Names & Information
Knowledge of BnaC02G0500600ZS:
| Gene Name | BnaC02G0500600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA02g31380D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=3 SV=1 |
| NT seq | Len:2235 nt ATGAGCGTTTGGTTAGGGAGAGGTTTCCTCTCTAACTCTAACCTTCTGGAAACTTTGATTTTCGCAGCTAAGATTTCCAC AGACTTCAAACCTTTGTCCGAAGATCTCGCATCAACTTTGGAGAGATTAATTCCTCTGTCGGAAGAGATAGAATCTTTCC AAGGGAAACTAGACTTTGCTTATGGGGATCTCAAGGAACTTGTTGATACTCTCTTTCGAGCTCGTGAAGTGGTTAACACC TGTATAGAAGGCGTCTCTTGGTTCCAGAAACCTATCCTCACAAGAGAGATTCAGCGAATCGTTAATGATATGCTCAAGTT CTCTCGGACTGAGCTACACTTTCTTCAGTTCAGGACCCTGGACGATGGTGGTTTATGTAAGAGAATTGACTGCTTCAGTG TTCCTGTTTATACGGATCTATGTTCTGTTCCCCTGCCTGACAAGGATCTCCTTGGATTTGATTACCCCTTGATGGAGCTT AAGAAGAAGCTCCGTGATGATTCCGTGGGTTGTCTTGTGGTGTGCGCTCCTCCCGGTTGCGGCAAGACCACGCTCGTTGC TCAGCTTTGCCACGACCAAGAAATCAAAGGTATAAGAATGTTCAAACATATCTTCTATTGGGTTACTTCAAGAACCCCTA ACTTGAGGGTCATGGTACAGCATCTACTCCTGCACAACGAATCCTTGCTTAAGACGTTTCAGATTAACCTACAAGATTAT AAGATTTTGGTCACTTCTCAGTTTGAGTTTCCCAGTTTTGGTCCCACTTATCATCTGAAACCTTTGGAACATCAAGATGC CAAGAACCTTCTCATTCAGCTTGCATCGCCACTGCCTCATCACACAAATCCATATGAGTTTGAAGATCTTCTTCAAAAGA CGTTGAAACGTTGCAATGGACTACTCCCGCTTGTGATTGAAGTAGTCGGTGTTTCCCTTAAAGGACGAGGTCTACATTTA TGGAAAGACCAAGTCGAAAGCTGGTCTGAAGGGAAAACAATTCTAGAACGTCCGCAGCCTAGCTTCAATGCCCTGGAACC TCATCTTAAAGAGTGTTTCATGGACATGGGCTCGTTTCTTGAGGACCAAAAGATACGCGCTTCGGTAATAATTGACTTAT GGGTGGAACTATACGGTACTAGTAGTAGTAGTATTGTGTACATGAAGTACCTCAATGACCTTGCTTCCCAGAACTTGCTT AAACTTATTCCTCTCGGGTATGTTTATTTATCTGTCAACATTGTTTCTTTGCTCCCTATCTTAGTCCACTTTGATGAACT TGTTTATGTACTACTTACCAGGAGAAGTGAGCAGGAAGACGGATTCTACAATGGGCTCTTAGTCACTCAACATGATGTCT TGAGGGAGCTGGCTATCCATCAAAGCCGATTGGAATCAATCCTGGAAACAAAAAGACTCAAGTTGGAGATCATAAAGAAC AAATTTCCAGAGTTGTATTCGAATCTAAGGCAGCCTATTAATGCTCGTCTCTTGTCTATCGCCACAGATAATTTGTTCTC ATCGAGTTGGATTCAAATGGATTGCCCCAACGTTGAGGTTTTAATTCTAAATCTTTCTTCATCAGACTATGCATTACCAA GCTTCATTGCTGGAATGAAGAAGCTAAAGGTTTTGACCATCGCAAACCACGGTGTTTCCCTTGCAAAGATAACAAACTTC TCCTGTCTCAGCTCATTGCCAAACCTGAAACGGATCAGGTTTGAGAAAGCTTCAGTCACTTTGCTGGACCTTCCCCAATT GCGACTTGGCAGTCTCGAGAAGATATCTTTTGTTATGTGTAGTTTCGGTGAGGTTTTCTATGACTGTGTTGATGTTGATA TCTCTAAAGCTCTTCCTAGCTTACAGGAGATTGAGATAGACTATTGCTACGACCTCGATGAGGTGCCGTATTGGATATCT CAAGTTGTTTCGTTGAAGAAACTTAGCGTCACGAACTGTTACAAGCTTTCTAGACTTCCAAATGATATAGACAACTTGAG TAAACTAGAGGTGTTGAGGCTGGCTTCTTGTTTTAATCTCTGCGAGCTTCCTGAAACGACTAGCGAACTCAGAAATTTGC GGTTTCTGGATATTTCTCATTGCACGGGGTTGAGAAAGCTGCCTCTAGAGATTGGGAAGCTGCAGAAGAAGCTGAAGAAG ATCTCGATGAGCAAATGTTGGAGATGCGAATTGCCTGGTTCAGTGGTAAATCTAGAGAATCTGGAGCAGATATGA |
| AA seq | Len:745 aa MSVWLGRGFLSNSNLLETLIFAAKISTDFKPLSEDLASTLERLIPLSEEIESFQGKLDFAYGDLKELVDTLFRAREVVNT CIEGVSWFQKPILTREIQRIVNDMLKFSRTELHFLQFRTLDDGGLCKRIDCFSVPVYTDLCSVPLPDKDLLGFDYPLMEL KKKLRDDSVGCLVVCAPPGCGKTTLVAQLCHDQEIKGIRMFKHIFYWVTSRTPNLRVMVQHLLLHNESLLKTFQINLQDY KILVTSQFEFPSFGPTYHLKPLEHQDAKNLLIQLASPLPHHTNPYEFEDLLQKTLKRCNGLLPLVIEVVGVSLKGRGLHL WKDQVESWSEGKTILERPQPSFNALEPHLKECFMDMGSFLEDQKIRASVIIDLWVELYGTSSSSIVYMKYLNDLASQNLL KLIPLGYVYLSVNIVSLLPILVHFDELVYVLLTRRSEQEDGFYNGLLVTQHDVLRELAIHQSRLESILETKRLKLEIIKN KFPELYSNLRQPINARLLSIATDNLFSSSWIQMDCPNVEVLILNLSSSDYALPSFIAGMKKLKVLTIANHGVSLAKITNF SCLSSLPNLKRIRFEKASVTLLDLPQLRLGSLEKISFVMCSFGEVFYDCVDVDISKALPSLQEIEIDYCYDLDEVPYWIS QVVSLKKLSVTNCYKLSRLPNDIDNLSKLEVLRLASCFNLCELPETTSELRNLRFLDISHCTGLRKLPLEIGKLQKKLKK ISMSKCWRCELPGSVVNLENLEQI* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | aquaporin TIP2-1-like; K09873 aquaporin TIP (A) |