAGAAGGATGTAGTCATACTGAGGCTTTGTTTGAATTTCAAGTGACTGATGGTACAAAAGTGT TAGAAGGTTGTGAGGTGCTGAAGTGTGGCTTTAGTTTGTACTATGCAACCGATGAATTGCGGATAAAATCTACTGTCAGT GGCCCTCTTGAAGCAAATCAGTACATATCGTATTCAGAAAACGTGACAATCTCGAATGTAAGACCGGAGAGCGGAACAGA AGAGAGATCACCAGCGCAAAGAACCGCTACCAGTTACCAACCACCGACCACTGAGTCTCGTGTATCTCCTCATGTGTATG GAACATCGGATATGGACCCCCTGTTGTCTGGGGAACCCCAACAATACAGAGCCGACCTTGTAAACTTCTTTTTTTTTTCT TTAAATCTTTATAAGAAAAGAAATTAA |
| AA seq | Len:2329 aa MVDFIWDINPKEAEANSSRDDDVNPRKDDNFIDYEGNTVVTFNLQNYVENKRVEPVVGEKKQENVTESSTMAKPLPEHKM FINFWGDDLRHGFVGDLVKALKKDGVYIDVDELPRGDLTELLVNGIKESRIALVIFSSGYAESSWCLNELLKIKELMERG KLLVIPIFYKVELWEVTQLKGDFGVKFWNLWRINRDSHIVSWKEALESVASMEGIYLKEHSSETEFITFAVNEVLKRVSL WEGENPSLFPSTERGKSTGLPIGTGEKHKTYQNKQHLFGMEHHMEQLEKKLEFDCDKTRIIGVVGMPGIGKTTLAVMLHE KWNSQFIRCVPLLNIRKKSNDYGPVWLRKTLLEVLLEGKLPLISDKTTHESVKDILLHTKVFVVLDDLSDKKQLEFLLGN LGWIKKGSKIVISTCDKSLLDGCAHDTYVVPVLNDREAFQLFNYHVFDDKIRSSTNTFLTLSRKFVDYARGHPLALSLLG RELRGKDRDHWEHKLATLTSSNMMFQDVWRFSTDQLNERQKDVFLDIACFFNSEDEYFVRSLLDSGDPDSIDTVSEVRDL ANKFLITISDSRIIMNDMMYTFGKDLGSPRWLRLWNYEDFINKSKTMEKSKVNNVRGIFLDMSKLKKSIHLESSIFINML NLRYLKIYDSCCARKCIPNRKLYLYNGIKFPLKEVRCLHWVQFPLEEIPLDFKPENLVDLRLPYSKIERIWKGVKDTPRL KWVDLSYSRKLLDLSALSKAENLRSLNLGGCTSLNELPVEIQNMKSLVLLNLRGCICLSSLPLMNLISLKILILTGCTSL QKFQLISESLEVLHLNGTAIKRLPPTIIKLQRLVLLNLKNCKRLESLPNCIGDLKSLEELILSGCSGLKNLSDVRESLKH IQSLLIDRIGAKEMPLISCVSIFKSQASADMVLQPFDPKEWPRGLIGVCSLRRLCLSGNNFVSLQTDIGKLYNLHWLEVK QCKMLTSIPMLPPNLHYFDAHGCDSLERVANPLALPGLLEKVHAIFIFSSCHKLDQDAKDNIISYIRWRSQLVLEALSRY NGGSVLEDFGGTCFPGWEVPAWFSHQAYGSALKPKLLPHLCDNRFTGIALCSVIVLPGYYEQRNRLLVKCNCVFNNEDGS RIRFSCTIGSWIPSNTPRKSELPHVFIGYISMLDIKKHVEEEDEEECSHTEASFEFQVTDGTEVLEGCEVLKCGSSLVYS TDERTNMSWFAKTGVIAERINNIPGQSTYYGNSGSHDDIQYESYSGLTLGRDETFFSEATFDVTPNSQKSYKNKKVGLLK KESDAGGDFTESSFHDNISSANVEKIKRHPLVGLEQRLKEIEKVVYSTPGKTRIVGVLGMPGTGKTTLAKELFAKRGCKF PSHLFLPMSTECKLEQLRRVFLKELLKNVNQDINDETTHDSMKGKLLQTKVFVVLDNVSDKKQLEFLLGDLGWIKKGSKI VITTCDKSLLKGLGHATYVVPQMNNKEAFQLLTHHAFYNQFRPAETFLTLSRMFVDNVGGNAQDLKVLGSILCGKNEAYW QYELLRVRQSFNMKMTDIWRFSIDQLNEQQKDVFLDIVYFLKSEEEYFVRSILDRGSHEAVSGVRDLAEKLLITISCGRV EMHDQLYSLANDLGLPGRHKLCNYEDINNLPKLKQQEAKNVRGILLDMSEITESIALERVTFSDMRNLLYLKIYNSCCRR HCRADCNLYFPDGLDFPLEEVRYLHWVKFPLHELPQNFRPESLVDLSLPYSKIERVWEGVKDTPRLKWVDLRHSSKLLDL SALSRAENLERLNLEGCTSLDELPVEIQNMKSLVYLNMKGCTRLWYLPKMNLVSLKTLILSDCLNLKEFQVISESVEYLH LDGTSMEGLPPAIQNLQRLVVLNLKNCKMLEYLPNCLGNLKFLDELIVSGCSRLKNLPDVRNSLKQLQILLFDGTGANEM PSISCFTGYEGPADNFLQPFGSYATVREWACGVNGVSSLRHLCLSGNTFVSLQPDIVKLYNLKLLDVKQCKKLRFVPTLP PRLQFFDAHGCDSLERVANPLALPLLSEQIHAKFNFSNCNKLDEDAKDSIISYSRWRSQLVLDELTRYNEGSTLEAFTGT CFPGWEVPAWFSHRAFGPVLKSNLPPHWSDNKLTGIALCSVISFPDYHEQRNPLLVKCTCVFNNEYESRIRFSCIIGSWS KSSNTPGKIEASHVFIGYTSTLDIKKYVEVENEEGCSHTEALFEFQVTDGTKVLEGCEVLKCGFSLYYATDELRIKSTVS GPLEANQYISYSENVTISNVRPESGTEERSPAQRTATSYQPPTTESRVSPHVYGTSDMDPLLSGEPQQYRADLVNFFFFS LNLYKKRN* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |