Names & Information
Knowledge of BnaC02G0361500GG:
| Gene Name | BnaC02G0361500GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC02g47330D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=1 SV=1 |
| NT seq | Len:3087 nt ATGGTGACAACTTCTTCATGTTCCAACGTCAACGTAGGACCAGAAGTGTTCATCAACTTCCGAGGAAAAGAGCTGCGCGA GAATTTCGTCTCCCATCTCTATAAAGCATTGCGCCAGAGTGGGATCAATGCTTTCATAGACTCTGATATGGTTCTGGGCG ATAAACTCATAACCCTTTTCAAAACAATCGAGGAGTCCAAGATAGCGTTGGCGATTTTATCGAGCAAGTACACGGAGTCA CAATGGTGTCTGGAGGAGCTGGTGAAGATAAAGGAATGTAGTATAAATGGGGAAGGATGCAAAAACCTAGTGGTCATTCC AATCTTCTACAAGCTGTCTACATCTATCGTGGATAAGCTTGAAGGTGAATTTGGTGTTAACCTATTGAATGTGTGGAGGG AACCAGGTGGTGCACGAGACAGCCGGATTGTGAAGTGGAATGCGGCTTTGCAGGATATGCTGAGCAGAGCGGCTTTGATA TATGACGGAAGCATCGAGGAGAATGCTTTCGTGGCTAGGATCGTTGAGAAGGTAAATGATGCCCTATCCCTAATTTGGTC GCAAAGTGAAGCAAACCCTAACTTACAAAAGAGAGGAGTAGAAGAAATCCCTAACCCTCCAAAATTCTATAACATAGCAT TAAGCAGTGCTGAACCAGGAGAACAACGCCTGAAACAGTTGGAGGAGAAGTTGCATATGGACTCATTGGACTGCAATGAA GACGAAACTCGTGTTCTTGGAATTGTCGGGATGGCTGGTATCGGCAAAACCTATCTCGCGAAGAAGCTCTTCTTCAAGCT TGAGACGAAGCTTTGCCGTGCCTTGATTATTGAGTTCGACTGCGATAACTCGAATCAATTGGAGAAGAGACTCGTGGAAG AGCTCTTCAAGGCTCAAATCGGCACTACTCTTGAGGGGAACTACCTGGAGCTGTCGAGAAAGTATGTTGATTATACAGGA GGCAACCCATTAGCTCTTGAGGCATTCGGTGAGGAGATTCGTGGGAAAGACGAGGACCACTGGGAAGCAAGACTTAGAAC ACTCTCAAAAGTTTCCAGTGAGAAGATTGGGAAGGTGTTGAGAACCTGTTTCGATGGACTAAACCAGAAGCAGAAAGATG CGTTTCTTGATATAGCCATTTTCTTTAGATCAAAAGATGAGGACTACATCAAAAGCTTACTTGAATCTTTTGACCCTGAC ACATCAAAAGCTGGGAATAATTTTAGAGAGCTTTTAGACAAGTTCTTGATTGGCGTATCGGATGGCCGAGTAGAGATGAA TAATCTACTATTGACAATGGCTATGGAGCTTGTTGAAGCAAGTGGAGGAAAATATTTGTTACTTCCATCAGATTCTGCAG GATCTAATACTGATGCCCTGAAAAACAAGGAGGGAAAATACAAGGTTAGAGGTATTATCTTAGACATGTCTAATATGGAG GAGAAGCCCTTAGACAACCAAGCTTTTGTAAGTATGAGTAGTCTACTCTACCTGAAAGTCTACTACTCTCTCTGTTCTAT GCACTCTAAAGCGGGGTGCAAGTTGAACTTACCAGACGGAATTTACTTCCCAAAAGATAGCATCCTCAGATATCTTGATT GGATGAGATTCCCCCGGAAGGAACTTCCATCAGACTTTGAGCCAATGAATCTTATCGATCTTAGGTTGCCTTACAGCAAG GTTGCACCGAAACTGAAGTGGGTCGATCTAAGTCACTCCAGTGAGTTAACTTCCATTTCAAGTCTATCAGATGTGCCAAA TCTTTTAAGATTAAACCTGGAAGGCTGCACGAGTTTGAAGGAGTTACCTGAGGAGATGAAAAAGATGAAGAAACTTTTTT TCCTGAACCTAAGAGGATGCACAAGTCTCTTGTCTCTGCCAAATATCACTCTGGATTCCCTGAAGACTCATTCTCAGTGG CTGCTCAAAGCTCCGGACATTCGAAGTGATTTCAGAAAGTCTAGAAACTCTGTACTTAAACGGCACTGCAATAGATGGAC TTCCTCCAGCCATTGTCACTTCAAGAACTCAAACTCTCTTGAAGTCATGGAACGCTTGCTGGTTTTACTGCTTGATGGAA CATCAATAAGGGAGATGCCAAGTAGTGTTATCTACTTATCCTCCCTGCGGCGTCTATGCTTAAGCAGGAATGACAAAATA AGCAGCCTAAAATTTGACATGGGTCACATGTACCATCTGAAGTTGCTTGAGTTGAAGTACTGTACTAATCTCACATCTCT TCCGAGACTTCCACCAAATCTTCAGTGCTTAAATGCACATGGCTGCACTTCGCTAAGGACAGTCGCCAGTCCCCTAGACC TTCTGATGTCGACCGAGCATATTCATTCCACCTTCATTTTCACTAATTGTCATGAAATGGAACAAGGCTCAAAGAATGAT ATCATATCTTATATCCAGAAGAAAAGCGAGATGATGTCAGATGATCGATATAATCAGGATTTTGTTTTCAAAGCCTTGAT CAGTACTTGCTTTCCTGGATGTGACATACCCGCATGGTTCAACCACCAAGCATTGGGATCAATCTTAAAGATGGAGCTTC CTAAAGATTGTAATACAGGCAGATTTGTCGGGGTAGCTCTATCTGTTGTAGTCTCGTTTAAGGAGTACAAACACCAAAAC AACAGTACTCTCCAAGTGAAATGCACTTGTGAGTTCACTAACGCATCCTTGAGCCTGGAAAGTTTCATAGTTGGCGGTTG GTCGGAACCAGGGGACGAGCCACATACGGTTGAGTCGGACCATGTATTCATTGGCTACACCACATGGTTCAATATCAAGA AACGTCAACAGCTTTCATCAGCTAATGAAATTTTCCTTAGATTTGAAGTGACAAATGGTACAAGTGCGGTTGCAGAGTGC GAGGTGATGAAGTCTGGCTTCTCTTTGGTTTATGAGGTTGAAGTAGCTGAGAATACATCTTTGGAGGCAACTTCAAAGTT GGAGAAAAGAATCTCTTATAAAGAAGATGGTTACCCAAGCGCTAGTCCAACCAAAGCTGACTCTAAAAGAGATGAGGCTA TGGAGGTAAAGCAAGATACTTTTCCATTGAGCCATGTAATCGGCTGA |
| AA seq | Len:1029 aa MVTTSSCSNVNVGPEVFINFRGKELRENFVSHLYKALRQSGINAFIDSDMVLGDKLITLFKTIEESKIALAILSSKYTES QWCLEELVKIKECSINGEGCKNLVVIPIFYKLSTSIVDKLEGEFGVNLLNVWREPGGARDSRIVKWNAALQDMLSRAALI YDGSIEENAFVARIVEKVNDALSLIWSQSEANPNLQKRGVEEIPNPPKFYNIALSSAEPGEQRLKQLEEKLHMDSLDCNE DETRVLGIVGMAGIGKTYLAKKLFFKLETKLCRALIIEFDCDNSNQLEKRLVEELFKAQIGTTLEGNYLELSRKYVDYTG GNPLALEAFGEEIRGKDEDHWEARLRTLSKVSSEKIGKVLRTCFDGLNQKQKDAFLDIAIFFRSKDEDYIKSLLESFDPD TSKAGNNFRELLDKFLIGVSDGRVEMNNLLLTMAMELVEASGGKYLLLPSDSAGSNTDALKNKEGKYKVRGIILDMSNME EKPLDNQAFVSMSSLLYLKVYYSLCSMHSKAGCKLNLPDGIYFPKDSILRYLDWMRFPRKELPSDFEPMNLIDLRLPYSK VAPKLKWVDLSHSSELTSISSLSDVPNLLRLNLEGCTSLKELPEEMKKMKKLFFLNLRGCTSLLSLPNITLDSLKTHSQW LLKAPDIRSDFRKSRNSVLKRHCNRWTSSSHCHFKNSNSLEVMERLLVLLLDGTSIREMPSSVIYLSSLRRLCLSRNDKI SSLKFDMGHMYHLKLLELKYCTNLTSLPRLPPNLQCLNAHGCTSLRTVASPLDLLMSTEHIHSTFIFTNCHEMEQGSKND IISYIQKKSEMMSDDRYNQDFVFKALISTCFPGCDIPAWFNHQALGSILKMELPKDCNTGRFVGVALSVVVSFKEYKHQN NSTLQVKCTCEFTNASLSLESFIVGGWSEPGDEPHTVESDHVFIGYTTWFNIKKRQQLSSANEIFLRFEVTNGTSAVAEC EVMKSGFSLVYEVEVAENTSLEATSKLEKRISYKEDGYPSASPTKADSKRDEAMEVKQDTFPLSHVIG* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine rich repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |