Names & Information
Knowledge of BnaC02G0229500ZY:
| Gene Name | BnaC02G0229500ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA02g24520D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:2595 nt ATGACTAACTTATTAATACTCCAGCCACTTGAAGGACTCAAGATTATGGATTTGGAGGGATCTAAAAATCTTCAAGAAAT CCCAGATCTTTCTAAGGCTATTAATCTCGAGATACTTCATCTCAACAATTGCTCGAGTTTGGTGGAGCTTCCTTCCACTA TCCAGTATCTCAATAATCTGGAGGAGTTGAACATGCAGTTCTGCGAAAACCTAGAGATTCTTCCACAAGGTGTCAATCTT GAATCTCTAGATCGCCTTGATCTTAGTGGATGCTCACGGTTGAAGAGTTTTCCTGATATCTCAACCAATATCACATGGCT CGATCTAAGCGATACAGCAATTGAAGACATCCCACATAAGGAAAGCGACGCTACAATGATTGAAGACATCACCAATGATG TTTTCCGTAAACTACTTTCAACTACATCGAAGGAGTGTGAGGATCTTGTTGGCATTGAAGATCATATCGCAGAGATAAGT ACATTGTTACGTTTGGAGTCTGAGGAAGTCAGGATGCTTGGTATATGGGGTTCCTCTGGAATTGGCAAGACTACCATCGC AAGAGCTCTGCTGAACCGATTTTCTTCAAGGTTTCAACGAAGCATCTTTATAGACATGGCTTTCGTATCTAAGAGTAAGA ACTTGTATCCTAGTGCAAATGCGGACGACTACAACCTGAAGTCGCATTTACGGAAAGAATTTCTATCTGAGATTTTGGGC GAAAAGGACACTAAGAAAGAGCATGTGGGTGCACTGGAAGAGAGGCTAAAACACCGAAAAGTTCTTATCATTATTGATGA TTTGGATGATCCAATGGTGCTAGATGCCTTGGTTAGTCAAAATCATAGGTTTGGACGTGGGAGCACAATCATCATGGTCA CAAAAGATAAGCATCTCTTAAGGGCACGCAAGGTTGATTGTATTTACGAGGTTGTTCTCCCATCTAAAGACCTTTCTCTT AAGATGTTATGTCGATATGCTTTCAGTAAAGATTCTCCACCTGATGGTTTGATGGAACTTGCTTCTGAAGTTGCACTGCT TGCCGGTAATCTTCCTCTGGGTCTTAAAGTTTCAGGTTCACATTTACAAGGTAGGAATAAAGAGGACTGTATTGATATGT TACTGAGGCTCCGAAGTGGCTTGGATGGACGAATTGGGAAAACAATGAGAGTCAGCTACGATGGGTTAAATAACAGAAAA GATAAAGCAATATTTCGTCATATTGCATGCTTTTTCAACGGTGCACATATCAATGACATCAAAGAGCTTCTAGCAAATAG TGACTTCGATATCAATATCGGGCTAGTCAACCTCATCGATAAGTCCCTGATACAGGTAAGATCGGGTAATGTAGAGATGC ACTGTTTGCTACAAGAAATGGGTAAGGAAATTGTCCGCGCAGAGTCCAATGATCCTGGAGAACGAGAATTCCTTGTGGAT TCAAAAGACATTTGCTATGTGCTTAGTAATGCCACTGAACTTAAAGGACTCAAGATTATGGACTTGGGGGGATCCAGAAA TCTTATGGAAATCCCAAATCTTTCAAAGGCCACTAATCTTCAGATACTTCGTCTCAACAACTGCTCGAGTTTGGTGGAGC TTCCCTCCACTATCCAGTATCTCAATAATCTGGAGGAGTTGAACATGCAGTTCTGCAAAAACCTAGAGATTCTTCCAAAA GGTGTCAATCTTGAATCTCTAGATCACCTTGATCTTAGTGGATGCTCACGGTTGAAGAGTTTTCCTGATATCTCAACCAA CATCTCATTTTTGAATATAAGCCAAACAGCGATTGAAGGAATTCCCACAAATTTGCATTTTGATAATCTCGTTAAACTTT TCATGTATGACATGATGAGTGTTCAACTATGGGAAGGAATGCAGCCGCTTACACCCCTCATGACCATGCTGCCTCCCACT TTGGAAATACTGGATCTCTCGGATATCCCAAGTTTGTTGGAGCTTCCTTCCTCAATTCAGAATCTATATAAACTGGAGGT GTTGCACATTATTGACTGCACAAATCTGGAGACTCTTCCTGTCGAAATAAACCTTGAATTTCTCAAGATCCTCCATCTTA CTGGATGCTCACGGTTGAAGAGCTTTCCAAGTATCTCAACCAATGTCTCGGAGCTCTTTCTAGAACGAACAGCTATTGAA GAAGTTCCTGGATGGATCGAGAACTTTGCTCACCTCACTTATCTACACATGCGTGGATGCAACAAGTTAAAATATGTTTC CTTAAACATTTATAAATTGGAACATCTAGAGATGGTTGACTTTTCATACTGCGGCTCGTTGACTGCAGCTAGCTGGATTG AAAGTCCACGTCTGCTGGCAATGGAAACAGAGAATATCCACTCGAAGTTACGGGTCCTCAAAGAGGCTTCCTTTCTTCTT CCAGATAATTATGTCCCAAAAATCCAGCTCAAACTGATCAAATGCTACGAACTGGATGAAGAGGCTATCCTTCGGCAACA ACCATGGTTTTTCAAGTCCATGATGTTTTTAGGTAATGAAGTGCCTCCATATTTCACGCACCGTAATACTGGAACCGTTC TCATCGTCCCTCTACTTCAGACCTCTCTTTCTTAA |
| AA seq | Len:865 aa MTNLLILQPLEGLKIMDLEGSKNLQEIPDLSKAINLEILHLNNCSSLVELPSTIQYLNNLEELNMQFCENLEILPQGVNL ESLDRLDLSGCSRLKSFPDISTNITWLDLSDTAIEDIPHKESDATMIEDITNDVFRKLLSTTSKECEDLVGIEDHIAEIS TLLRLESEEVRMLGIWGSSGIGKTTIARALLNRFSSRFQRSIFIDMAFVSKSKNLYPSANADDYNLKSHLRKEFLSEILG EKDTKKEHVGALEERLKHRKVLIIIDDLDDPMVLDALVSQNHRFGRGSTIIMVTKDKHLLRARKVDCIYEVVLPSKDLSL KMLCRYAFSKDSPPDGLMELASEVALLAGNLPLGLKVSGSHLQGRNKEDCIDMLLRLRSGLDGRIGKTMRVSYDGLNNRK DKAIFRHIACFFNGAHINDIKELLANSDFDINIGLVNLIDKSLIQVRSGNVEMHCLLQEMGKEIVRAESNDPGEREFLVD SKDICYVLSNATELKGLKIMDLGGSRNLMEIPNLSKATNLQILRLNNCSSLVELPSTIQYLNNLEELNMQFCKNLEILPK GVNLESLDHLDLSGCSRLKSFPDISTNISFLNISQTAIEGIPTNLHFDNLVKLFMYDMMSVQLWEGMQPLTPLMTMLPPT LEILDLSDIPSLLELPSSIQNLYKLEVLHIIDCTNLETLPVEINLEFLKILHLTGCSRLKSFPSISTNVSELFLERTAIE EVPGWIENFAHLTYLHMRGCNKLKYVSLNIYKLEHLEMVDFSYCGSLTAASWIESPRLLAMETENIHSKLRVLKEASFLL PDNYVPKIQLKLIKCYELDEEAILRQQPWFFKSMMFLGNEVPPYFTHRNTGTVLIVPLLQTSLS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |