Names & Information
Knowledge of BnaC03G0086500ZS:
| Gene Name | BnaC03G0086500ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC03g08660D [Brassica napus] |
| Best Hit (SwissProt) | Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2 |
| NT seq | Len:4056 nt ATGAGTTGCGAGAAGAATAGTCACAGCGTCAACATCATCTGCTCGGAGACGGTACGGTACTCCTTCGTCAGCCACCTCTC CGGCGCTTTACGCCGCCAAGGCATCTCTGTGTTTGTGTTTGCGGGTACAGATGGGCTGGAATCTTATTCCTTCCCCGATG ATCAGAATCAGGAAGCTAGGGTTTCGGTGGTGGTTTTCTCCGAGACCTACGCGTCTTCTGGTCGTTGGTTTGCTAAGCAG CTCGAGCTTCATAAGAAGAATGGCTACGTAATTGTTCCAGTGTTCTACGGCGTTGACCCATCGGTTGTGAACCGAGATCT CGAATTTCTGGGAACAATGAAGAGAGACGGAAACTTAACACGCCATCCATCAAGCGACTCGGAGCTTGTGGAAGAGACCG TGAGGAATGTTTTTGCGAAGCTCTCTCCTACAGAACGAATTGGAATATACTCGAGGCTACTGGAGATTGAAAACCTGCTT TGCGAGCAACCTTGGGACATCCGAAGCTTAGGAATCTGGGGCATGCCTGGCATAGGGAAGACGACACTTGCTAAAGCACT ATTTGAGCAGATTCACATTGACTACGACGCTTCTTGCTTTATCGAAAACTTTGATGAAGCTCTTTATAAGGCGGGACCTC AACGTTTACTGGAAGAGCAAATTTTCAAGGTTGTGATGGAAAAGTTTGGAGCGAGCACTTCTTACATTACAAGACTGAGC CTCCTTAAGGACAAGCTTTGCGATACAAGGATTCTTCTTGTTCTTGATGATGTGCGTAATCCTCTAGTTGCAGAGTCCTT CCTTGCAAGGCTTGATTGGTTTGGTCCCGGAAGTCTGATAATCGTAACCTCCAGATATAAACAAGTGTTTTCCCTTTGTC AGGTAAATGACATATATAGGGTTCAGGGTTTAATCGAGCAGGAGGCTCTGCAGCTATTCTCCCAAACTGTCTTTGAAAAA GATGTGCCAGAGCAGAATGACCAGGAACTATCATTGAAGGTGATTGACTACGCTAATGGAAACCCATTAGCTCTCCGTGT TTATGGCCAAGAGCTGAAGGGGAAGAAGTCAGAAATGGAGGCTACATTCCTCAAGCTCAAGCAATGCCCTCCACAGAAGA TTCAGGATGGGCTAAGGAGTGTTTATAGTGCGCTTAGTGACAACGAGAAGCACATCTTCTTGGACATTGCTTGTTTCTTC AAAGGAGAGAATGTCGACTATGTGGCGCAGCTGCTTAAAGGGTGTGGTTACTTTCCTCGTGCTGGAATAGATATTCTTGT GGAGAAGTGTCTGGTGAATATTTCAGAAAACACATTGCAGATGAATGACCTGATCCAAGACATATTCAGAGAAATCATTG TTGTAGATAGAATACAAATGAAGAAGTGCGCCACTATGTGGCAACCTTCCAGCATTAGATATCTACTAGAAGATGATGAA CTCAATGGAGATGACCAACTGAAAGAAACTCCTAAATGTGTTATGGTCGCTGAAGACATCAAAGGCATATGTTTGGACGC ATCAAACATGATATTTGATGTCAAACCTGATGCCTTCAAGACTATGGTCAGTCTAAGGTTCCTGAAGATATACAATTCCC AGTCTGAAAACATTCATGGACACAAATTTCCCAAGGGGCTCAGTTCTCTGCCTAGTAATCTAAGGCTCCTTCACTGGGAG GAATATCCCTTCAAATCCTTGCCTCAAGCTTTTGACCCACGGGAACTTGTCGAACTCAGTATGTCTTACAGTCAGCTTAA GAAACTCAGGGCAAGAACCAAGAACCTCAAGATGTTGAAAAGGATCAGGCTTTGTCATTCCCAGCAGCTAGTTGAATTTG ATATACTTTTAGATGCTATAAATATCGAGCTAATTGATCTCCAAGGTTGCACAAGATTGCAAAGTTTCCCAGACACGAGT GAATTACAACATCTCAAAGTTGTAAATCTCTCAGGTTGCACAGAAATCAAAATTTTCCAAGGGGCTCCACCAAATATTGA GGAACTACATCTCCAAGGAACCAGTATAAGAGAAATACCAATTTCCATGGTGACCCACTACCCCCAGAAAGTTAAGCTGA ACCGCCAAAAGTTTTTAAATCTTTTAGAAAACTTCCAGGATGTTGAGCATATGGACTTGGAGAGTGTAACAGAGCTGGTT AAAGTAAGCTCATATAATCAAGGTTTTGGCAAGCTTGTACACTTGAACATGAAAGATTGTTGTCATTTGCAAAGTCTTCC TGACATGGTCAGTCTAGAATCTCTCCAACTTCTTCTTGTGTCTGGCTGCTCAGAGCTCGAGGAAATTAAGGGTTTCCCTA GAAACATGAAAAAGCTATATCTTGGTGGAACCGCCGTACGAGAAGTGCCACAGCTTCCCCAAAGTCTAGAATTCTTGAAT GCTCATAATTGCTTGTATCTGCAGTCTATTCGTTTGGACTTCGAGAAGTTTCCTAGGCACTACATCTTCAGTAATTGTTT TAACTTTCCTCCACAAGCTATCACTGAGTTCCTGGAGAAAGATCTTACAATAGTATCAAACATAGCCGGAGCAAAAAAAC AGGAACACATCAAAGCATCTGAAGTCACCATTTGTATTCCTTTAGATGCATGTCAAACATCTCACTTTCTCTTGCAAGCA GGCCCAATTGTAACGATAGATTTAGCTCCTTGGACGGGGAAACCTATCTCTGGCTTTACTATGACTGTTGTGGTATCATT TCAGGATGATTACCACAATACTGTAGGTCTTGGGATTAGGTGCATATGCACATGGAAGGCCAAGAGTGGCTACTCGAAAA TAACACAGAGGATATTTCAGTGTTGGACTCCGACGGAAGCTCCAAAAGTTGATTTGGATCACATATTTATCTTCTATGAT ACCGAAATGCATCCTAGTGGTGAAAAACACCCCAATTTGTGGGATGAAGAAGTTAAATTTGAATTCCACACAGTGAGTTG GGAAAAAAAGCTTTTAGGTGCTAATTGCCAGGTCACCTTTTGTGGTGGCAGGATAATTACGGCTCCAATACCTACTGAAA TCACAACAGAAAGTGACGATGATTCATGGGTTCTTGTAGAGGGTCCTCCAACAGTGCTAGAGGCAAAGAGCCCAACTCCA CTTTCATCCAACGAGCCATTGTTTTGGCTTGAGCGTGCTGTTGGCTGGGGCCATAAGTTTAGACTGAGAGATCTTGAAAT GGCAACTAATGGATTCTCAAACGAAAATTTTATTGGTGAAGGCGATTGCGGGGTTGTTTACAGAGGAGAGTTTTTAGACA GTACTCCTATTGCAGTTAAAAGGATTATAAAAAAATTGGACCAAGGAGGAGAGGAAGAATTTATCTGTAAAGTTAATGCA GTCGGTCGTTTGTGTCACAAGAACATAGTCCGTCTTCTTGGATATTGCATTGAAGGCACATACAGAATATTGGTTTACGA GTATGTGAGCAACGGAAACTTGGAAAATTGGCTTCACGGAGAAAAAAAACAACATGGATATTTAACTTGGGAAGCAAGGA TGAAGATTCTCATCGGTACATCAAAAGCTCTTGCATTTATACATGAAGCAAACGAATTTCACAGAGACATCAAGCCAAGC AACATACTGATCAACGACGAATTCGAAGCAAAAGTTTCATATTTAGGACTTGACACGTCAGAAACACGAGCGATGGGAAC ATTAGGATACGCTGCTCCAGGATTTTTAAGCACAGGGATATTCTATGAAAAAGACGATGTATATAGTTTCGGTGTTGTGC TCTTAGAAGCAATCACAGGACGTCCTGCTCGTGAGGTAAAGCTAGTGGAGTGGTCGAAGATGATGGTTAGAAAAAGGCGA TCAAAAGAAGTACTTGATCCAAAGATAGAGGTTAGGCCGCCTGCGCGAGCACTGAAACGAGTTCTTTTGTTAGGTCTACG TTGTGTTGATCCAGATATAGTCAAGCGGCCAAAAATGAGTGAAGTTTTGTTTTATATGCTTGAGTCTGAGGAATATCCCA CTCCCATTCGAGGAGAAACAACAGGTTGTTGGAACTCGTTTTGCATAAACCGGTGA |
| AA seq | Len:1352 aa MSCEKNSHSVNIICSETVRYSFVSHLSGALRRQGISVFVFAGTDGLESYSFPDDQNQEARVSVVVFSETYASSGRWFAKQ LELHKKNGYVIVPVFYGVDPSVVNRDLEFLGTMKRDGNLTRHPSSDSELVEETVRNVFAKLSPTERIGIYSRLLEIENLL CEQPWDIRSLGIWGMPGIGKTTLAKALFEQIHIDYDASCFIENFDEALYKAGPQRLLEEQIFKVVMEKFGASTSYITRLS LLKDKLCDTRILLVLDDVRNPLVAESFLARLDWFGPGSLIIVTSRYKQVFSLCQVNDIYRVQGLIEQEALQLFSQTVFEK DVPEQNDQELSLKVIDYANGNPLALRVYGQELKGKKSEMEATFLKLKQCPPQKIQDGLRSVYSALSDNEKHIFLDIACFF KGENVDYVAQLLKGCGYFPRAGIDILVEKCLVNISENTLQMNDLIQDIFREIIVVDRIQMKKCATMWQPSSIRYLLEDDE LNGDDQLKETPKCVMVAEDIKGICLDASNMIFDVKPDAFKTMVSLRFLKIYNSQSENIHGHKFPKGLSSLPSNLRLLHWE EYPFKSLPQAFDPRELVELSMSYSQLKKLRARTKNLKMLKRIRLCHSQQLVEFDILLDAINIELIDLQGCTRLQSFPDTS ELQHLKVVNLSGCTEIKIFQGAPPNIEELHLQGTSIREIPISMVTHYPQKVKLNRQKFLNLLENFQDVEHMDLESVTELV KVSSYNQGFGKLVHLNMKDCCHLQSLPDMVSLESLQLLLVSGCSELEEIKGFPRNMKKLYLGGTAVREVPQLPQSLEFLN AHNCLYLQSIRLDFEKFPRHYIFSNCFNFPPQAITEFLEKDLTIVSNIAGAKKQEHIKASEVTICIPLDACQTSHFLLQA GPIVTIDLAPWTGKPISGFTMTVVVSFQDDYHNTVGLGIRCICTWKAKSGYSKITQRIFQCWTPTEAPKVDLDHIFIFYD TEMHPSGEKHPNLWDEEVKFEFHTVSWEKKLLGANCQVTFCGGRIITAPIPTEITTESDDDSWVLVEGPPTVLEAKSPTP LSSNEPLFWLERAVGWGHKFRLRDLEMATNGFSNENFIGEGDCGVVYRGEFLDSTPIAVKRIIKKLDQGGEEEFICKVNA VGRLCHKNIVRLLGYCIEGTYRILVYEYVSNGNLENWLHGEKKQHGYLTWEARMKILIGTSKALAFIHEANEFHRDIKPS NILINDEFEAKVSYLGLDTSETRAMGTLGYAAPGFLSTGIFYEKDDVYSFGVVLLEAITGRPAREVKLVEWSKMMVRKRR SKEVLDPKIEVRPPARALKRVLLLGLRCVDPDIVKRPKMSEVLFYMLESEEYPTPIRGETTGCWNSFCINR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0004672 |
| Pfam | TIR domain |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |