Gene Name | BnaC02G0270900ZS |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | BnaA02g16190D [Brassica napus] |
Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
NT seq | Len:1428 nt
ATGAATAGAATCTTGAGAAAACTATCGTGCGTTAAGACAAAAGTTAAAACTTCACTGCGACTATTCGAATCCAGGTCATC
ACTGTCTTCTTCCTCTTCTGCCTCATTCACTCCTAAGAGGTTCGACGTCTTTCTAAGCTTCAGAGGCGCAGATACTCGCA
GGAAGTTCGTTAGCTTTCTGTACAAGGATCTAGAGGCTAAAGAGATTCGAACGTTCAAAGACGACAAGGAACTGGAGAGT
GGCCGTCCGATTCCACCGGAGCTTATCCAAGCCATCAAAGGATCAAAAATCGCCGTCGTGGTGGTCTCTGCGACTTACCC
TGCTTCCTACTGGTGTCTAGAGGAGCTCGTGAAGATTCTGAAGTACGAGAAAAAGGGTTTGCTCAAAGTGCTGCCTGTTT
TCTACGAGGTTGATCCTTCTCACCTGAGGTGGCAGATCGGAGAAGTTGCGAAACAGTTCAAGAAACACGAGAAGAGACAA
AGCAAAGAGAGGGTCAAGTCTTGGAGGGATGCGTTGGCTTATTTGGCTAATCTTTCCGGCGAATGTTCCAAAAAATGGGA
TGATGACTCAAAGCTTGTCGATGGAATCACGGAGAAGATATCAAAGATGTTGTTCTCAACAACACCTACCAACGGTAACA
ACCTAATTGGTATCGACCAACACATGGACGAGTTGTATCCATTACTGGATCTACACTCAAACCAAGGTGTTAGAGTGATT
GGTATATGGGGAAGAGGAAGCATCGGAAGATCAGTACTAGCTAAGCACGTCTACGAAAACATCTCACATAACTTCGAAGC
TCATTGTCACCTCGAAGACGTGAGGAGGGTTTCACGACACTGCCGCAGATCTCATCTACAAGAAGAGCTTCTTTCCAAGA
TGCAAGGAGAAGGCCTGGGCGCAAAGACAAGGTGTCTTAACGCAATCAAAGCAAGGCTCAGGAACAAGAAGATTCTGCTT
GTGGCTAACGACGTAGACAAGATCAAACAGTTAGATGCGCTTGCGGAGGAGTTTAGCTGGTTTGGTCCAGGGAGCAGAAT
CATCATAACCACACAAGATAGACAACTTCTTAGTTCATCTGGTGTGACGAGTGTCTATGAAGTTGAGCTCTTGAGATGCT
ACGAAGTTCGTCAGCTATTCAGGTCAGTAGCATTCAAGCAGAGAAGTGATCCTGAAGTTCGTCAGCTCTTTAGGTCATTA
GCATTCAAGCAGAGAGATGAACATGTTGGTTTGGAAGAGCCTACATATAGACCCATGGATCTTCCCGTTATTGATGGAGA
TGGTATAAACAATGCCTCTGGCATCGATCATTTAATCAAAGAGGTCTCAGACCACAAAAGATATCTGGCTTGCAAGATGT
GCCGATATAGAGCCTTGCACCTTGGTAATGGACTTGAAGGCCACCGATGGTGCAAAACCCGGCGTTAG |
AA seq | Len:476 aa
MNRILRKLSCVKTKVKTSLRLFESRSSLSSSSSASFTPKRFDVFLSFRGADTRRKFVSFLYKDLEAKEIRTFKDDKELES
GRPIPPELIQAIKGSKIAVVVVSATYPASYWCLEELVKILKYEKKGLLKVLPVFYEVDPSHLRWQIGEVAKQFKKHEKRQ
SKERVKSWRDALAYLANLSGECSKKWDDDSKLVDGITEKISKMLFSTTPTNGNNLIGIDQHMDELYPLLDLHSNQGVRVI
GIWGRGSIGRSVLAKHVYENISHNFEAHCHLEDVRRVSRHCRRSHLQEELLSKMQGEGLGAKTRCLNAIKARLRNKKILL
VANDVDKIKQLDALAEEFSWFGPGSRIIITTQDRQLLSSSGVTSVYEVELLRCYEVRQLFRSVAFKQRSDPEVRQLFRSL
AFKQRDEHVGLEEPTYRPMDLPVIDGDGINNASGIDHLIKEVSDHKRYLACKMCRYRALHLGNGLEGHRWCKTRR* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0005515 |
Pfam | NB-ARC domain |
KEGG | HSPA4 nucleotide-binding domain protein; K03283 heat shock 70kDa protein 1/8 (A) |
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