Names & Information
Knowledge of BnaC02G0399300ZS:
| Gene Name | BnaC02G0399300ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: uncharacterized protein LOC104760394 isoform X2 [Camelina sativa] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:6912 nt ATGGTCGACTTTATCTGGGATATAAATCCAAAGGAAGCTGAAGCAAATTCAAGCAGAGATGACGATGTGAATCCCAGAAA GGATGACAATTTCATTGACTATGAAGGAAACACTGTTGTGACCTTTAATTTACAGAATTATGTTGAGAACAAGAGAGTTG AACCAGTCGTTGGTGAAAAGAAGCAAGAAAATGTAACTGAAAGCTCTACCATGGCGAAGCCCTTGCCAGAGCATAAAATG TTCATCAATTTCTGGGGAGACGACCTGCGTCATGGCTTTGTTGGCGACCTCGTCAAGGCCTTGAAAAAGGATGGAGTCTA TATAGATGTAGATGAGTTGCCGCGTGGAGATCTTACAGAACTTCTTGTGAATGGGATTAAGGAGTCGAGGATCGCACTCG TAATCTTCTCGAGCGGGTACGCAGAATCAAGTTGGTGCTTAAACGAGCTGCTGAAGATCAAAGAACTTATGGAAAGAGGG AAACTATTAGTCATTCCAATCTTCTACAAAGTGGAGCTATGGGAGGTTACACAACTAAAGGGTGATTTCGGGGTTAAATT TTGGAATTTGTGGCGTATTAATCGGGATAGCCATATCGTTAGCTGGAAGGAAGCTTTGGAGTCTGTTGCGTCCATGGAGG GGATCTATTTGAAGGAGCACAGTTCTGAGACCGAGTTCATCACTTTTGCCGTCAATGAAGTCCTAAAGAGAGTTTCTCTG TGGGAAGGAGAAAATCCATCTCTCTTTCCTTCGACAGAGAGAGGAAAAAGTACTGGATTGCCCATAGGGACAGGTGAAAA GCATAAAACTTATCAGAACAAACAGCACCTCTTTGGAATGGAACATCACATGGAGCAATTGGAGAAGAAGTTAGAGTTTG ACTGCGACAAAACTCGCATTATTGGAGTTGTTGGAATGCCTGGTATTGGTAAAACCACTCTCGCAGTGATGCTGCACGAG AAGTGGAACAGCCAGTTTATACGCTGTGTGCCTCTTCTAAATATCCGTAAGAAGTCAAACGACTATGGACCAGTGTGGCT GCGAAAGACTCTTCTGGAAGTTTTACTAGAGGGAAAGTTACCATTGATAAGTGACAAGACAACGCATGAATCTGTGAAGG ATATATTGCTTCATACTAAAAAGGGAAGCAAGATTGTTATTTCAACATGTGACAAGTCATTGCTTGATGGATGTGCTCAT GATACTTATGTAGTACCGGTATTGAATGATAGAGAGGCCTTTCAGCTCTTTAATTATCATGTCTTCGATGATAAAATCCG CAGTTCCACCAATACCTTCCTGACGCTCTCTAGAAAGTTTGTGGATTACGCTCGAGGACACCCACTTGCTCTCAGTTTAC TTGGTAGGGAACTTCGTGGGAAAGACCGGGATCACTGGGAACATAAATTGGCAACATTGACAAGTTCCAATATGATGTTC CAAGATGTCTGGAGATTTTCTACTGATCAACTTAATGAGCGGCAGAAAGATGTGTTTCTAGACATAGCGTGTTTCTTCAA CTCAGAGGATGAATATTTTGTTAGGAGTTTACTAGATTCAGGAGATCCTGACTCCATTGATACTGTGAGTGAAGTAAGAG ATCTCGCCAACAAGTTCCTGATTACAATATCTGACAGCCGAATAATTATGAATGATATGATGTATACGTTTGGCAAGGAC CTTGGTTCTCCTCGTTGGCTTAGGCTTTGGAACTACGAAGATTTCATCAACAAGTCAAAAACAATGGAAAAATCAAAGGT TAATAATGTAAGAGGTATTTTCTTAGACATGTCAAAGTTGAAGAAGAGCATCCACTTGGAAAGTTCGATTTTTATCAATA TGCTCAATCTTCGATACCTCAAGATATATGATTCTTGTTGTGCTCGGAAATGTATACCTAACCGCAAATTATACCTCTAC AATGGGATTAAATTCCCCTTGAAAGAGGTGCGTTGTCTTCATTGGGTGCAATTCCCGCTGGAAGAAATTCCACTAGACTT CAAACCAGAAAATCTTGTTGACCTGAGGTTGCCTTACAGCAAGATTGAACGTATTTGGAAAGGTGTTAAGGATACACCTC GGTTGAAATGGGTAGATCTGAGCTACTCACGTAAGTTGCTCGACTTGTCAGCATTATCAAAGGCTGAAAATCTTCGAAGT TTGAATCTGGGAGGCTGCACGAGTTTGAATGAGTTACCGGTGGAGATTCAGAATATGAAGTCTCTTGTTTTGCTCAACCT GAGAGGATGCATATGCCTTTCATCTCTTCCCTTGATGAATCTAATTTCTCTGAAAATTCTCATCCTTACTGGTTGCACAA GCCTCCAGAAATTTCAGCTAATCTCCGAAAGTCTAGAAGTTTTACATTTAAATGGTACTGCCATAAAGAGACTTCCTCCA ACCATAATCAAACTCCAGAGGCTCGTCTTATTGAATTTAAAGAACTGCAAAAGGTTGGAGTCTCTTCCTAATTGTATCGG AGATCTGAAATCTCTTGAAGAGCTAATACTTTCTGGCTGTTCAGGGCTTAAGAATCTTTCAGATGTAAGGGAGAGCCTGA AACATATCCAGAGTTTACTTATCGACAGGATAGGTGCAAAAGAGATGCCACTCATATCGTGTGTCAGTATTTTCAAAAGC CAAGCCTCTGCAGATATGGTCTTACAACCGTTTGACCCAAAGGAATGGCCACGTGGTCTTATTGGAGTATGCTCTCTTCG TCGGCTATGTTTAAGCGGAAATAATTTTGTCAGCCTGCAAACCGACATTGGGAAACTTTACAATCTACATTGGCTAGAAG TGAAGCAGTGCAAGATGCTGACCTCTATTCCAATGCTTCCACCAAATCTCCACTACTTTGATGCTCATGGCTGTGATTCA CTTGAAAGAGTTGCAAATCCTCTGGCCCTTCCAGGGCTGTTAGAAAAAGTCCATGCAATATTCATATTTTCAAGCTGCCA CAAGTTGGATCAAGACGCAAAGGATAATATCATATCTTATATTCGGTGGAGAAGTCAGTTGGTGTTAGAGGCACTCTCTC GATACAATGGGGGTTCTGTTTTGGAAGATTTCGGTGGAACTTGCTTTCCTGGATGGGAAGTACCAGCATGGTTCAGTCAC CAAGCCTATGGATCGGCGTTAAAGCCAAAGCTGCTTCCACACTTGTGTGATAACCGGTTTACTGGAATAGCCCTATGCTC GGTTATTGTACTTCCTGGCTATTATGAGCAGAGGAATCGTCTCTTGGTGAAATGTAATTGTGTGTTTAATAACGAAGATG GGTCTCGTATCCGCTTTAGTTGCACTATTGGCAGTTGGATCCCAAGTAACACACCACGGAAAAGTGAACTGCCTCATGTT TTTATTGGCTATATCAGTATGTTGGATATCAAGAAACATGTTGAGGAGGAAGATGAAGAGGAATGCAGTCATACAGAGGC TTCATTCGAATTCCAAGTGACAGATGGTACAGAAGTGTTAGAAGGTTGCGAGGTGCTAAAGTGTGGCTCCAGTTTGGTCT ATTCAACTGACGAAAGGACGAATATGAGTTGGTTTGCGAAGACTGGTGTAATTGCAGAGAGGATTAACAACATCCCAGGT CAATCAACATATTATGGTAACTCTGGAAGTCATGATGATATCCAGTATGAATCTTACTCTGGTCTAACTCTGGGAAGGGA TGAGACTTTCTTCAGTGAAGCGACTTTTGATGTTACCCCAAATTCACAGAAAAGTTATAAAAATAAGAAAGTGGGCCTAT TGAAAAAAGAGAGTGACGCAGGAGGAGACTTCACTGAAAGCTCTTTTCATGACAACATATCTTCGGCAAACGTAGAGAAG ATAAAAAGGCATCCCTTGGTTGGACTTGAACAGCGACTCAAGGAAATAGAAAAAGTTGTGTACTCAACACCAGGAAAAAC TCGTATTGTTGGTGTTCTTGGAATGCCCGGCACTGGTAAAACAACTCTAGCAAAAGAATTATTTGCAAAGCGTGGGTGTA AGTTTCCCAGTCACTTGTTTTTGCCAATGTCAACAGAGTGCAAACTGGAGCAGTTGAGGAGGGTATTCCTGAAAGAGTTA CTAAAAAACGTAAATCAAGACATAAACGACGAGACAACACATGATTCAATGAAGGGTAAACTGCTTCAGACTAAAGTTTT TGTTGTTCTAGATAACGTGAGTGACAAGAAACAATTAGAGTTTCTCCTCGGTGACCTTGGGTGGATTAAGAAGGGAAGCA AGATTGTTATTACAACATGTGACAAGTCATTGCTCAAGGGGTTGGGTCATGCTACCTATGTGGTCCCACAAATGAATAAC AAAGAGGCCTTTCAACTCCTTACTCATCATGCCTTCTATAATCAATTCCGTCCAGCAGAAACCTTCCTAACGCTTTCGAG AATGTTTGTGGATAATGTTGGAGGCAACGCACAGGATCTCAAGGTCCTGGGAAGCATCCTCTGTGGGAAAAATGAGGCCT ACTGGCAATATGAGCTGCTAAGAGTGAGACAGAGTTTCAATATGAAAATGACAGATATCTGGAGATTCTCTATTGATCAA CTTAATGAGCAACAGAAAGATGTGTTTCTTGACATAGTGTATTTTCTTAAATCTGAAGAAGAGTATTTTGTTAGAAGTAT ATTGGATCGAGGAAGTCATGAAGCTGTGAGTGGAGTAAGAGATCTCGCTGAGAAATTGCTTATTACTATTTCTTGTGGGC GAGTGGAGATGCATGATCAACTGTATTCACTGGCCAATGACCTTGGCCTTCCTGGGCGGCATAAGCTTTGCAACTACGAA GATATCAACAATCTGCCAAAACTGAAACAACAGGAAGCTAAGAATGTGAGAGGTATTCTCTTAGATATGTCTGAAATAAC GGAGAGTATTGCCTTGGAACGTGTGACCTTCTCTGATATGCGCAATCTTCTATACCTGAAGATATACAATTCTTGTTGTC GTCGGCACTGTAGAGCTGACTGCAACTTATACTTCCCTGATGGACTTGACTTCCCCTTGGAAGAGGTCCGATATCTCCAT TGGGTGAAATTTCCTTTGCATGAACTTCCACAAAACTTCAGACCTGAGAGTCTTGTAGACCTGAGCCTTCCTTACAGCAA GATTGAACGTGTTTGGGAAGGTGTTAAGGATACACCACGGTTGAAGTGGGTAGATCTACGCCACTCAAGTAAGTTGCTCG ACTTGTCGGCATTGTCAAGAGCTGAAAATCTTGAAAGATTAAATCTGGAAGGCTGCACGAGTTTGGATGAGTTGCCAGTG GAGATCCAGAATATGAAGTCTCTTGTTTACCTGAACATGAAAGGATGCACACGTCTTTGGTATCTTCCGAAAATGAATTT AGTCTCTCTGAAAACTCTCATCCTCAGTGACTGCCTAAACCTAAAAGAATTTCAGGTCATCTCCGAAAGTGTAGAATATC TACATTTAGATGGCACATCAATGGAAGGACTTCCTCCGGCTATACAGAACCTCCAGAGACTTGTTGTATTAAATTTGAAA AACTGCAAAATGTTGGAGTATCTTCCCAACTGTTTGGGCAATCTAAAATTTCTTGATGAGCTAATAGTCTCTGGTTGTTC AAGGCTCAAAAATCTTCCAGATGTCCGGAATAGCTTAAAACAGCTCCAGATTTTACTTTTTGATGGGACGGGAGCGAACG AGATGCCAAGCATATCGTGCTTCACTGGATACGAAGGGCCTGCTGATAATTTCTTACAACCTTTTGGGTCATATGCCACC GTGAGGGAATGGGCTTGTGGTGTTAATGGAGTATCCTCACTACGACATCTATGTTTGAGTGGAAATACGTTTGTCAGCCT GCAGCCTGACATCGTAAAACTTTATAATCTAAAATTGCTTGATGTGAAGCAGTGCAAGAAGCTGAGGTTTGTTCCAACGC TTCCACCTAGACTTCAGTTCTTTGATGCACATGGCTGTGATTCACTGGAAAGAGTTGCAAACCCTCTGGCCCTTCCTTTG TTGTCTGAGCAGATCCATGCCAAATTCAATTTTTCCAACTGCAACAAGTTGGATGAAGACGCAAAGGATAGTATCATATC CTATTCTCGGTGGCGAAGCCAGTTAGTGCTAGATGAACTCACTCGTTACAATGAGGGTTCTACCTTGGAAGCGTTTACTG GAACTTGCTTTCCTGGATGGGAAGTACCGGCATGGTTCAGTCACCGAGCCTTTGGACCGGTGTTAAAGTCAAATCTGCCT CCACACTGGAGTGACAATAAGTTAACTGGAATAGCCCTTTGTTCTGTTATCTCATTTCCTGACTACCATGAGCAGAGGAA TCCTCTCTTAGTGAAATGTACTTGTGTGTTCAATAATGAATATGAGTCTCGTATCCGCTTTAGTTGCATTATTGGCAGTT GGAGCAAATCAAGTAACACACCAGGAAAGATTGAAGCGTCTCATGTCTTTATTGGCTATACCAGTACATTGGATATCAAG AAATATGTTGAGGTGGAAAATGAAGAAGGATGTAGTCATACTGAGGCTTTGTTTGAATTTCAAGTGACTGATGGTACAAA AGTGTTAGAAGGTTGTGAGGTGCTGAAGTGTGGCTTTAGTTTGTACTATGCAACCGATGAATTGCGGATAAAATCTACTG TCAGTGGCCCTCTTGAAGCAAATCAGTACATATCGTATTCAGAAAACGTGACAATCTCGAATGTAAGACCGGAGAGCGGA ACAGAAGAGAGATCACCAGCGCAAAGAACCGCTACCAGTTACCAACCACCGACCACTGAGTCTCGTGTATCTCCTCATGT GTATGGAACATCGGATATGGACCCCCTGTTGTCTGGGGAACCCCAACAATACAGAGCCGACCTTGTAAACTTCTTTTTTT TTTCTTTAAATCTTTATAAGAAAAGAAATTAA |
| AA seq | Len:2304 aa MVDFIWDINPKEAEANSSRDDDVNPRKDDNFIDYEGNTVVTFNLQNYVENKRVEPVVGEKKQENVTESSTMAKPLPEHKM FINFWGDDLRHGFVGDLVKALKKDGVYIDVDELPRGDLTELLVNGIKESRIALVIFSSGYAESSWCLNELLKIKELMERG KLLVIPIFYKVELWEVTQLKGDFGVKFWNLWRINRDSHIVSWKEALESVASMEGIYLKEHSSETEFITFAVNEVLKRVSL WEGENPSLFPSTERGKSTGLPIGTGEKHKTYQNKQHLFGMEHHMEQLEKKLEFDCDKTRIIGVVGMPGIGKTTLAVMLHE KWNSQFIRCVPLLNIRKKSNDYGPVWLRKTLLEVLLEGKLPLISDKTTHESVKDILLHTKKGSKIVISTCDKSLLDGCAH DTYVVPVLNDREAFQLFNYHVFDDKIRSSTNTFLTLSRKFVDYARGHPLALSLLGRELRGKDRDHWEHKLATLTSSNMMF QDVWRFSTDQLNERQKDVFLDIACFFNSEDEYFVRSLLDSGDPDSIDTVSEVRDLANKFLITISDSRIIMNDMMYTFGKD LGSPRWLRLWNYEDFINKSKTMEKSKVNNVRGIFLDMSKLKKSIHLESSIFINMLNLRYLKIYDSCCARKCIPNRKLYLY NGIKFPLKEVRCLHWVQFPLEEIPLDFKPENLVDLRLPYSKIERIWKGVKDTPRLKWVDLSYSRKLLDLSALSKAENLRS LNLGGCTSLNELPVEIQNMKSLVLLNLRGCICLSSLPLMNLISLKILILTGCTSLQKFQLISESLEVLHLNGTAIKRLPP TIIKLQRLVLLNLKNCKRLESLPNCIGDLKSLEELILSGCSGLKNLSDVRESLKHIQSLLIDRIGAKEMPLISCVSIFKS QASADMVLQPFDPKEWPRGLIGVCSLRRLCLSGNNFVSLQTDIGKLYNLHWLEVKQCKMLTSIPMLPPNLHYFDAHGCDS LERVANPLALPGLLEKVHAIFIFSSCHKLDQDAKDNIISYIRWRSQLVLEALSRYNGGSVLEDFGGTCFPGWEVPAWFSH QAYGSALKPKLLPHLCDNRFTGIALCSVIVLPGYYEQRNRLLVKCNCVFNNEDGSRIRFSCTIGSWIPSNTPRKSELPHV FIGYISMLDIKKHVEEEDEEECSHTEASFEFQVTDGTEVLEGCEVLKCGSSLVYSTDERTNMSWFAKTGVIAERINNIPG QSTYYGNSGSHDDIQYESYSGLTLGRDETFFSEATFDVTPNSQKSYKNKKVGLLKKESDAGGDFTESSFHDNISSANVEK IKRHPLVGLEQRLKEIEKVVYSTPGKTRIVGVLGMPGTGKTTLAKELFAKRGCKFPSHLFLPMSTECKLEQLRRVFLKEL LKNVNQDINDETTHDSMKGKLLQTKVFVVLDNVSDKKQLEFLLGDLGWIKKGSKIVITTCDKSLLKGLGHATYVVPQMNN KEAFQLLTHHAFYNQFRPAETFLTLSRMFVDNVGGNAQDLKVLGSILCGKNEAYWQYELLRVRQSFNMKMTDIWRFSIDQ LNEQQKDVFLDIVYFLKSEEEYFVRSILDRGSHEAVSGVRDLAEKLLITISCGRVEMHDQLYSLANDLGLPGRHKLCNYE DINNLPKLKQQEAKNVRGILLDMSEITESIALERVTFSDMRNLLYLKIYNSCCRRHCRADCNLYFPDGLDFPLEEVRYLH WVKFPLHELPQNFRPESLVDLSLPYSKIERVWEGVKDTPRLKWVDLRHSSKLLDLSALSRAENLERLNLEGCTSLDELPV EIQNMKSLVYLNMKGCTRLWYLPKMNLVSLKTLILSDCLNLKEFQVISESVEYLHLDGTSMEGLPPAIQNLQRLVVLNLK NCKMLEYLPNCLGNLKFLDELIVSGCSRLKNLPDVRNSLKQLQILLFDGTGANEMPSISCFTGYEGPADNFLQPFGSYAT VREWACGVNGVSSLRHLCLSGNTFVSLQPDIVKLYNLKLLDVKQCKKLRFVPTLPPRLQFFDAHGCDSLERVANPLALPL LSEQIHAKFNFSNCNKLDEDAKDSIISYSRWRSQLVLDELTRYNEGSTLEAFTGTCFPGWEVPAWFSHRAFGPVLKSNLP PHWSDNKLTGIALCSVISFPDYHEQRNPLLVKCTCVFNNEYESRIRFSCIIGSWSKSSNTPGKIEASHVFIGYTSTLDIK KYVEVENEEGCSHTEALFEFQVTDGTKVLEGCEVLKCGFSLYYATDELRIKSTVSGPLEANQYISYSENVTISNVRPESG TEERSPAQRTATSYQPPTTESRVSPHVYGTSDMDPLLSGEPQQYRADLVNFFFFSLNLYKKRN* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |