Names & Information
Knowledge of BnaC02G0475200GG:
| Gene Name | BnaC02G0475200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA02g32570D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein RDL5 OS=Arabidopsis thaliana GN=RDL5 PE=1 SV=1 |
| NT seq | Len:2511 nt ATGGGAGGTCTTGGTAAAACCACACTCGCAAGACAAGTTTATAATCATGAGACGATAAAAAGTCATTTTCTAGGAGGATT AGCGTGGGTTTGTGTTTCGCAACAGTTTGAAAGGAAGTGTGTCTGGCAGACAATCTTGCAACAACTCAGGTCAGAATGCG ATGTGTCAAAGATGATGGAAGGCGAACTTCTGAAAGAGATTGTTCGAGTGCTGGAAACACAAAAGGCTTTGATCGTCATT GATGATATATGGAGAGAAGGAGACTGGGACCTAATCAAGCATGTGTTTCTGCCAAAAAAAGGCTGGAAGGTATTACTTAC TTCTCGCAATGAGGAAGTGGGATTACATGCAGACAGACAATGTGTTAACTTCAAACCAGAATGCCTAACTTTTGAAGAAA GTTCGGATCTTTTTCAAAGGATAGCATTTCCTATTAAAGACACAGCTGAATTTAAGATTGAAAAAGACATGAAAGAAATC GGTATGGAGATGATTAGACATTGTGGAGGTCTACCACTGGCTATTAAGGTGTTAGGGGCGTTGTTAGGTAAGAAATACGC ATTGCATGAGTGGAAAAGGATACGTGAGAACATTAAAGCTCCGACCGTTAGAGGGAGTGGGTCTGACGACAGAAATTTCA ATTTGAAGGTTTACGGTGTTTTGTATCTGAGTTTCGAAGAGCTGCCTGCCTATTTGAAGCAGTGCTTCCTTTACCTTGCT AGTTTTCCAGAAGATTATGAGATACATACGAAGAAACTTTCCTATTACTGGGCTGCAGAAGGAATACTAAGGCCAATGGA TTTTGATGGAGCGAGCATTCGAGAGGTTGTAGATGGATACATAGAAGAATTGGTTAAGAGAAACATGGTTATTTCTAAAA GAGACGTTGATACTTCAAGATTTAAAACACTTCAGTTGCATGACATGATGAGAGAGGTTTGTTTACGCAAAGCTGAAGAA GAGAATTTCGTACAAACCATTTGCAGATCAACTGCAAATTCGAAATCTCCTTGTAAATCTCGCAGACTTGCTGTTGTACG TTTGCGTGAAGAAAATTTTAATGTCGATAAGGAGGTGAAGAATCCAAGCCTTAGAACTATCTTGTTTATCGAGTGCATAA TATGGAAGGCAACAAGTTTATTGTTTACAAGTCATAAGCTGATGAGAGTGTTAGATCTCTCTGAGGCCGATTTTGAAGGA GGGAAGGTACCGTCTAGCATCGGGAAGCTCATCCACTTGAGATATCTAAGTTTATATGAGACAGGTGTAACTCAACTGCC TTCTTCTATGCGGAATCTGAAGAAGCTTCTCTATTTAAACCTAGCTGTGTATGGTGAAGTCCACATCCCCAATATCTTGA ATGAGATGCGAGAATTGACATTCTTGTGGTTGCCAAAGAGATTACATGATAAGACAAAGTTGGAATTGGGAAATCTGGTC AAGCTGGAGACGTTGAAGAATTTCAACACAAAGCACGGGAGATTGACGGATCTACAGGGTATGACACGGCTCAGATCTCT CTCTATCTCTATTACAAACGAGAGTTGTACCACGAAGACTCTATCTTCATCTCTAAGTAAACTTTCACGCCTGGAGAGTC TTACTATAGATAACAAGAACAAGTTTTATAATCCCACGAATGATGATGAAGAAGGATTTGTTTGGGATTTTGTTAATCTC AAACAGCTGTGGTTGGAGATATATATGCCAAGGTTACCTGATGCACAACACTTTCCTTCTCACCTTAAAGCCATTAAGCT AACTTTTTGTCGTTTGAAGGAGGATCCAATGCCGATTCTAGAGAAGTTGCTTCACTTGAAAGAGATTTGTTTACAATTTC GATCTTTCAGTGGGAGAAGAATGGAATGCTCAAGGGATGGGTTTCCTCAACTGCAGAAGCTAGAATTTAGGGGATTAGAG GAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCCCTTCTCCATACTCTCAGAATTGACGATTGCAGAAAATTAAA GGAGCTTCCTGATGGGCTGCAAATAATCACTAACTTGGAGGACCTGATTGTTTGTAATATGGGAGATGAGTTCAATTTGA GATTGTCGGAAGGATACTTGCCTTCTCACCTTACAACCATATCGCTAAGTGGCTGTCGTTTGACAGAGGACCCAATGCCT ATTTTAGAGAAGCTTCTTCACTTGAAAGATGTTAGTTTAGATTATCGATCTTTCTGTGGGAGGAGAATGGTTTGCTCGAG GGGTGGGTTTCCTCAATTGCAGAAGCTACAATTCAAGAGATTAGAGGAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCA TGCCCCTTCTCCATACTCTCATAATTTACTATTGTCCAAAGTTAAAGGAGCTTCCTGATGGGCTGCGATTCATCACTTCT TTGAAGTGTCTGGTTTTTTATAATATAGGGAAGAGATGGGAGAAGAGACTGTCGAAAGGAGGAAAAGATTATTACAAAGT CCAACACATCCCTTCTGTTACAATTCTATGA |
| AA seq | Len:837 aa MGGLGKTTLARQVYNHETIKSHFLGGLAWVCVSQQFERKCVWQTILQQLRSECDVSKMMEGELLKEIVRVLETQKALIVI DDIWREGDWDLIKHVFLPKKGWKVLLTSRNEEVGLHADRQCVNFKPECLTFEESSDLFQRIAFPIKDTAEFKIEKDMKEI GMEMIRHCGGLPLAIKVLGALLGKKYALHEWKRIRENIKAPTVRGSGSDDRNFNLKVYGVLYLSFEELPAYLKQCFLYLA SFPEDYEIHTKKLSYYWAAEGILRPMDFDGASIREVVDGYIEELVKRNMVISKRDVDTSRFKTLQLHDMMREVCLRKAEE ENFVQTICRSTANSKSPCKSRRLAVVRLREENFNVDKEVKNPSLRTILFIECIIWKATSLLFTSHKLMRVLDLSEADFEG GKVPSSIGKLIHLRYLSLYETGVTQLPSSMRNLKKLLYLNLAVYGEVHIPNILNEMRELTFLWLPKRLHDKTKLELGNLV KLETLKNFNTKHGRLTDLQGMTRLRSLSISITNESCTTKTLSSSLSKLSRLESLTIDNKNKFYNPTNDDEEGFVWDFVNL KQLWLEIYMPRLPDAQHFPSHLKAIKLTFCRLKEDPMPILEKLLHLKEICLQFRSFSGRRMECSRDGFPQLQKLEFRGLE EWEEWIVEEGSMPLLHTLRIDDCRKLKELPDGLQIITNLEDLIVCNMGDEFNLRLSEGYLPSHLTTISLSGCRLTEDPMP ILEKLLHLKDVSLDYRSFCGRRMVCSRGGFPQLQKLQFKRLEEWEEWIVEEGSMPLLHTLIIYYCPKLKELPDGLRFITS LKCLVFYNIGKRWEKRLSKGGKDYYKVQHIPSVTIL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | disease resistance protein RPP8-like; K13457 disease resistance protein RPM1 (A) |