Names & Information
Knowledge of BnaC03G0117000ZY:
| Gene Name | BnaC03G0117000ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaCnng59870D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=1 SV=1 |
| NT seq | Len:4032 nt ATGGCGACCTACGAAAAACCACAGGTGTCCCCACCACAGGTGTTCCTCAATTTTCGAGGAGCCGAGCTGAGGCAGAGCTT TGTCGCTCACCTGGAGATGGCCTTGATAAAGAGCGGAGTCAACGTCAGAAACGATGGAAGGATGATGATACGGGGTGTTG AAAATTTATTCCAACAGATCGAGGAGTCGACAATTGCGCTCGTGATCTTCTCGAAAAGCTACACCGAATCGAGGTGGTGC TTAGACGAGCTGGTGAAGATTAAAGAGCTGGTGGAGGAAGGCAAACTCATTGCGATTCCCATTTTCTACGAGGTGAGTCC ATCCCATGTGAAGGAGCTTGACGGAGATTTCGGACTTAACTTGTGGAATCTAGGGAATCGTACTAGTGATTTCGACAGGC TCAAGAAATGGAAGGAAGCTTTAGATTTCATTTCCTCAAAGATGGGGCTCGTGTTCAATGAGAAAAGAAACGAATCTATC TTTATCCATGAAATCGTCAAGCAGGTCCAAAGGACTCTGACCAGTCTTGGCGTCCGAAACCCTGTTAGTAGTGCTGATTG CGATAGTGTTGGCTCACTCCAAGAAGAAAAGAAGCAAGAAAGCGAAAGCCAAAGCCAAAGCTCAAGCTCGACAGACCCAA AGCATCAAGTGTTCATCAATTTCCGGGGAGCCCAGCTGCGTCATAGTTTTGTCAGCCATCTCGTGGACGCCTTGGAAAGG CACGGAGTCAGCTTCTTCGTAGATGCAAACCAGTCGAAGGGTGAAAAACTTGAAAAAATTTTCAACAGGATCGAGGAGTC TAAGATCGCACTCGTTGTCTTCTCTACCGGTTACACAGAATCGGCTTGGTGCTTACAAGAGCTGGTGAAAATCAAAGAGC TCATGGACGAAGGCAAACTCGTGGCCATCCCAATCTTTTACAAGGTGGAACCATCCCAAGTTAAGAATCTGACTGGAGTT TTCGGTGAAAGCTTTTGGAATTTGTGGCGTATTCAACGGGATAGCCATATCATTAAATGGAAGGAAGCTTTCAGGTCTAT TGCGTCCAAGTTAGGCTTCAACTTGAGCGATCACGGTGGTAATGAGAGTGAGTTCATCACTCGTATCGTCGAAGAAGTCC TACATCTTCTGTCGCAGCGGCAAGGAGAAAACCCGTCTCTCGTTCCTTCCACAAAGAAACCAAAGCTTACTGAATCGCCC ACCACAGCAGAAAAGCATGAAACGTATCACAACGTTGGAATGGAGCAATTGGAGGAGAAGTTAGAGTTTGATTCCAATGA TACTCGAATTATTGGAATTGTTGGGATGGCTGGTATTGGCAAAACCACCCTCGCAATGATGCTGCACGCAAAGTGGAACC GCAACTTTCTACGCTGCGTTCCTTTTCTGGATATCCGTAACAAGTCAGAGGAGCATGGCCCAGTGTGGCTGCGAACGACA CTCCTGGAACTTTTACTTGAGTGTAAAATAGGTGACGAGTTAACACATGGGTCTGTCAAAGCTGAACTACTCAAGACCAA GTTCTTCGCTCTTCTGGATGACGTGAGCGACAAGGCACAGTTAAAGTTTCTCCTCGGTGAACGCGACTGGATTAAGAAGG GAAGCAAGATTATTATTACAACACGTGACAAGTCATTGCTTGAGGGATTTGCTGATGATTCTTATGTGGTTCCAGGATTG AACGATGATGAGGCCTTTCAACTCTTTAAATATCACGCCTTCAGTGATAAACTCTGTAGTCCCACTAGTACCTTCCTGAG GCTCTCTAGAATGTTCGTGGATTACGCTCGAGGACACCCATTGACTCTCACATTACTAGGTATGGAACTTAATGGGAAAG GTGCGGATGGATGGGTGTCCAAATTGGAAATGGTGACACAAAGATCCAGTGTTATGTTTGCTAATCAACTTGAACTTAGC GAGAAGCAGGAAGATATGTTTCTCGACATAGTGCACTTTTTTCAATCAGAGGATGAGTATTTTGTTAGGAGTTTACTAGA TTCGGGAGATCCTGATTCTACTGATGCGGTGAGTGAAGTAAAAGATCTCGTCAACAAATTCCTGATTACAACTGCTGACG GCCGAGTAGAAATCAACGTTCCACTATATACGTTCTGTACCGACCCTGGTTCTCCTCGGTGGCTTAGGCTGGGGAACTTT GAAGATATCATGAAGGAGCCAATGAAAATGAAAAAAACAGATGCCAAGAATGTAAGGGGTATTTTCTTGGACACGTCAAA GTTAGAGAAGAGCATTTGCTTGGACATCTCAACCTTCACTGATATGCGCAATCTTCGATACATGAAAATATATGATTCTT GTTGTTCTCGGCGATGTAAAAATCAAGACTGCAAATTATACTTCCCCGATGGGCTTGAGTTCCCCTTGGAAGAGGTTCGA TATCTCCACTGGGTGAAATTTCCATTGGATGAGCTTCCACCGGACTTCAGACCGGAGAATCTTGTTGACCTTAGGCTGCC ATACAGTAACATTACACGTGTTTGGGAAGGCGAAAAGGATACACCACGGTTGAAGTGGGTAGATCTAAGCCACTCGAATG AGTTGGTCGACTTGTCAGCATTGTCAAAGGCTGTAAATCTTCAAAGACTAAATCTGGAAGGCTGCACGAGTTTGGAGGAG TTGCCGGTGGAGATTCAGAATATGAAGTCACTTGTTTTCCTGAACCTAAGAGGATGCATAAGTCTGTGGTCTCTTCCGGA GCTGAATTTAAGCTCTCTGAAAACACTCATCCTCAGTGATTGCTCAAACCTCGACGAGTTTCAGCTAGTTTCAAAAAGTG TAGAATTTCTTCATTTGGATGGCACAGCAATCAAAGGACTTCCTCAGGGTATAGAGAACCTCCAAAGGCTTGTCGTGTTG AATTTGAAAAACTGCAAAATGTTGGAGTGTCTTCCCAACTGTCTGAGCAACCTGGAAGCTCTTGACAAACTAATACTCTC TGGTTGTTCGAAGCTTAAGAATCTTCCGGATGTCAAGAATAGCTTAAAACATCTGCAGGTTTTACTTTTTGATGGGACAG GAGCAAAAGAGATGCCAAGCATCTCATGCTTCACTGGATCCGAAGGCCCAGCGTCTGGAGATGTGTTCTTACAAACTCTA GGATCGCATTGCAGCGTGAGAGAATGGCCATGCGGTGTTAACGTAGTATACTCACTGCGGCGACTGTGTTTGAGTGGAAA TGATTTTCTCAGCCTGCAACCTGATATTTGGAAACTTTATAATCTGAAATGGCTCGATGTGAAGCAGTGCAAGAAGCTGA GATCTATTCCAATGCTTCCACCAAGACTTGAGTACTTTGACGCACATGGTTGTGATTCCCTTGAAAGAGTTGCAAAACCT ATAGCCTTTCTGATGTTGTCTGATCAGAGCCATGCCACATTCAATTTTTCCAACTGCAACAAGTTGGATCGAGATGCAAA GGATAATATCGTATCTTATACCCGGTGGAGAAGCCAGTTAGTGCTAGGTGAACTCACACTATGCAGTGGGGGTTTAGTTT CAGAAGCACCGATTGGAACTTGTTTTACTGGATGGGAAGTCCCTGCCTGGTTCAGTCACCGAGCCTACGGATCGTTGTTA AAGACCAAGCTGCCTCCACACTGGTGTGATAATAAATTTACTGGGATTGGTCTATGCGCTGTTATCGTATTTGATGGCTA CCACAACCAAAGGAAAAGTGTCTTATTGAAATGTAATTTTGAGTTTAAGAATGAAGACGGGTCTAGTAACCGCTTTAGCT GCACGGTTGGAGGTTGGGGCGAACCAATTGACACACCATTGAAGCCTGTGTCGTCTCATGTCTTTATCGGCTTTACCAGG AGGATGGATATCAACAAAATTAGTGAAGAGGATGATAAAGAGAAATGTGTTTCTACTAAAACCATTATTGAGTTTCAAGT GACAGATGGTATGGAAAAGATCAAAGGTTGCGAGGTGGTGAAGTGTGGCTTTAGTTTGGTATATGCACCCGAAGAAAAGA GGAATATATGTTCAGATTTAAAGACTTTTTAG |
| AA seq | Len:1344 aa MATYEKPQVSPPQVFLNFRGAELRQSFVAHLEMALIKSGVNVRNDGRMMIRGVENLFQQIEESTIALVIFSKSYTESRWC LDELVKIKELVEEGKLIAIPIFYEVSPSHVKELDGDFGLNLWNLGNRTSDFDRLKKWKEALDFISSKMGLVFNEKRNESI FIHEIVKQVQRTLTSLGVRNPVSSADCDSVGSLQEEKKQESESQSQSSSSTDPKHQVFINFRGAQLRHSFVSHLVDALER HGVSFFVDANQSKGEKLEKIFNRIEESKIALVVFSTGYTESAWCLQELVKIKELMDEGKLVAIPIFYKVEPSQVKNLTGV FGESFWNLWRIQRDSHIIKWKEAFRSIASKLGFNLSDHGGNESEFITRIVEEVLHLLSQRQGENPSLVPSTKKPKLTESP TTAEKHETYHNVGMEQLEEKLEFDSNDTRIIGIVGMAGIGKTTLAMMLHAKWNRNFLRCVPFLDIRNKSEEHGPVWLRTT LLELLLECKIGDELTHGSVKAELLKTKFFALLDDVSDKAQLKFLLGERDWIKKGSKIIITTRDKSLLEGFADDSYVVPGL NDDEAFQLFKYHAFSDKLCSPTSTFLRLSRMFVDYARGHPLTLTLLGMELNGKGADGWVSKLEMVTQRSSVMFANQLELS EKQEDMFLDIVHFFQSEDEYFVRSLLDSGDPDSTDAVSEVKDLVNKFLITTADGRVEINVPLYTFCTDPGSPRWLRLGNF EDIMKEPMKMKKTDAKNVRGIFLDTSKLEKSICLDISTFTDMRNLRYMKIYDSCCSRRCKNQDCKLYFPDGLEFPLEEVR YLHWVKFPLDELPPDFRPENLVDLRLPYSNITRVWEGEKDTPRLKWVDLSHSNELVDLSALSKAVNLQRLNLEGCTSLEE LPVEIQNMKSLVFLNLRGCISLWSLPELNLSSLKTLILSDCSNLDEFQLVSKSVEFLHLDGTAIKGLPQGIENLQRLVVL NLKNCKMLECLPNCLSNLEALDKLILSGCSKLKNLPDVKNSLKHLQVLLFDGTGAKEMPSISCFTGSEGPASGDVFLQTL GSHCSVREWPCGVNVVYSLRRLCLSGNDFLSLQPDIWKLYNLKWLDVKQCKKLRSIPMLPPRLEYFDAHGCDSLERVAKP IAFLMLSDQSHATFNFSNCNKLDRDAKDNIVSYTRWRSQLVLGELTLCSGGLVSEAPIGTCFTGWEVPAWFSHRAYGSLL KTKLPPHWCDNKFTGIGLCAVIVFDGYHNQRKSVLLKCNFEFKNEDGSSNRFSCTVGGWGEPIDTPLKPVSSHVFIGFTR RMDINKISEEDDKEKCVSTKTIIEFQVTDGMEKIKGCEVVKCGFSLVYAPEEKRNICSDLKTF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |