Names & Information
Knowledge of BnaC02G0230000ZY:
| Gene Name | BnaC02G0230000ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC02g32310D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:3423 nt ATGTCTTCTTCTTCATCGTCTTGTGATTGGGTATACGACGTCTTCCCGAGCTTCAGAGGAAAAGATGTCCGTAAGTCATT CCTCAGCCATTTTCTCAAGGAGTTGGATCGAAAACTCATCAGTGCTTTCAAAGACAAGAAGATCGAGACAATGAAATGCC AAGAAGAGTTAAGTCAAATAGTTATACCCGTTTTCTACGAGGTTGATCCTTGTCATGTCAGACATCAGACTAAAGAGTTT GGAGAGGTCTTTAAGAAGACATGCCTGAGAAAAACAGAGGACGAGATACAACTATGGAAGAAAGCTTTGACCGATGTTGC AAATCTTGTCGGATATCATTCTCAAAACTGGGAAAACGAAGCAACAATGATTGAAGTAATAGCCAATGATGTTTTGGGTA AATTGAATTTAAATCCGTCTAAGGATTTCGAGGACTTTGTCGGGATCGAAGATCATATGGAAAAGATGAGTTCACTTTTG TGCTTGGAATCCAAGGAAGTGAAGATGATTGGGATATGGGGTCCTTCCGGAATTGGCAAGAGTATTATTGCAAGAGCACT AGAATCTCGACTCTCTCGTCACTTCCATGGTAAAGTTTTCATAGACATGCGTTTCATATCCAAGAGTAAGGAATGTTATC GCAAAGGTAACTCAGATGATATTAACATGAAGCTGCACTTGCAAGAAAACTTCCTTTCTAAGATATTAGATAAGGAAGGG GTAAAAGTAGATACCTTAAATGCCGTGAGAGAGAAGCTAAAGCGCCAAAAAGTTCTTATATTTATCGATGATTTGGATGA TCCGGTGGTGTTAGATGCGTTGGCTGGTGGAGACGAATGTTTTGGTCCTGGGAGTAGGATAATTGCAATTACAAAAGATA TGCAGATACTAAGGGCCCATCGGATTACATGTGTTTACAAGGTTGAAACCCCATCTAAAGAAATAGCGCTTCAGATGTTA TGTCGATCTGCTTTCAGACAAGATTCTCCGCCTGATGGGTTCATGGAGGTTGCGTCTGAAGTTGCAATGCGTCTAGGTGG TCTTCCTTTGGGACTTAACATTATAGGTTCGGCCTTGAGGGAAAGGGACAAAACTCATTGGGTAAATATGTTGCCAGCTC TTCGGAAAGGTCTAGACGGAAGAATTGACGAAGCACTAAGCTTCAGCTACAAATCATTAGAAAGAAAAGAATATAAAGCA TTGTTTCGTCACCTCGCGTGTCTTTTTAACGGTGATGAAGTCAGTTACATCAAGTTGATGCTTGCAGATAGTGAGTTGAA TGTTGACATGGGTCTTGAAGTTTTAGTTGATAAGTCCCTCATACGTGTGGTACCATTTTGGAATAATACGAACATCGTGG AGATGCACTGTTTAGTACAAGAAATGGGTAAAGAAATTGTTCGTGGACAATCTGACAAGCCTGGAGAACGAGAATTTCTA ATGGATTCAAAGGATGTTTGCAATGTTCTTAAAGATCGTACCGGTACTGAAAAGCTTATAGGTATATCAATGGACTTAGA TGAAATTGATAAGGTGAAGATACATGAGAAGGCTTTTAAAAGGATGAGTAATCTCCGTTTTCTAAAATTCTATAAAAGGT CATTGCAACCGAAGAAAGAAGTTAGATGGCAAACACCCAAAACACTCAATGATTTTCCGGATGAACTCAAGTTACTAAGT TGGCCAGGATATCCTATGGAATGCATGCCTTCTAAATTTTGTCCTGAATATTTGGTTGAACTCAGTATGCCTAACAGCAA GCTTAAAAAGCTATGGAAAGAAGTTGAGGAGCTTACATACCTGAAGGATATGGATTTGTCAGGATCTAAAAGCCTGAAAA AGATTCCAGATCTTTCAACGGCGACCAATCTTGAGACATTGAATCTTCATGGTTGTTCAAGCTTGGTGGAGCTTCCCTCT TCTATTCAAAGTCTCAATAAACTGACGGATTTGAACATGTCTGGATGCACAAATCTGGAGACACTTCCAAATGGAGCCAA CCTGAAATCTCTAGTTCGCCTCGTTCTCAATGGTTGCTCACAGTTGAAGGTTTTCCCTGATATTTCGAGTAAAATAGAAT CCATCATTGCAAACAAGACAGCTTTTGAAATTTTCCCTTCTAAATTGCGTCTTGAGAATCTTGTTGAACTTCGCATGGAG CACAGCATGAGTCAAAGGTTATGGGAGGGAGTTCAGCCTCTTACAAGCCTCACAAAGATAGTGTTGTCCGGATCACAAAA CCTGAAAGAAATCCCAGATCTTTCACTGGCAACAAGTCTAGAGACACTAAATCTCAATGGTTGCTCTAGTTTGGTGGAGC TAACTTGTTCATTCATTCAGAATCTTAATAAACTAACCACCTTGGAAATGACAGGATGCTCAAGTCTAGAGACTCTACCA ACTGGCATCAACTTGAAATCTCTCTACCGCCTCAACCTCAATGAATGCTCGCAGTTGAAGAGTTTCCCTGATATCTCAGA TAACATCTCCACCCTCTATCTAAACCAAACGGCGATAGAAGAAGTTCCTCGATGGATCGAAAACTTCTCCAAACTTGAAT CCTTGGAAATGTGGAAATGCAAAAATCTAGCGACTCTTCCAACTGGCATCAACCTAAAATCTCTCTATCGTCTCAATCTC AGTGGATGTCCACGGCTGAAAAGTTTTCCAGATATCTCAAGCAATATCTCCAATCTTTATCTTAACCAAACAGCGATTGA AGAAGTCCCTCCATGGATAAATAACTTTTCTAGCCTTGAAGCCCTGGAAATGTGGGAATGCAGACAGCTAAGATGCATCT CACCAAACATCTTCAAACTTGAAAATCTTGGCGAGATTTTCTTCTCGGACTGCGAGCAATTGTCTGAAGTTAGCTTTCTA GACTTTCCACTGGAGGAAGCAGAAGACACCAGTAATACTTGCACTAAGTTGTCATTGATAAGTTTCACCAACTGCATAAA TTTGAATCAAGAAAACCTCATTCAACAATCAGCTTCCAAGTATCTGATCTTACCAGGTGTTGAAGTGCCCCCTTACTTTA CGCACAGATCTGCTGGGAGCATCTTTAACATCCCTCTACATCATTCTTCTCTTTCTCAACAACCAGTCTTCAACTTCAAG GCTTGTGTCGTGGTTTCTGATGTCGATGCGGTTACTGAAGGAACAGAAACCGCCGACCATCATCTTTGCTTTATAGACAT TGAGGTAAATTGCCGGTTTAAAGACAGCCACGGGAACTACTCTGGGTCAACAGAGTCAATAGATTTCTCCTTACCTCAAG AGTATGATCATCTGATTATATTTGACTGTCCTTTCCGTCAAAACCAAGACAGTGGTGAATCGAATTGCGAACAAGTTGAG ATAGAGTTTAGTCTTGTTAGTACAGGGCTCAGACTAATAGGATGTGGTTTAAAACGCCAATGA |
| AA seq | Len:1141 aa MSSSSSSCDWVYDVFPSFRGKDVRKSFLSHFLKELDRKLISAFKDKKIETMKCQEELSQIVIPVFYEVDPCHVRHQTKEF GEVFKKTCLRKTEDEIQLWKKALTDVANLVGYHSQNWENEATMIEVIANDVLGKLNLNPSKDFEDFVGIEDHMEKMSSLL CLESKEVKMIGIWGPSGIGKSIIARALESRLSRHFHGKVFIDMRFISKSKECYRKGNSDDINMKLHLQENFLSKILDKEG VKVDTLNAVREKLKRQKVLIFIDDLDDPVVLDALAGGDECFGPGSRIIAITKDMQILRAHRITCVYKVETPSKEIALQML CRSAFRQDSPPDGFMEVASEVAMRLGGLPLGLNIIGSALRERDKTHWVNMLPALRKGLDGRIDEALSFSYKSLERKEYKA LFRHLACLFNGDEVSYIKLMLADSELNVDMGLEVLVDKSLIRVVPFWNNTNIVEMHCLVQEMGKEIVRGQSDKPGEREFL MDSKDVCNVLKDRTGTEKLIGISMDLDEIDKVKIHEKAFKRMSNLRFLKFYKRSLQPKKEVRWQTPKTLNDFPDELKLLS WPGYPMECMPSKFCPEYLVELSMPNSKLKKLWKEVEELTYLKDMDLSGSKSLKKIPDLSTATNLETLNLHGCSSLVELPS SIQSLNKLTDLNMSGCTNLETLPNGANLKSLVRLVLNGCSQLKVFPDISSKIESIIANKTAFEIFPSKLRLENLVELRME HSMSQRLWEGVQPLTSLTKIVLSGSQNLKEIPDLSLATSLETLNLNGCSSLVELTCSFIQNLNKLTTLEMTGCSSLETLP TGINLKSLYRLNLNECSQLKSFPDISDNISTLYLNQTAIEEVPRWIENFSKLESLEMWKCKNLATLPTGINLKSLYRLNL SGCPRLKSFPDISSNISNLYLNQTAIEEVPPWINNFSSLEALEMWECRQLRCISPNIFKLENLGEIFFSDCEQLSEVSFL DFPLEEAEDTSNTCTKLSLISFTNCINLNQENLIQQSASKYLILPGVEVPPYFTHRSAGSIFNIPLHHSSLSQQPVFNFK ACVVVSDVDAVTEGTETADHHLCFIDIEVNCRFKDSHGNYSGSTESIDFSLPQEYDHLIIFDCPFRQNQDSGESNCEQVE IEFSLVSTGLRLIGCGLKRQ* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |