Names & Information
Knowledge of BnaC02G0487300ZS:
| Gene Name | BnaC02G0487300ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC02g38690D [Brassica napus] |
| Best Hit (SwissProt) | Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3 |
| NT seq | Len:3582 nt ATGGCTTCTTCTTCTTCTACTACTACTTCTCGCAACTGGACGTACAATGTTTTCCCGAGCTTTCGTGGAGAAGATGTCCG AAACACATTCCTCAGCCATCTTCTCATGGAACTTGAACGCAACTTGATCACTACATTCATCGACCATGGCATCGACAGAA GCCGCCCTATCGGACCTGAGCTTTTACTGGCGATAAAAGACTCTAGGATCTCAATCGTCATCTTCTCTAAGAACTACGCC TCGTCAACATGGTGTTTGAACGAACTGGTGGAGATCCACAATTGCCTTAAGGATCTGGATCAGATGGTCATACCGATTTT TTACCATGTCGATCCCTCTGAGGTTAGAAAGCAGACTGGAGAATTCGGCGAGAGGTTTAAAGAAACATGCAAAGACAAAA CAGAAGGTGACAGAGAAAGGTGGATTCGAGCACTTGCTGATGTAGCAAATTTGGCCGGAGAGGATTCTAAGAATTGGACT GTTGAAGGCGAAGCAAAAATGATTGAGCATATAGCAAAGGATGTGTTCAATAAACTTATGATACCATCAAATGATTTTAG TGACATTGTGGGGATTGAAGCTCATTTTGAGAAGTTGAATTCGCTTTTGTGTTTGGAGTCTGAGGAGGTTATGAAGTTAG GAATTTGGGGGCCTTCAGGGGTAGGTAAGAGTACTATAGGAAGTGCTCTTTTTAGTCTACTCTCTAGCCGATTCCACAAA CATGCTTTCTTCGTCTCTTACAAGCGTAAAAAAAAGTGGGATGATAATAAAATGAAGTTGTGTTTGGATGAACGACTTCT GTCGGAAATTTCATGTCAAAAGGACGTAAAGATACGTCATCCAGGTGTGGCAAAACAAACGCTAATGCATAAGAAAGTTC TTATCATCGTTGATGATGTGGATGATGTTGAAGTGCTAAAGACCTTGATGGATCAAACTAGTTTGGTTGGATCCGGGAGC AGAATCGTTGTGATAACTCCAGATAGGAAACTTTTAAAGTCTCAAAAGATTGAGCTTATTTATGAGGTGGAGCTCCCATC GTATGATCTGGCTATGCAGATGTTCTGTCGATCTGCGTTTGGGAAAAACTCTCCGCCTTATGGTTTCGAAGAACTCGCAG AGGAAGTTGTACTGCATTCAAGTAATCTCCCTTTAGGTCTAAGTGTCTTGGGTTCGTCGTTGAAAGGGATGAACAAGGAG GAGTGGGTGAAGATGCGGCCCAGGCTCCTGAATAGTTTGGATGGTAAAATCAAGAATACACTAAAAGTATGCTATGATAG GTTAGATGTCAAAGAGCAAGAATTGTTCCTTTGGATTGCATGCTTATCCGATTGTCGTAACGTCAATTTCTTAAAAGACT TGCTTGGAGATAGTGCTGAAATTGGGCTCAAAATACTGAATGACAAGTCCCTAATACGTTGGGAATCAACAGAATTTGTT GGAATGCACAGTTTGTTACAGATGTTGGGTAAAGAAATCGATCGTGCAGAGACCATCAACAATCGTAGGTTCTTGACGGA ACTTGAGGATACATGTGATGTACTTACCGATAATACTGGCCCAAAGAATACTCTAGCCATGTACTTGAACATGTCAGAAA TCAACGAGGAATTGTTTATAGATAAAAATTCATTTCGCGGAATGCATAATCTGAAACTTCTAAACTTTTACAAATCCTTG TGGTCAAGGGAGACTGGAAAAGGCAGACTGTATTTACCTGATCGAGGCCTGAATTATTTTCCACGCAAACTCAGATTTCT ACGTTGGGATGAATATCCATCCAAGTGTATGCCTTCTCACTTTAGAGTGGAAAGTCTGGTTGAACTTAGAATGGAGTATA GTAAGCTTGAGAAGTTGTGGGAAGGAACTCAGTTTCTTGGAAGTCTGAAGGAGATGGATATGAGTTATTCTGCAGATTTG AAAGAGATTCCAGATCTTTCAAAAGCCATAAATGTCAAGGAATTGAAGCTTTGGGGATGCTCATCTTTGGTGGCTCTTCA TTCCTCAATTGGGAATCTCAGTAAAATGTATGGATTGAGGCTTTCGGGATGCACATCTTTGGTGACATTACCTTCCTCGA TTGGGAATCTCAGTAAACTGTCTGAATTGGACATGTCGAAATGCTCAAACCTTAACTTTCTGCCAGCTGATGTCGACTTG GAATCTCTTGAAGTCCTCAATCTTAACGGATGCTCAAAGTTGAGAACGTTTCCTCGTATATCAAGGAACATTACATCGCT TTACTTAGAGGAAACTGCATTAGAAGGAGAAGAAGATAGTTCTTGGATTGAGAATATCCCTCACCTTAAAGAACTTTATT GGGATGATGTACCACTGAGTTGTATGCCACCTAATTTCAACCCAGAAGATATGGAGTACCTTGTTATGAGTAGTGGCAGG CTTAAGAAGTTATGGGGAGGGGTCAAGTCGCTTGGAAAACTCTGGGGGATGCATTTGTCAGGATGTGAAAGCCTCGTTGA AATTCCAGATCTTTCAATGGCCATCGGCCTTAGGTATTTGGAACTCAAAAATTGTAAAAGCTTGGTTATGCTTCCTTCTT CAATTAGGAATCTCTACCAACTCAAGCGCTTGAACATGGAAGGATGCACAATGCTCGAGGCTCTACCAGTCGACATCAAC TTGGTTACTCTTAAAGAGCTCTATCTCAGCGGATGCTCAAAACTGAGAATTTTTCCTCAGATTTCAACCAGCATTGTACT TCTCTATCTAGATGACACTGTGATTGAAGAAGTTCCTTCCTGGATTAAGAACATGTCTCGTCTCAAGAAACTAACGATGC GTCGGTGCAAGAATTTAAAGAACATATCCGCAGAGATTTTTAAATTGGAATGTGATAAGGCAGACTTTTCAGACTGTGGA GGAATCACAACAATCTGTGACCACTTACCAGGACGGCCACACAATGATGTCTTTGATATGTCTTCATATATTTCTTTCAG ATTTCCGCAAGTGGCTCCTTTCAAGTTCCATAATTGCTTCAATTTGGATCAAGATGCACAGGAAATCATTATACAATCAT ACCGAAACATGGCCGTTATACCAGGTGGAGAAGTGCCTATGTATTTCATGCATCGAGCTTGTGGAAGTTCCCTAAGTATC CTTTTGTCTGAGAGCTCTCTTTCTCAAGAATATATATTACTTAAAACTTGCATCGTGGTTGGACCTTCAAGACACTACCC CGCCAGATTAACAGTTCGTCAGTCCTTTCGAGGCCAAAAAGAAGAGATTCCTTGTGATGTTCTAGTGGACACATGCACGT ACAAGATGGATCATCTGGTTTTGTTCATCTTACATTTACAAATAAAACGAGTGGATGACTCGCCATCTGAACCGAACAAC AACGTTCTACTACTTGAGTTTTATAAAAGCCATTATGATGGATATTATGAAGGGTGTTCCTGCGGCAGCAGCTTTGGCGG CCACAAACAAAATCCTACCCTTGAAGAGATAAAAGGATGCGGTGCACGAGTCATGAATATCTCAAAAACAGACGACGAAG AAAGTGATGAAGAGAGCAACAGAAGCAAGAAGAAGATGCGGGTTAGCTTTATCATATATTGA |
| AA seq | Len:1194 aa MASSSSTTTSRNWTYNVFPSFRGEDVRNTFLSHLLMELERNLITTFIDHGIDRSRPIGPELLLAIKDSRISIVIFSKNYA SSTWCLNELVEIHNCLKDLDQMVIPIFYHVDPSEVRKQTGEFGERFKETCKDKTEGDRERWIRALADVANLAGEDSKNWT VEGEAKMIEHIAKDVFNKLMIPSNDFSDIVGIEAHFEKLNSLLCLESEEVMKLGIWGPSGVGKSTIGSALFSLLSSRFHK HAFFVSYKRKKKWDDNKMKLCLDERLLSEISCQKDVKIRHPGVAKQTLMHKKVLIIVDDVDDVEVLKTLMDQTSLVGSGS RIVVITPDRKLLKSQKIELIYEVELPSYDLAMQMFCRSAFGKNSPPYGFEELAEEVVLHSSNLPLGLSVLGSSLKGMNKE EWVKMRPRLLNSLDGKIKNTLKVCYDRLDVKEQELFLWIACLSDCRNVNFLKDLLGDSAEIGLKILNDKSLIRWESTEFV GMHSLLQMLGKEIDRAETINNRRFLTELEDTCDVLTDNTGPKNTLAMYLNMSEINEELFIDKNSFRGMHNLKLLNFYKSL WSRETGKGRLYLPDRGLNYFPRKLRFLRWDEYPSKCMPSHFRVESLVELRMEYSKLEKLWEGTQFLGSLKEMDMSYSADL KEIPDLSKAINVKELKLWGCSSLVALHSSIGNLSKMYGLRLSGCTSLVTLPSSIGNLSKLSELDMSKCSNLNFLPADVDL ESLEVLNLNGCSKLRTFPRISRNITSLYLEETALEGEEDSSWIENIPHLKELYWDDVPLSCMPPNFNPEDMEYLVMSSGR LKKLWGGVKSLGKLWGMHLSGCESLVEIPDLSMAIGLRYLELKNCKSLVMLPSSIRNLYQLKRLNMEGCTMLEALPVDIN LVTLKELYLSGCSKLRIFPQISTSIVLLYLDDTVIEEVPSWIKNMSRLKKLTMRRCKNLKNISAEIFKLECDKADFSDCG GITTICDHLPGRPHNDVFDMSSYISFRFPQVAPFKFHNCFNLDQDAQEIIIQSYRNMAVIPGGEVPMYFMHRACGSSLSI LLSESSLSQEYILLKTCIVVGPSRHYPARLTVRQSFRGQKEEIPCDVLVDTCTYKMDHLVLFILHLQIKRVDDSPSEPNN NVLLLEFYKSHYDGYYEGCSCGSSFGGHKQNPTLEEIKGCGARVMNISKTDDEESDEESNRSKKKMRVSFIIY* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |