Names & Information
Knowledge of BnaC02G0554000ZS:
| Gene Name | BnaC02G0554000ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC02g16530D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=3 SV=1 |
| NT seq | Len:2466 nt ATGAACGCTGTGGCTGACTTGGCATCAGGTTCTTTCGGGGGAGCTTTGGTCTCGGAGGCTCTGAAACTTGCCATCGCCGA GGCAAAGAAGTACAAATCATTCAAACCCCTGTCCAAGGATCTCGTCTCCACGATGACCAGATTGCTTCCCTTGACCCAAA AGATCGATTCCCTGCGAGACAAGCTAGACCACAGTTCCGGAGAGCTACATGAACTCAGGGATACCATCGAACAAGCTCAT CTACTGATTCACAAGTTTCAGAGCGTCCGGTTTTACAATAAACCCAAATACGCCAGAAAAATCGAGAGGATCAATAAAGC TATGGTCAAGTTCTGTGGCATCGATCTCCAGCTTCTTCAGTTTAGGGACCAGTTGGATCTGTCCCTTGTGGTGGAGGGTT TGGGTAAGAGAATGGACAGCTTGAGTGTTGCTCCTGCACTGCCTTTTTTTACGGATCATCTTTGCTCTGTTCCAAAGCTT GATAAGTCCCCCTCCCCCGTTGGGTTGGACTGGCCTTTGATGGATCTTAACAAGAGATTCATTGACAATCCTAATGTGGA TACTCTCGTGGTCTCTGCTCCTCCCGGGTGCGGCAAGACCACCCTCGTTACTCACCTTTGCAACAATGCACACGTCAAAA GGCATTTCAAGCATATCTTGTTTAATGTTGTCTCAAGTACTCCTAACTTCAGGACCATTGTACAGAATCTACTCCAGTAC AACGGTCACGCTCCCCAAACGTTTGAGAACGATACTCAAGCAGCCGTTGCCTTGAGAAAACTGCTGGAGAAACTCATTGA AGACGGTCCTGTACTGCTGGTGTTGGATGATGTCTGGCAGGGAGCTGATTCTTTCCTTGAGAAGTTCCGTATTAGCATTC TGGGTAACTATAAAGTTTTGGTGACTTCTAGGTCTGAGTTTCAGAGCTTTGGCCCCACTTATTATCTGAAACCTTTGGAA TATGAAAATGCAAGAGCCCTTCTCGTTCAATGGGCATCACCGCGTAACAACGCCTCTCCAGATGAGTACGAACATCTTCT CAAAAAGATATTGAAACGTTGCAATGGATTCCCAATCGTAATTGAAGTAATTGGCCGTTCACTCAATGGAAGATCTCTAA ATACATGGAAAGGGCAGGTGGAAAGCTGGTCTCAAGGGGAAACAGTTCTTGATAGTCCTCCTCAGCCTACTGTGCTTGAA TGTCTCCAGCCTAGCTTCAATGCCTTGGAACCCACTCTTCAGAAGTGTTTCATGGACATGGGCTGCTTTCTTGAGGACCA AAAGATACGCGCTTCTGTCCTAATTGACATATGGATGGAACTATACTGTAAAAGTAGGAGTAGTAGCAGTACCGTGTGCA TGAAGTACCTTGAAGACCTTGCCTCCCAGAATCTACTTAAACTTGTTCCTCTCGGAAATGAGCAGGAAGAGGGTTTCTAC AATGAGTATTTAGTCACTCAACATGATATCCTCAGGGAGCTGGCTATCCATCAAAGCGGATTAGAAGCATTCTTGGAAAG AAAAAGATTAAATTTGGAGATAAGAGAGGCTCAATTTCCAGACTGGTGTTTGAATCAAATGGAACCTATTATCATCAATG CCTCTCTCTTGTCTATCTCTACAGATGATTTGTTCTCATCGAATTGGATTGAAATGGAATGTCCCAATGTCGAGACTTTG ATTCTCAACATCTCTTCACAAAACTTTGCATTACCGAGCTTCATTTCTGGAATGAAGAAGCTAAAGGTTCTGATAATCAC AAACCACGGTTCTTATCCAACAAGACTGACCAGATTCTCGTGCCTCAGCTTATTACCAAACCTGAAACGGATCAGACTGG AGAAAGTTTCAGTCACTTCGCTGGACATTCTCCACTTGCTGCTCGTCAGTCTGAAGAAGTTGTCTTTGGTTATGTGTAGC TTCGGTGAGGTTTTCTACGACATTGAAGATGAAACAATAGATGTCTCTAGAGCTCTTCCTAGTTTACAGGAGATCGACAT AGACTATTGCTACGATCTTGATGAGTTGCCGTATTGGGTCTGTGAAGTTGTTTCGTTGAAGACACTTAGCATCACGAACT GTAACAAGCTCTCTCTACTTCCTGAGGCTATAGGAAACTTGAGTAGTCTACAAGTGTTGAGGCTGAGTTCTTGTATTAAT CTCTCTGAGCTGCCTGAAACGGTGGAGAGACTCGGGCAATTGCAGTTTCTGGATATTTCGCATTGCTTAGGACTGAGAAA GTTGCCTCTAGAGATTGGGAAGCTGCAGAAGCTGAAGAAGATGTCGATGAGGAAATGTTGGAGATGCGAGCTGCCGGACT CAGTGAGGAGTCTAGAGGGCCTGGAGGTGAAATGCGATGAAGAAACTGGGTTGGTCTTGTGGGAAAGGTTGAAGCCGAAA ATGAGAAGCTTGAGAGTTCATGTGGAGGAAATAGAGCATAATCTGAACTTACTTCATATGTTTTAA |
| AA seq | Len:822 aa MNAVADLASGSFGGALVSEALKLAIAEAKKYKSFKPLSKDLVSTMTRLLPLTQKIDSLRDKLDHSSGELHELRDTIEQAH LLIHKFQSVRFYNKPKYARKIERINKAMVKFCGIDLQLLQFRDQLDLSLVVEGLGKRMDSLSVAPALPFFTDHLCSVPKL DKSPSPVGLDWPLMDLNKRFIDNPNVDTLVVSAPPGCGKTTLVTHLCNNAHVKRHFKHILFNVVSSTPNFRTIVQNLLQY NGHAPQTFENDTQAAVALRKLLEKLIEDGPVLLVLDDVWQGADSFLEKFRISILGNYKVLVTSRSEFQSFGPTYYLKPLE YENARALLVQWASPRNNASPDEYEHLLKKILKRCNGFPIVIEVIGRSLNGRSLNTWKGQVESWSQGETVLDSPPQPTVLE CLQPSFNALEPTLQKCFMDMGCFLEDQKIRASVLIDIWMELYCKSRSSSSTVCMKYLEDLASQNLLKLVPLGNEQEEGFY NEYLVTQHDILRELAIHQSGLEAFLERKRLNLEIREAQFPDWCLNQMEPIIINASLLSISTDDLFSSNWIEMECPNVETL ILNISSQNFALPSFISGMKKLKVLIITNHGSYPTRLTRFSCLSLLPNLKRIRLEKVSVTSLDILHLLLVSLKKLSLVMCS FGEVFYDIEDETIDVSRALPSLQEIDIDYCYDLDELPYWVCEVVSLKTLSITNCNKLSLLPEAIGNLSSLQVLRLSSCIN LSELPETVERLGQLQFLDISHCLGLRKLPLEIGKLQKLKKMSMRKCWRCELPDSVRSLEGLEVKCDEETGLVLWERLKPK MRSLRVHVEEIEHNLNLLHMF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | disease resistance protein RPM1-like; K13457 disease resistance protein RPM1 (A) |