Names & Information
Knowledge of BnaC02G0408800ZS:
| Gene Name | BnaC02G0408800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC02g32310D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:3342 nt ATGTCTTCTTCTTCATCGTCTTGTGATTGGGTATACGACGTCTTCCCGAGCTTCAGAGGAAAAGATGTCCTGAAATGCCA AGAAGAGTTAAGTCAAATAGTTATACCCGTTTTCTACGAGGTTGATCCTTGTCATGTCAGACATCAGACTAAAGAGTTTG GAGAGGTCTTTAAGAAGACATGCCTGAGAAAAACAGAGGACGAGATACAACTATGGAAGAAAGCTTTGACCGATGTTGCA AATCTTGTCGGATATCATTCTCAAAACTGGGAAAACGAAGCAACAATGATTGAAGTAATAGCCAATGATGTTTTGGGTAA ATTGAATTTAAATCCGTCTAAGGATTTCGAGGACTTTGTCGGGATCGAAGATCATATGGAAAAGATGAGTTCACTTTTGT GCTTGGAATCCAAGGAAGTGAAGATGATTGGGATATGGGGTCCTTCCGGAATTGGCAAGAGTATTATTGCAAGAGCACTA GAATCTCGACTCTCTCGTCACTTCCATGGTAAAGTTTTCATAGACATGCGTTTCATATCCAAGAGTAAGGAATGTTATCG CAAAGGTAACTCAGATGATATTAACATGAAGCTGCACTTGCAAGAAAACTTCCTTTCTAAGATATTAGATAAGGAAGGGG TAAAAGTAGATACCTTAAATGCCGTGAGAGAGAAGCTAAAGCGCCAAAAAGTTCTTATATTTATCGATGATTTGGATGAT CCGGTGGTGTTAGATGCGTTGGCTGGTGGAGACGAATGTTTTGGTCCTGGGAGTAGGATAATTGCAATTACAAAAGATAT GCAGATACTAAGGGCCCATCGGATTACATGTGTTTACAAGGTTGAAACCCCATCTAAAGAAATAGCGCTTCAGATGTTAT GTCGATCTGCTTTCAGACAAGATTCTCCGCCTGATGGGTTCATGGAGGTTGCGTCTGAAGTTGCAATGCGTCTAGGTGGT CTTCCTTTGGGACTTAACATTATAGGTTCGGCCTTGAGGGAAAGGGACAAAACTCATTGGGTAAATATGTTGCCAGCTCT TCGGAAAGGTCTAGACGGAAGAATTGACGAAGCACTAAGCTTCAGCTACAAATCATTAGAAAGAAAAGAATATAAAGCAT TGTTTCGTCACCTCGCGTGTCTTTTTAACGGTGATGAAGTCAGTTACATCAAGTTGATGCTTGCAGATAGTGAGTTGAAT GTTGACATGGGTCTTGAAGTTTTAGTTGATAAGTCCCTCATACGTGTGGTACCATTTTGGAATAATACGAACATCGTGGA GATGCACTGTTTAGTACAAGAAATGGGTAAAGAAATTGTTCGTGGACAATCTGACAAGCCTGGAGAACGAGAATTTCTAA TGGATTCAAAGGATGTTTGCAATGTTCTTAAAGATCGTACCGGTACTGAAAAGCTTATAGGTATATCAATGGACTTAGAT GAAATTGATAAGGTGAAGATACATGAGAAGGCTTTTAAAAGGATGAGTAATCTCCGTTTTCTAAAATTCTATAAAAGGTC ATTGCAACCGAAGAAAGAAGTTAGATGGCAAACACCCAAAACACTCAATGATTTTCCGGATGAACTCAAGTTACTAAGTT GGCCAGGATATCCTATGGAATGCATGCCTTCTAAATTTTGTCCTGAATATTTGGTTGAACTCAGTATGCCTAACAGCAAG CTTAAAAAGCTATGGAAAGAAGTTGAGGAGCTTACATACCTGAAGGATATGGATTTGTCAGGATCTAAAAGCCTGAAAAA GATTCCAGATCTTTCAACGGCGACCAATCTTGAGACATTGAATCTTCATGGTTGTTCAAGCTTGGTGGAGCTTCCCTCTT CTATTCAAAGTCTCAATAAACTGACGGATTTGAACATGTCTGGATGCACAAATCTGGAGACACTTCCAAATGGAGCCAAC CTGAAATCTCTAGTTCGCCTCGTTCTCAATGGTTGCTCACAGTTGAAGGTTTTCCCTGATATTTCGAGTAAAATAGAATC CATCATTGCAAACAAGACAGCTTTTGAAATTTTCCCTTCTAAATTGCGTCTTGAGAATCTTGTTGAACTTCGCATGGAGC ACAGCATGAGTCAAAGGTTATGGGAGGGAGTTCAGCCTCTTACAAGCCTCACAAAGATAGTGTTGTCCGGATCACAAAAC CTGAAAGAAATCCCAGATCTTTCACTGGCAACAAGTCTAGAGACACTAAATCTCAATGGTTGCTCTAGTTTGGTGGAGCT AACTTGTTCATTCATTCAGAATCTTAATAAACTAACCACCTTGGAAATGACAGGATGCTCAAGTCTAGAGACTCTACCAA CTGGCATCAACTTGAAATCTCTCTACCGCCTCAACCTCAATGAATGCTCGCAGTTGAAGAGTTTCCCTGATATCTCAGAT AACATCTCCACCCTCTATCTAAACCAAACGGCGATAGAAGAAGTTCCTCGATGGATCGAAAACTTCTCCAAACTTGAATC CTTGGAAATGTGGAAATGCAAAAATCTAGCGACTCTTCCAACTGGCATCAACCTAAAATCTCTCTATCGTCTCAATCTCA GTGGATGTCCACGGCTGAAAAGTTTTCCAGATATCTCAAGCAATATCTCCAATCTTTATCTTAACCAAACAGCGATTGAA GAAGTCCCTCCATGGATAAATAACTTTTCTAGCCTTGAAGCCCTGGAAATGTGGGAATGCAGACAGCTAAGATGCATCTC ACCAAACATCTTCAAACTTGAAAATCTTGGCGAGATTTTCTTCTCGGACTGCGAGCAATTGTCTGAAGTTAGCTTTCTAG ACTTTCCACTGGAGGAAGCAGAAGACACCAGTAATACTTGCACTAAGTTGTCATTGATAAGTTTCACCAACTGCATAAAT TTGAATCAAGAAAACCTCATTCAACAATCAGCTTCCAAGTATCTGATCTTACCAGGTGTTGAAGTGCCCCCTTACTTTAC GCACAGATCTGCTGGGAGCATCTTTAACATCCCTCTACATCATTCTTCTCTTTCTCAACAACCAGTCTTCAACTTCAAGG CTTGTGTCGTGGTTTCTGATGTCGATGCGGTTACTGAAGGAACAGAAACCGCCGACCATCATCTTTGCTTTATAGACATT GAGGTAAATTGCCGGTTTAAAGACAGCCACGGGAACTACTCTGGGTCAACAGAGTCAATAGATTTCTCCTTACCTCAAGA GTATGATCATCTGATTATATTTGACTGTCCTTTCCGTCAAAACCAAGACAGTGGTGAATCGAATTGCGAACAAGTTGAGA TAGAGTTTAGTCTTGTTAGTACAGGGCTCAGACTAATAGGATGTGGTTTAAAACGCCAATGA |
| AA seq | Len:1114 aa MSSSSSSCDWVYDVFPSFRGKDVLKCQEELSQIVIPVFYEVDPCHVRHQTKEFGEVFKKTCLRKTEDEIQLWKKALTDVA NLVGYHSQNWENEATMIEVIANDVLGKLNLNPSKDFEDFVGIEDHMEKMSSLLCLESKEVKMIGIWGPSGIGKSIIARAL ESRLSRHFHGKVFIDMRFISKSKECYRKGNSDDINMKLHLQENFLSKILDKEGVKVDTLNAVREKLKRQKVLIFIDDLDD PVVLDALAGGDECFGPGSRIIAITKDMQILRAHRITCVYKVETPSKEIALQMLCRSAFRQDSPPDGFMEVASEVAMRLGG LPLGLNIIGSALRERDKTHWVNMLPALRKGLDGRIDEALSFSYKSLERKEYKALFRHLACLFNGDEVSYIKLMLADSELN VDMGLEVLVDKSLIRVVPFWNNTNIVEMHCLVQEMGKEIVRGQSDKPGEREFLMDSKDVCNVLKDRTGTEKLIGISMDLD EIDKVKIHEKAFKRMSNLRFLKFYKRSLQPKKEVRWQTPKTLNDFPDELKLLSWPGYPMECMPSKFCPEYLVELSMPNSK LKKLWKEVEELTYLKDMDLSGSKSLKKIPDLSTATNLETLNLHGCSSLVELPSSIQSLNKLTDLNMSGCTNLETLPNGAN LKSLVRLVLNGCSQLKVFPDISSKIESIIANKTAFEIFPSKLRLENLVELRMEHSMSQRLWEGVQPLTSLTKIVLSGSQN LKEIPDLSLATSLETLNLNGCSSLVELTCSFIQNLNKLTTLEMTGCSSLETLPTGINLKSLYRLNLNECSQLKSFPDISD NISTLYLNQTAIEEVPRWIENFSKLESLEMWKCKNLATLPTGINLKSLYRLNLSGCPRLKSFPDISSNISNLYLNQTAIE EVPPWINNFSSLEALEMWECRQLRCISPNIFKLENLGEIFFSDCEQLSEVSFLDFPLEEAEDTSNTCTKLSLISFTNCIN LNQENLIQQSASKYLILPGVEVPPYFTHRSAGSIFNIPLHHSSLSQQPVFNFKACVVVSDVDAVTEGTETADHHLCFIDI EVNCRFKDSHGNYSGSTESIDFSLPQEYDHLIIFDCPFRQNQDSGESNCEQVEIEFSLVSTGLRLIGCGLKRQ* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | TIR domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |