Names & Information
Knowledge of BnaC02G0399100ZS:
| Gene Name | BnaC02G0399100ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Camelina sativa] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:2748 nt ATGCCTGGGATTGGTAAAACAGCTCTCGCTGATATGCATTTCAAGAAGTGGCACAATAGGTTTGTGTTTACAAAGAATAT CAAGGCGATACGTGAGGAGTCAGACGACGAATCGGGTTGGCTGAAGGACATACTTCTGAATGGTAAAGAGTTGAATGAAA AGGCTCAAATGTTCAACAGGAAGATTTTCCTTGTTTTGGATGATGTGAGCCATAAGAACCAAGTCAACTTCTTACTCGAA AACCTCGAATGGATCAAGAAAGGAAGCAAGATTGTCATTACAACGCGTGACAAGTCCTCCATCGCAGGTCTGGTTCAGGA TACTTATGTCGTCCCTGGACTGAACGATAAAGAAGCCTTGGAACTCTTTAAACATCATGCCTTTAAAGAAAAAGTCTCTA GCACCAAGGGGAACTTTCCCAAACTATCAAAAAAGTTTGTGGATTATGCTGGAGGCAATCCACTAGCCCTTGAGGAATTG GGAAAGGAGCTTTGTGGGGAAGAAGAGCCTCACTGGGAGAGAAGACTAGTAACACTACCACATTGTTGTAATCCAAAGAT CCTAACTGAGTTGAGAATCAGTTACGACAAACTAAGTGATCAGCAGAAGGACGCGTTTCTCGACATAGCTTGTTTCTTCA GATCAGAGGAGGAGGATTATGTGAAATGCTTACTAGACCCCTATGGACCTGAGTCTGGTGAAGTTGTTAGAGATCTTGCT GAAAAGTTGTTCATCTGTATCTCTGCCGGCCGAATAGAGATGCATAATTTACTGTGTACAATGGGGAAGCAACTTGGTTC ATCATATGAACATAAGTCAGGAGAAAGAATGTGGAGTTCTGACAAAATTACTAACACCTTACGCTCAGAACAAGTGATCC TCAATCAGAAAATAAAAAAGGTGAGAGGTATATTCTTAGACATGTCCAAAGTTGAGACGGGAATACCTATAGACCCAAAG ATCTTTGTCGAAAAGTTCAACAAGCTGACTCTGCGGTACCTCAAGATCTATGACTCTCTTTGTCCTCAGAAATGTGAAGT TGACTGTAAAGTAAACTTGCCAGATGGACTGGAGTTCCCTTTTAAAGAGATTCGATGTCTCCACTGGCTGAAATTTCCAT TGGATGAACTTCCACCAGACTTCAACCCGGAGAATCTGATTGATCTTAGGCTGCCTTACAGTAAAATTCAACGTGTTTGG GAAGCTATTAAGGATACACCATGGTTGAAATGGGTGGATCTGAGTTACTCGACCAGATTGACTGACCTGTCAGCTTTGTC AAGGGCATTTTACCTCCGAAGATTAAATCTTGAAGGCTGCTCGATTCTTGAGAAGTTGCCAAAAGAGATGAAAAATATGA AAAGTCTTGTTTTCCTTAACCTCAGAGGATGCATCATGCTCTCGTCTCTACCAGAGAAGCTGGATCTAATTTCCCTGAAG ACTCTCATCCTCAGTGGCTGCTCAAATTTTAACAACTTCGAGCTGATCTCTGAAAATCTTGAATCTCTACATCTAGATGG GACTGCAATTGAGAGTCTTCCTCGGACCATGAAAAGTTTTAAGAAACTTGTGTTGTTGAATCTTGAAAACTGCAAAATGT TGGAGTTTCTACCTGATTGTCTCGACAAGCTGAAGGCTCTTGAAGAACTAATACTCTCTGGTTGTTTTAGGCTTCAGAGT TTCCCTGATATTAAGGAGAACATGGAGAATCTGCAGATTTTGCTACTTGATGGGACCTCAATAAAAGAATTGCCCAAGAT GTTATTACACTGTGGTAACTTCAAAGACCAAGCAGTGTTGCAACAGTCACCTCGGAGGAATAGCTTATCCATGTTACTGC GTCTATGCTTGAGCAGAAACGATATGATATGCAGCCTACAAGATAGCATTAGTCAACTATATCACTTGAAATGGATAGAC TTAAAGTATTGCAAGAATCTCAAATCTATTTCAACGCTTCCACCAAATCTTCAATGCTTGGATGCACATGCTTGCTATTC ACTACAAACAGTAGGGAGTCCCCTGGCTATTATGCCAACGCAGCAGGTCCCCTCCTCATTCATTTTCACCAACTGTGAAA AACTGGATCATATCGCAAAGAATGAAATCATATGCTATGCTCACAATAAGAGCCATATGATTTCAAGTTCATTGAATCGG CACAAGAAGGGTTTTTCTTTTGAAGCTCTGGTTGCCACTTGCTTTCCTGGAAGTGAAGTTCCCGCTTGGTTTAGTCACAA AGCTTCTGGAGCAGTGTTACAGCCTGAGCTGCCAGGACACTGGAATGAAAGTGGGTTTGTTGGGATAGCTCTATGTGCTG TTGTCTCGTTTCAGGATCAAAAAGTTCGAAACAACAACCTCATGGTGAAATGCAAATGTCAATTCAACAATGTTGAGACA TCCTCAAGCTACTTTAACTGTCATGTTGGACGTTTATCAGAGACAGGCGACGAGCAATGCACGATTAAATCTACTCATGT ATTCATTGGCTACACCAATTGGTTAAATATCAACAAATGTCAAGAAGAAGATGGTGAGAAGAGATGTGTACCTACTAAGG CATCCATTAAATTTGAAGTGGCAGATGGCAGTGGTGAGGTTACAAATTTCGAGGTATTAAAATGTGGTTTTAGTTTAGTT TATGAATCTGGTTCTTGGGAGCCAAGCTCACAGATAGAGCGCTTGGAACAAGGTGAAAATAGATGGTGGGGACTCCTGGC AAGAATAAGAACGTTTCTTCACTTATGA |
| AA seq | Len:916 aa MPGIGKTALADMHFKKWHNRFVFTKNIKAIREESDDESGWLKDILLNGKELNEKAQMFNRKIFLVLDDVSHKNQVNFLLE NLEWIKKGSKIVITTRDKSSIAGLVQDTYVVPGLNDKEALELFKHHAFKEKVSSTKGNFPKLSKKFVDYAGGNPLALEEL GKELCGEEEPHWERRLVTLPHCCNPKILTELRISYDKLSDQQKDAFLDIACFFRSEEEDYVKCLLDPYGPESGEVVRDLA EKLFICISAGRIEMHNLLCTMGKQLGSSYEHKSGERMWSSDKITNTLRSEQVILNQKIKKVRGIFLDMSKVETGIPIDPK IFVEKFNKLTLRYLKIYDSLCPQKCEVDCKVNLPDGLEFPFKEIRCLHWLKFPLDELPPDFNPENLIDLRLPYSKIQRVW EAIKDTPWLKWVDLSYSTRLTDLSALSRAFYLRRLNLEGCSILEKLPKEMKNMKSLVFLNLRGCIMLSSLPEKLDLISLK TLILSGCSNFNNFELISENLESLHLDGTAIESLPRTMKSFKKLVLLNLENCKMLEFLPDCLDKLKALEELILSGCFRLQS FPDIKENMENLQILLLDGTSIKELPKMLLHCGNFKDQAVLQQSPRRNSLSMLLRLCLSRNDMICSLQDSISQLYHLKWID LKYCKNLKSISTLPPNLQCLDAHACYSLQTVGSPLAIMPTQQVPSSFIFTNCEKLDHIAKNEIICYAHNKSHMISSSLNR HKKGFSFEALVATCFPGSEVPAWFSHKASGAVLQPELPGHWNESGFVGIALCAVVSFQDQKVRNNNLMVKCKCQFNNVET SSSYFNCHVGRLSETGDEQCTIKSTHVFIGYTNWLNINKCQEEDGEKRCVPTKASIKFEVADGSGEVTNFEVLKCGFSLV YESGSWEPSSQIERLEQGENRWWGLLARIRTFLHL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |