Names & Information
Knowledge of BnaC02G0398700ZS:
| Gene Name | BnaC02G0398700ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:3795 nt ATGGCCAAAACAGACCACCAAGTGTTCATTAGTTTCAGAGGAGCAGACGTGCGAAAAAACTTCCTAAGCTTCCTTACAGA CGGGCTAAAAAGGGCGTGCGTAAATTACTATGTCGACACTAAAGAGACGAAAGGTGAAGTTCTTGACATCCTTCTTCAAA GGATCCAAGAGTCGCGGCTCGTGCTGATCATCTTGTCCAAAAACTACATGCAGTCGAATTGGTGCATCAAAGAGCTGCGT ACGACGACTAAGGATATAACAGAGTCAAGAAGGAAGGTCATCCCGATCTTCTATAATGTCCAAGTCGCAGATGTGAAGGA CAAATGGAAAGTTGGCGAACAAGCAGAAGGAGTAGAAGGAGAAGAGACAGTGGAAGAGAGGGAGAAAAACGTGAAGGAAG CTTTGATGATTCTTACGAGGCATATGGGTATGAGATCTGATGAGTACGGTACTGACTGTGAATTCATAGAACATATCGTC AAGGAAGTAAAGAAAGTGTTAACCAGTATCGAACAAGAGGAGAAGGTGAAGGCTTCCGTCAATACTACGGTGAGATCTGA AGGTGAGAAGCAGGAGGTGTCTTCGCTCACGGGGACAAACTTGCCAGGAGAAGGAGAAGAGCTTGAGACAAAGGAAAATG TTAAGTTATTTGGGATCACGCAACGTCTACAAAAGCTACAAGAGAAGTTAGGTATGCATGGAGTGGTTTCCAAGGAAACT CGTATTATTGGAGTTCTTGGGATGGCTGGTATTGATAAGACGATAACCGAAGAGACCACACATGAATCCGTGGAGACGGA GCTACTTGATAGCAATGTTTTTCTTGTCCTGGATAACGTAAGCAACAAGAAACAACTAGAGTATCTTCTCGGAAACAGAA GGTGGATTAGCCAAGGCAGCAAGGTTGTTATTGTGACAAGTGATAAATCATTGGTCGAGGATGTTGTCAGTGATACTTAC GTTGTCCCAGGATTGAACGAGAAGGAAGGGTTAGAGTGTTTTTGTTATCATGCCTTTGGTGACCACAAAGTCCATGAAGG AAGTTTGATGAAGCAATCAAGAGAGTTTGTGGATTACGCTAGAGGAAACCCATTAGCTCTCAAGGTACTTGGACCGGAGC TTCGTGGTAGAGACAAGGCTCACTGGGAATCCAAGCTACTTCAACTCGCACAGAGTCCAAGCAATGTGTTGAATGTGAGT TACGATGGTCTTAGCCAGCAACAAAAGGAAGCATTTCTTGATGTCACTTGTTTCTTCAGATCAGAAAATCACAAGTTTGT GACAGCTTTGGTCGATTCTGAGCCTGACAAGGGTAGTAGCGAGATCAGAGATCTTGCGGACAAGTTCCTGATAGATATCA CTGGTGGCCGAGTAGAGATGCATAATTTACTGTACACACTGGGGAAGAAACTAGCTTCCAAACAACAAAAGAGGCTACGT AACCATCATGAAATTATCCGAGCGTTAAAGAGAAAAACGGGGAAAAGCACTATCAATGGTATCAGAGGTATGTTTTTGGA CATGTCTGAAGTAGGCACTGACACAGCATTAAGCAAAGAGGCTTTTAATGGGATGGACAATCTTCGATATCTCAAAATCT ATGACTCTCATTTTCCTCAACAAAATGAAGCTGGCTACAAACTACACTTCTCCAATGGAGTTAAGTTACCGTTACAAAAG ATCAGGTATCTCCACTGGCTGAGATTCCCAGGGGAAGAACTTCCTCAAGACTTCAACCCTAAAAATCTTATTGACCTCAA GCTGCCTTATAGCAAGATTAAACGGCTTTGGGATGGTGTTAAGGATACATCAAAATTAACATGGGTCGATCTCAGCCACT CAGTCAACCTTAGCGACTTGTCGGGCTTATTAGGATCCCAAAATCTTCGAAGATTGAACCTGGAAGGCTGCAAAGAGTTG AAAACATTAGACGCGAGGATGGAGAACTTGACAAGCCTTGTTTTCCTGAATCTGAGAGGCTGCTCAAGTCTTGTATCACT CACAGAGATGAATATGGAGTCTCTTAAAACACTCATCCTCAGTGACTGCTCGAATCTCGAGGAGTTTCAGATAATATCAG AACAACTAGAAGCATTATACTTAGATGGAACATCCATAAAGACACTTCCTCTATCTATGATCAAGCTCCAGAAACTAGTC TTGTTGAACCTCAAGGACTGCACAAAGCTAGCGACCGTGCCCGGCTGTCTTGGAAATATGAAAGCTCTTCAAGAAGTAAT ACTCTCAGGTTGTAAAAAGATGGAGACCTTTCCTGATCTGCAAGAGAACATGAGACGGCTGCGGATATTTCTGCTTGATG GAACATCGATAAAAGAGGTGCCAAAGCGATTGCAAAACCCTGGCCTCTCAAGATGGCCACACCATGGTGATGGTGGTGTC AAAGGCTTCCCCTTGTTGAGACACCTCAGCTTAAGAGGAAACGATAAGATCCAAAGCCTGCAACCTGACATTGGTGACCT GTACCATCTAAAATATATTGACTTGAAGTTCTGCAAGAACCTTGCATCTGTTCCGACGCTCCCACCAAACCTTCAATGCT TAAATGCACATGGCTGTGAGTCACTGACAACATTGGGAAACCCACTTGCCCATCTTGTTCTGACAGATCAAATCCATGCC ACACTCATTTTCTCAAACTGCAACAAACTTGATGAAGATGCAAAAACTGGTATCATTTCATACATTCAGAAGAAGAGCCA GTTGATGTCAGATGCACTTGATCGCTACAATTTGGGCTCTGTTGTGGAATCTTTTGTTGGAGCTTGCTTTCCTGGATGTG AAGTACATGCATCGTTAAGTCACCAAGCCTACGGATCAGTGGTAGTACTACCAGAACTGTCGCGACACTGGAGTAACAAT GGGACCACTGGTGTAGTTCTATGTGCAGTTGTCTCCTTTACAGATTACCAAGACCAAAACAATCATGTCCTAGTGAAATG CACCTGTGAGTTCAAGACTTCAGATGGGTCTTTGAGGCAGTTTAGTTGCATGGTTGGAGGAAATCGGCTGCGGACGATCA ACTCAGACCACGTATTTGTTGGATACACGAGCTGGTTGCAGATCAAGAAACAAAAGGAAGCAGATGATGATGATAAGAAG GATTATAGTTGTAGTGATGATGATCAGGCTTCTCTTAGATTTGAAGTGATAGACAGTACAAGAGAGCTGGTGAAGAATTG TCAGGTGATAAAGTGTGGTTTCAGTTTGGTCAATGAATCTGATGAAGCTGAAAGTTTTTCTTGGGAGGTCAACAGGATCC ATGGTGAAGCTTCAGAGATGGAAGTTATCAATCAACAAGGAGAAACAAGTACAGTGAGTAATAACAGCACCCAGGGTGTA TTAGCAAGCAGAATAATTGATAATGAAGAAGCTTTGAGGAGCCAACAAAGAGAAACAAGATCCATAGGTAATAACAATAA CGATACCAATGATGTGTTGATGTTGTTACAAGCGTATTCAGACGATAGCGAATTAACTGATGGTGATGAATCTCAAAGGA TGGAAGAGATCAACCAACAAGGACGCAAAATCTCAATACGTGATGTATCAATGGTGTCTCAGGATTCAGAAGAAAGTGAC GAATCACAGAATAATAAACAAGATGAGACAAACTCTTGCGTATCTTCAGAAGATCAAGGGAATAGCTATGTGCAGGATTG TGGTAGAGTAACAGAAAACACAAGTGCGCAGATGATAAAACCTGTTGGGCTTCTTTGTCTTATGATCTCCATTTCTGCTG GAGCTGCTTTCATCCTTGGAAAGAGAAAGAGATGA |
| AA seq | Len:1265 aa MAKTDHQVFISFRGADVRKNFLSFLTDGLKRACVNYYVDTKETKGEVLDILLQRIQESRLVLIILSKNYMQSNWCIKELR TTTKDITESRRKVIPIFYNVQVADVKDKWKVGEQAEGVEGEETVEEREKNVKEALMILTRHMGMRSDEYGTDCEFIEHIV KEVKKVLTSIEQEEKVKASVNTTVRSEGEKQEVSSLTGTNLPGEGEELETKENVKLFGITQRLQKLQEKLGMHGVVSKET RIIGVLGMAGIDKTITEETTHESVETELLDSNVFLVLDNVSNKKQLEYLLGNRRWISQGSKVVIVTSDKSLVEDVVSDTY VVPGLNEKEGLECFCYHAFGDHKVHEGSLMKQSREFVDYARGNPLALKVLGPELRGRDKAHWESKLLQLAQSPSNVLNVS YDGLSQQQKEAFLDVTCFFRSENHKFVTALVDSEPDKGSSEIRDLADKFLIDITGGRVEMHNLLYTLGKKLASKQQKRLR NHHEIIRALKRKTGKSTINGIRGMFLDMSEVGTDTALSKEAFNGMDNLRYLKIYDSHFPQQNEAGYKLHFSNGVKLPLQK IRYLHWLRFPGEELPQDFNPKNLIDLKLPYSKIKRLWDGVKDTSKLTWVDLSHSVNLSDLSGLLGSQNLRRLNLEGCKEL KTLDARMENLTSLVFLNLRGCSSLVSLTEMNMESLKTLILSDCSNLEEFQIISEQLEALYLDGTSIKTLPLSMIKLQKLV LLNLKDCTKLATVPGCLGNMKALQEVILSGCKKMETFPDLQENMRRLRIFLLDGTSIKEVPKRLQNPGLSRWPHHGDGGV KGFPLLRHLSLRGNDKIQSLQPDIGDLYHLKYIDLKFCKNLASVPTLPPNLQCLNAHGCESLTTLGNPLAHLVLTDQIHA TLIFSNCNKLDEDAKTGIISYIQKKSQLMSDALDRYNLGSVVESFVGACFPGCEVHASLSHQAYGSVVVLPELSRHWSNN GTTGVVLCAVVSFTDYQDQNNHVLVKCTCEFKTSDGSLRQFSCMVGGNRLRTINSDHVFVGYTSWLQIKKQKEADDDDKK DYSCSDDDQASLRFEVIDSTRELVKNCQVIKCGFSLVNESDEAESFSWEVNRIHGEASEMEVINQQGETSTVSNNSTQGV LASRIIDNEEALRSQQRETRSIGNNNNDTNDVLMLLQAYSDDSELTDGDESQRMEEINQQGRKISIRDVSMVSQDSEESD ESQNNKQDETNSCVSSEDQGNSYVQDCGRVTENTSAQMIKPVGLLCLMISISAGAAFILGKRKR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like; K16226 disease resistance protein RPS4 (A) |